| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226874
Identifier: 21226874
GI number: 21226874
Start: 922435
End: 922842
Strand: Direct
Name: 21226874
Synonym: MM_0772
Alternate gene names: NA
Gene position: 922435-922842 (Clockwise)
Preceding gene: 21226872
Following gene: 21226875
Centisome position: 22.52
GC content: 41.18
Gene sequence:
>408_bases ATGAGAATACGAGTAGTAAGTTCAAGAGAAGAAATCTTTACACTTAATCCGAATGAGCGACTTGTTCACCTGGCATTCAG GCCGTCCAACAAAGATATCTTTGGACTGGTTGAAACCTGTCCGAAGATTGAGGTAATTCAGTTACCCAAATCGTATATGG CTACTGTCTCAAAGTCCATAGAAATGTTCCTTCAGATGCAGAGGGTTCAGCTCATAGAAGGGGACGTCTGGGGACACAGA AAGGACATAAACGAATATTATGCAATTCCGTCCTCAGTGATTGAAAAAATCAAGGAAATGAAAAATGAAGGAAAAGCTGC TGAGGAGATTGAGAAAAAAATTGCACGGGAAAGCAAGCTTAACCCCGGGATGGTCGCTTATATCATGAACAAAGAAGCTT CTTTCTGA
Upstream 100 bases:
>100_bases ATCTAAATAATATTAGCTTAATGAGATAACTATTTATAATAAGTGTATGTACTTCATATCAAAGAACAATCAAAAAAGAA CCTGACAGTGGGGGAAAAAT
Downstream 100 bases:
>100_bases GTTCAAATGCGAAAAAAGCTGGTGAGTCTCTTACTGGGGACTGGATAGACAGCAGCGTGCAGGCCTTATGTCATCCGGTC TCCAGCTTAAATTGATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRIRVVSSREEIFTLNPNERLVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMATVSKSIEMFLQMQRVQLIEGDVWGHR KDINEYYAIPSSVIEKIKEMKNEGKAAEEIEKKIARESKLNPGMVAYIMNKEASF
Sequences:
>Translated_135_residues MRIRVVSSREEIFTLNPNERLVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMATVSKSIEMFLQMQRVQLIEGDVWGHR KDINEYYAIPSSVIEKIKEMKNEGKAAEEIEKKIARESKLNPGMVAYIMNKEASF >Mature_135_residues MRIRVVSSREEIFTLNPNERLVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMATVSKSIEMFLQMQRVQLIEGDVWGHR KDINEYYAIPSSVIEKIKEMKNEGKAAEEIEKKIARESKLNPGMVAYIMNKEASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15618; Mature: 15618
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRVVSSREEIFTLNPNERLVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMATVSKSI CEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEHHHCCCCEEEEECCHHHHHHHHHHH EMFLQMQRVQLIEGDVWGHRKDINEYYAIPSSVIEKIKEMKNEGKAAEEIEKKIARESKL HHHHHHHHHHHHCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NPGMVAYIMNKEASF CCCEEEEEECCCCCC >Mature Secondary Structure MRIRVVSSREEIFTLNPNERLVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMATVSKSI CEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEHHHCCCCEEEEECCHHHHHHHHHHH EMFLQMQRVQLIEGDVWGHRKDINEYYAIPSSVIEKIKEMKNEGKAAEEIEKKIARESKL HHHHHHHHHHHHCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NPGMVAYIMNKEASF CCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA