| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226866
Identifier: 21226866
GI number: 21226866
Start: 912211
End: 912621
Strand: Direct
Name: 21226866
Synonym: MM_0764
Alternate gene names: NA
Gene position: 912211-912621 (Clockwise)
Preceding gene: 21226865
Following gene: 21226870
Centisome position: 22.27
GC content: 53.28
Gene sequence:
>411_bases ATGTCCCGAAAGCCGGTGACCGTAAAAACAGAGTCTCAATACATCGTTAAAGCCGACAGGGAACTGGCTGAGCTCCTGGG GGTAGAAGAAGGAAGCGAAATAAACAACAGGACAGTCAGGCTTTACGCAGGAGACACGGTTTTTGTGCACGCAAAGTCTC TCTCCCCTCTGGAGCGTATGCCCCAGACCATGCGTGACCAGCTCATGCGGGCAGACATCCCTATCGGCAGGATCCTGCGC ACCCACAACCTTGAAACCAGGCGGGACATGGTAGAGTTAGAGATTCTTGAGGGCGAACCCACCTTTGACGGGATCCCTAT CCTTTCCCGCACCTACAAAATCGTCCACAATAACCACGTCCTCATGTGGATCAACGAGCGCTTCCCTATAGATGCGCGCT GGAAACTCTAA
Upstream 100 bases:
>100_bases GGAAGGAGATTTCCTTGAAAAACTGAAAAGCCTTGAAATTCCCACCTGCCTCCGGGTCTGCTGTGGGACTGACGGTTCCG TAACCTTTCTTCTGGAAATA
Downstream 100 bases:
>100_bases AAAGCCAGGCTTTCAAAAACCAACTGTAGAAGAAACAGGCAATTTTTCCTGCCAGTTTCCCAATTTTTTCAAGCAAAATC CCCGGATTTTTAGCCAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: 4-Hydroxybenzoate Synthetase; Beta-Ribofuranosylaminobenzene 5-Phosphate Synthase Family
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSRKPVTVKTESQYIVKADRELAELLGVEEGSEINNRTVRLYAGDTVFVHAKSLSPLERMPQTMRDQLMRADIPIGRILR THNLETRRDMVELEILEGEPTFDGIPILSRTYKIVHNNHVLMWINERFPIDARWKL
Sequences:
>Translated_136_residues MSRKPVTVKTESQYIVKADRELAELLGVEEGSEINNRTVRLYAGDTVFVHAKSLSPLERMPQTMRDQLMRADIPIGRILR THNLETRRDMVELEILEGEPTFDGIPILSRTYKIVHNNHVLMWINERFPIDARWKL >Mature_135_residues SRKPVTVKTESQYIVKADRELAELLGVEEGSEINNRTVRLYAGDTVFVHAKSLSPLERMPQTMRDQLMRADIPIGRILRT HNLETRRDMVELEILEGEPTFDGIPILSRTYKIVHNNHVLMWINERFPIDARWKL
Specific function: Unknown
COG id: COG3161
COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15868; Mature: 15736
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKPVTVKTESQYIVKADRELAELLGVEEGSEINNRTVRLYAGDTVFVHAKSLSPLERM CCCCCEEEEECCEEEEECHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHC PQTMRDQLMRADIPIGRILRTHNLETRRDMVELEILEGEPTFDGIPILSRTYKIVHNNHV HHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHEEEEEECCEE LMWINERFPIDARWKL EEEECCCCCCCEEECC >Mature Secondary Structure SRKPVTVKTESQYIVKADRELAELLGVEEGSEINNRTVRLYAGDTVFVHAKSLSPLERM CCCCEEEEECCEEEEECHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHC PQTMRDQLMRADIPIGRILRTHNLETRRDMVELEILEGEPTFDGIPILSRTYKIVHNNHV HHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHEEEEEECCEE LMWINERFPIDARWKL EEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA