| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yceA [C]
Identifier: 21226452
GI number: 21226452
Start: 457470
End: 458210
Strand: Direct
Name: yceA [C]
Synonym: MM_0350
Alternate gene names: 21226452
Gene position: 457470-458210 (Clockwise)
Preceding gene: 21226451
Following gene: 21226453
Centisome position: 11.17
GC content: 44.26
Gene sequence:
>741_bases ATGATCATTCCGGGAATTGCCGCCGCAGAGACCTGTCCAGATGGATATAAAAATGTGAGTGTTTGTAAAGCTGAAAAGAT GGTCGAAAAAGAAGACGTATTTCTTCTGGATGTGCGTACTCCTGCTGAATTTAATAAAACACATATTGAGGGCACGATAC TTATTCCTGTGAAAAATGTACCTGCACAGGACCCTGTAGAATTATCCTCTGATGAACTGCTGGAAGTGAGAATAAATGAA GTGCCAGCCGATGAAAAAATACTTGTTTACTGCAAGAGTGGTGCCAGAAGTGCCGCTGCATGCAGTTTACTTGTCAGCAA CGGATACAGGAAAGTCTATAATATGAGAGGAGGCATTGACTGCTGGTTAGCCAGAGGGTGTACTGTAGATGTAAACGCCG ATAAAGCTGATGAACTGCTCGGTACAGGGGAGTTCTTCCTTCTGGATGTGCGCACTCCGGCTGAATTTAATGCAGGGTAT ATTGAGGGGGCAATATTGATTCCACTGAAAAATGTTCCAAAGGAAGACCCGGTTGAATTACCCCCGGAAAAGCTCTTAGC TCAATGCCTCTGTGAAATTCCGGAAAATAAGCCTATTCTGGTTTATTGCAAGAGTGGGACAAGAAGCGATGCTGCAAGAG ATTTACTGGTAGATTCAGGTTACAGGCATGTCTATAATTTGGAAGGCGGCATCCTCACCTGGAAAGCTGAGGGATACCCT ACAGTTTGTCCAGCTATTTGA
Upstream 100 bases:
>100_bases ACTTTCAGGTTTATGAATTTAATGAATTACAGAATGTGGAGGGATGTAACTGAATAAACGAACTATGTTTTATTTTGCTG CGGTCCTTATGGCATTTCTC
Downstream 100 bases:
>100_bases GATTAAAAAACTCTTCAATTTTTTCCTTTTTTATATTTTTATAATCCTTTTCCTAATCCTTTTCCTTTTTACTTTTTAAA GATTTTTTATCCGAAGTATA
Product: putative molybdopterin biosynthesis protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Domain-Containing Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Rhodanese-Like Protein; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Rhodanese-Like Domain Protein; Metallo-Beta-Lactamase Family Protein; Rhodanese Family Protein; Hydrolase; Phage Prohead Protease; Phage Shock Protein; Rhodanese Homology Domain Superfamily Protein; Sulfur Transferase Selenocysteine-Containing; Phage Shock Protein E; Pyridine Nucleotide Oxidoreductase; Rhodanese-Like Family Protein; Molybdopterin Biosynthesis Protein; Metallo-Beta-Lactamase Superfamily Protein; Thioredoxin; Rhodanese-Related Sulfurtransferase; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNVPAQDPVELSSDELLEVRINE VPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGIDCWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGY IEGAILIPLKNVPKEDPVELPPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP TVCPAI
Sequences:
>Translated_246_residues MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNVPAQDPVELSSDELLEVRINE VPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGIDCWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGY IEGAILIPLKNVPKEDPVELPPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP TVCPAI >Mature_246_residues MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNVPAQDPVELSSDELLEVRINE VPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGIDCWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGY IEGAILIPLKNVPKEDPVELPPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP TVCPAI
Specific function: Unknown. [C]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26872; Mature: 26872
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECEEEEEEECCC PAQDPVELSSDELLEVRINEVPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGID CCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEHHCCCCEE CWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGYIEGAILIPLKNVPKEDPVEL EEEECCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCCCCC PPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP CHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECCCCC TVCPAI CCCCCC >Mature Secondary Structure MIIPGIAAAETCPDGYKNVSVCKAEKMVEKEDVFLLDVRTPAEFNKTHIEGTILIPVKNV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECEEEEEEECCC PAQDPVELSSDELLEVRINEVPADEKILVYCKSGARSAAACSLLVSNGYRKVYNMRGGID CCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEHHCCCCEE CWLARGCTVDVNADKADELLGTGEFFLLDVRTPAEFNAGYIEGAILIPLKNVPKEDPVEL EEEECCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCCCCC PPEKLLAQCLCEIPENKPILVYCKSGTRSDAARDLLVDSGYRHVYNLEGGILTWKAEGYP CHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECCCCC TVCPAI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA