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The map label for this gene is glnB [C]

Identifier: 21226823

GI number: 21226823

Start: 867310

End: 867702

Strand: Direct

Name: glnB [C]

Synonym: MM_0721

Alternate gene names: 21226823

Gene position: 867310-867702 (Clockwise)

Preceding gene: 21226822

Following gene: 21226824

Centisome position: 21.17

GC content: 45.8

Gene sequence:

>393_bases
TTGGAGGAAAAATCCGTGAAAGAGATTACGGCAATAATCAGGATGAACAGAGTCCAGAAAACCAAGGATGTCCTCCTTGA
ATGCGGCTTTCCCTCCTTTACCGTGAGAAGGGTGATGGGCCGCGGAAAACAGAAAGGACTCTGCTTTGAATTTAACCCAC
CTCTGCCAGAACCTGAAAAGGAAGCAGAGACCTGTATTCACTTCATTCCAAAACGCATGTTCACCATTGTGGTGGATGAT
GAAAATGTAAACGAAGTGGTTCGGAAAATTATAGAGGTAAACCAGACCGGACATCCGGGAGACGGAAAAATATTCGTATC
AAGTATCAGCGAAGCATACCGCATAAGGACCGGAGAAAGCGGAGAAGCAACCGTGAATAAGGAGATGGTGTGA

Upstream 100 bases:

>100_bases
AGCCAGGACCGGAAAATACGGAGACGGAAGAATATTCGTAAACCCGGTTGAAGAAGCCTACACCATAAGGACTGGAAAGC
CCGGACTTTGAGCCGGATTT

Downstream 100 bases:

>100_bases
TATGGGAGCGGAAATTAACTCTGAGATTGGAGACAAACAGCAGCTTGTTGAAAATATGATGAAAGCGCTCCCGGAAAAGG
CTGCAAGAAACAGGAGAAAA

Product: NifI(2), GlnB-like protein

Products: NA

Alternate protein names: ORF-125 [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MEEKSVKEITAIIRMNRVQKTKDVLLECGFPSFTVRRVMGRGKQKGLCFEFNPPLPEPEKEAETCIHFIPKRMFTIVVDD
ENVNEVVRKIIEVNQTGHPGDGKIFVSSISEAYRIRTGESGEATVNKEMV

Sequences:

>Translated_130_residues
MEEKSVKEITAIIRMNRVQKTKDVLLECGFPSFTVRRVMGRGKQKGLCFEFNPPLPEPEKEAETCIHFIPKRMFTIVVDD
ENVNEVVRKIIEVNQTGHPGDGKIFVSSISEAYRIRTGESGEATVNKEMV
>Mature_130_residues
MEEKSVKEITAIIRMNRVQKTKDVLLECGFPSFTVRRVMGRGKQKGLCFEFNPPLPEPEKEAETCIHFIPKRMFTIVVDD
ENVNEVVRKIIEVNQTGHPGDGKIFVSSISEAYRIRTGESGEATVNKEMV

Specific function: Could be involved in the regulation of nitrogen fixation [H]

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=120, Percent_Identity=39.1666666666667, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1786655, Length=120, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 14756; Mature: 14756

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00638 PII_GLNB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKSVKEITAIIRMNRVQKTKDVLLECGFPSFTVRRVMGRGKQKGLCFEFNPPLPEPEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCHH
EAETCIHFIPKRMFTIVVDDENVNEVVRKIIEVNQTGHPGDGKIFVSSISEAYRIRTGES
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCC
GEATVNKEMV
CCCCCCCCCC
>Mature Secondary Structure
MEEKSVKEITAIIRMNRVQKTKDVLLECGFPSFTVRRVMGRGKQKGLCFEFNPPLPEPEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCHH
EAETCIHFIPKRMFTIVVDDENVNEVVRKIIEVNQTGHPGDGKIFVSSISEAYRIRTGES
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCC
GEATVNKEMV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2068380; 7961410 [H]