| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226856
Identifier: 21226856
GI number: 21226856
Start: 903977
End: 904537
Strand: Direct
Name: 21226856
Synonym: MM_0754
Alternate gene names: NA
Gene position: 903977-904537 (Clockwise)
Preceding gene: 21226855
Following gene: 21226857
Centisome position: 22.07
GC content: 44.39
Gene sequence:
>561_bases ATGAAGTGTATTATTTTACCCGAAAAACTTGACTACGACGGAAGCCAGATTTCTTCCCTGTGGGCTTATAGCAGCTTTGG AGTGCAGGAAGATTCAGTTATTGTTTTTAGAGGTGCGTGTGACGTTAAAATCGAGCATATGATTGACCTTGAAGACCGGA GAGCAAACGAGTCTATCTGGTCTGAAGACATGCTGAGTTTCATAATAGAACATTTCGATTCCACCGACATGAAACTGATT TATTCACGCCAGCGCCTGTTTACTGCAATAGTCAGAGAATACCTTGAAGAGCTTGGGATCAACACTTCAAGAGCAGGAGA CGACCTGTTTTTTAAAGGAAAGAAGCTGACCGTATCTATTGCCAGCACCTCGGCTATTTCCCAGAAAATCCATTTCGGCA TTAACGTCTCGCATGAGGTATACGGAAACCTGAAAGAAGCCGGAATTGAGGGCGAGGAAAATATTGTACGGCTGATGCAG GGTATCGGGGAAGCTTATGTAAGTGAATTTGGGGATATAGAAAAGGACCTCAGGAAGTCCAGACCTCTCGGAGTGGCGTA A
Upstream 100 bases:
>100_bases CAGGGAGTATGAACAAATTGGGAATTATGAATATTACGGCACTGCTGAGATCCGGTAGAGAAAATAAAGAAACAATTTTA GAGATTGCAGAGAGAGTTCC
Downstream 100 bases:
>100_bases ATGTCATCTTCAAACCATGAACCCGCTAACTTAAGAGAAGTCTTCTGTTCCGTGCAGGGAGAAGGCCCGTATGTCGGCAT GAGGCAGGCTTTTGTCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKCIILPEKLDYDGSQISSLWAYSSFGVQEDSVIVFRGACDVKIEHMIDLEDRRANESIWSEDMLSFIIEHFDSTDMKLI YSRQRLFTAIVREYLEELGINTSRAGDDLFFKGKKLTVSIASTSAISQKIHFGINVSHEVYGNLKEAGIEGEENIVRLMQ GIGEAYVSEFGDIEKDLRKSRPLGVA
Sequences:
>Translated_186_residues MKCIILPEKLDYDGSQISSLWAYSSFGVQEDSVIVFRGACDVKIEHMIDLEDRRANESIWSEDMLSFIIEHFDSTDMKLI YSRQRLFTAIVREYLEELGINTSRAGDDLFFKGKKLTVSIASTSAISQKIHFGINVSHEVYGNLKEAGIEGEENIVRLMQ GIGEAYVSEFGDIEKDLRKSRPLGVA >Mature_186_residues MKCIILPEKLDYDGSQISSLWAYSSFGVQEDSVIVFRGACDVKIEHMIDLEDRRANESIWSEDMLSFIIEHFDSTDMKLI YSRQRLFTAIVREYLEELGINTSRAGDDLFFKGKKLTVSIASTSAISQKIHFGINVSHEVYGNLKEAGIEGEENIVRLMQ GIGEAYVSEFGDIEKDLRKSRPLGVA
Specific function: Unknown
COG id: COG2029
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007162 - ProDom: PD022700 [H]
Pfam domain/function: PF04017 DUF366 [H]
EC number: NA
Molecular weight: Translated: 21023; Mature: 21023
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCIILPEKLDYDGSQISSLWAYSSFGVQEDSVIVFRGACDVKIEHMIDLEDRRANESIW CEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCHHHCCCHHHH SEDMLSFIIEHFDSTDMKLIYSRQRLFTAIVREYLEELGINTSRAGDDLFFKGKKLTVSI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEE ASTSAISQKIHFGINVSHEVYGNLKEAGIEGEENIVRLMQGIGEAYVSEFGDIEKDLRKS CCHHHHHHHHHCCCCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPLGVA CCCCCC >Mature Secondary Structure MKCIILPEKLDYDGSQISSLWAYSSFGVQEDSVIVFRGACDVKIEHMIDLEDRRANESIW CEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCHHHCCCHHHH SEDMLSFIIEHFDSTDMKLIYSRQRLFTAIVREYLEELGINTSRAGDDLFFKGKKLTVSI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEE ASTSAISQKIHFGINVSHEVYGNLKEAGIEGEENIVRLMQGIGEAYVSEFGDIEKDLRKS CCHHHHHHHHHCCCCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPLGVA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]