| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226870
Identifier: 21226870
GI number: 21226870
Start: 916716
End: 917651
Strand: Direct
Name: 21226870
Synonym: MM_0768
Alternate gene names: NA
Gene position: 916716-917651 (Clockwise)
Preceding gene: 21226866
Following gene: 21226871
Centisome position: 22.38
GC content: 38.68
Gene sequence:
>936_bases ATGAAAAAGCATGAATTTATCAAGTATGCTAAAAAATCGATGACACATCCACTGATGATTATTTCTGCCATGAATTATTA TGGATTGTTAAAATGGTTGCCGGACAAAACACTTTTAGAAATTGATTTTAAAGCCCGCCACGGCAAAAAACTTGATCTGG ACAATCCGGTTACATATAATGAAAAACTCCAGTGGCTTAAATTATATGATAGAGATCCCGTCTATTCGCAAATGGTGGAC AAGTATGAAGTCTATCAATACGTATCCAAAAAAATTGGTAAAAAGTATTTGATACCTCTACTGGGAATATGGGATAGTGC AGATGATATCGAGTTTGATAAACTGCCGGATCAATTTGTTCTTAAACCCACTCATGACTCAGGATGTTGCGTGATCTGTA CAGATAAAGAAACATTTTCCCGGAATAAGGCAATTAAAAAACTAAATGCAGCCCTTCACCGTAATTATTATTATTCGGGA CGTGAATGGCCATATAAAGATGTAAAACCGCGTGTTATCGCCCAGAAATACATTGTAGATGAGTCCGGGTATGAATTGAA GGATTACAAAATATTTTGTTTCGATGGTGTGCCGAAACTGATTCATGTGGATTTCAACAGGTTCACGGATAATCATCAAA GGAATATTTACACTCCCTCGTGGGAATATGTCCCAATGTCGATCCTGTATCCAACATCACCTGAGACAAAAGTTGAGAAA CCGGTTGTCCTGAAAGAAATGCTGACTATTGCAAAAAATCTCTCCGCAGGAATACCGCATGTACGTGTTGATCTTTATGT AGTCGGCGAGAAAATCTATTTTGGTGAACTGACTTTTTATCATGACAGTGGGCACACAACGTTCAATCCTCCCGAGTGGG ACGAAACCATGGGTTCATGGATCAGGTTGCCAGGGAAGGTCAAGACTGCTAATTAA
Upstream 100 bases:
>100_bases AATTTAATGGCCGTAATCTATATACGTGTGATGCCTAAATTAAGTATCTTGGAAAGTCTAAAGACACCGAAATGACCCTC CATTTAAGGAGTGGAATGAT
Downstream 100 bases:
>100_bases CACAGACATAACAATTTTTCCTTATTTTTTGGATAAATTCAAAAAATATGGTAAATTTAAGAGAAAAAACAGAATGAGAC GATTTCCCAGTTTCCCACCG
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; O Antigen Biosynthesis Protein; Conserved Protein; Sugar Transferase; Polysaccharide Biosynthesis Protein; Probably Glycosyltransferase
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKKHEFIKYAKKSMTHPLMIISAMNYYGLLKWLPDKTLLEIDFKARHGKKLDLDNPVTYNEKLQWLKLYDRDPVYSQMVD KYEVYQYVSKKIGKKYLIPLLGIWDSADDIEFDKLPDQFVLKPTHDSGCCVICTDKETFSRNKAIKKLNAALHRNYYYSG REWPYKDVKPRVIAQKYIVDESGYELKDYKIFCFDGVPKLIHVDFNRFTDNHQRNIYTPSWEYVPMSILYPTSPETKVEK PVVLKEMLTIAKNLSAGIPHVRVDLYVVGEKIYFGELTFYHDSGHTTFNPPEWDETMGSWIRLPGKVKTAN
Sequences:
>Translated_311_residues MKKHEFIKYAKKSMTHPLMIISAMNYYGLLKWLPDKTLLEIDFKARHGKKLDLDNPVTYNEKLQWLKLYDRDPVYSQMVD KYEVYQYVSKKIGKKYLIPLLGIWDSADDIEFDKLPDQFVLKPTHDSGCCVICTDKETFSRNKAIKKLNAALHRNYYYSG REWPYKDVKPRVIAQKYIVDESGYELKDYKIFCFDGVPKLIHVDFNRFTDNHQRNIYTPSWEYVPMSILYPTSPETKVEK PVVLKEMLTIAKNLSAGIPHVRVDLYVVGEKIYFGELTFYHDSGHTTFNPPEWDETMGSWIRLPGKVKTAN >Mature_311_residues MKKHEFIKYAKKSMTHPLMIISAMNYYGLLKWLPDKTLLEIDFKARHGKKLDLDNPVTYNEKLQWLKLYDRDPVYSQMVD KYEVYQYVSKKIGKKYLIPLLGIWDSADDIEFDKLPDQFVLKPTHDSGCCVICTDKETFSRNKAIKKLNAALHRNYYYSG REWPYKDVKPRVIAQKYIVDESGYELKDYKIFCFDGVPKLIHVDFNRFTDNHQRNIYTPSWEYVPMSILYPTSPETKVEK PVVLKEMLTIAKNLSAGIPHVRVDLYVVGEKIYFGELTFYHDSGHTTFNPPEWDETMGSWIRLPGKVKTAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36581; Mature: 36581
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHEFIKYAKKSMTHPLMIISAMNYYGLLKWLPDKTLLEIDFKARHGKKLDLDNPVTYN CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC EKLQWLKLYDRDPVYSQMVDKYEVYQYVSKKIGKKYLIPLLGIWDSADDIEFDKLPDQFV CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCCCCCCHHCCCCCEE LKPTHDSGCCVICTDKETFSRNKAIKKLNAALHRNYYYSGREWPYKDVKPRVIAQKYIVD EEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHEEC ESGYELKDYKIFCFDGVPKLIHVDFNRFTDNHQRNIYTPSWEYVPMSILYPTSPETKVEK CCCCEEECEEEEEECCCCEEEEEEHHHCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCC PVVLKEMLTIAKNLSAGIPHVRVDLYVVGEKIYFGELTFYHDSGHTTFNPPEWDETMGSW CHHHHHHHHHHHHHCCCCCEEEEEEEEEECEEEEEEEEEEECCCCCCCCCCCHHHHHHHH IRLPGKVKTAN EECCCEEECCC >Mature Secondary Structure MKKHEFIKYAKKSMTHPLMIISAMNYYGLLKWLPDKTLLEIDFKARHGKKLDLDNPVTYN CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC EKLQWLKLYDRDPVYSQMVDKYEVYQYVSKKIGKKYLIPLLGIWDSADDIEFDKLPDQFV CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCCCCCCHHCCCCCEE LKPTHDSGCCVICTDKETFSRNKAIKKLNAALHRNYYYSGREWPYKDVKPRVIAQKYIVD EEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHEEC ESGYELKDYKIFCFDGVPKLIHVDFNRFTDNHQRNIYTPSWEYVPMSILYPTSPETKVEK CCCCEEECEEEEEECCCCEEEEEEHHHCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCC PVVLKEMLTIAKNLSAGIPHVRVDLYVVGEKIYFGELTFYHDSGHTTFNPPEWDETMGSW CHHHHHHHHHHHHHCCCCCEEEEEEEEEECEEEEEEEEEEECCCCCCCCCCCHHHHHHHH IRLPGKVKTAN EECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA