Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226453

Identifier: 21226453

GI number: 21226453

Start: 458507

End: 459502

Strand: Direct

Name: 21226453

Synonym: MM_0351

Alternate gene names: NA

Gene position: 458507-459502 (Clockwise)

Preceding gene: 21226452

Following gene: 21226454

Centisome position: 11.19

GC content: 45.88

Gene sequence:

>996_bases
ATGGAGCAGGAAACTCAGACAGCAGGAGCAAAAAAGGCTTCCTCCAGGGAAAAAGCCGGTTCGCAAGCATACAGCATACG
GGAAAAAATGTCCTCTTCAGCTTCACCTTTCCCGTATCTTGCCCCTGCGTTTGCTCCAGTTTCGTTTCCTGCTCCCGAAT
ACCTGTTTTATTCTCCGACGCTTCTTCAGCTCGACCTTAATATCTACCGGGAGCCTGTAATAAAATCCCTCATTAAAAAG
CATAGCGAAGACCTTTACAGGCTTATAAAAAAGACACATTTTGACGGAAAATATTATCAGGTAAAAAGCGTGCGTTCAGG
GGGATGGGAATACTGCTGGGAACTGGCAGTCAGAGTAGAGTTTTTCGGAAAGCTTCAGGGTCTGGCTTTCGAACCTGAAA
GGGTCATTTCCAGAAAAAGGAAGAAAATAACCTTCAGGTACCTCATCCTGGTAAATCCCCATGAACTGTGGGACGAAGAA
CTGGTAGAAAGGTTGTGGAACATTCAGGAGAGGATCGAGTTTCTGACGGCAAAAATCCTCTTTCACGAATGCATCCATGT
CTTTATTTCACTGGAAAAAACCCTGCCATCAGGTCTTGGGCAGACGGATATTTCTCTCGAGTTCAGGGAAGTGCTTGAGT
TTGCAAATTCCGGAAAACTCTGCCCTGAAAGTTATGGGGTCAAGCTTCACATCCAGAATCTGTCTGCTCTTTCCCCAGCT
TCTCCCGAAAGCTCTGCAGGAAAGCCGGGCATTGTTTCCGAAATCTATGAGTTCCTGATCCACGAAAAGTACAGCATCAA
AAAAACCGATCAGGCTTTCGGTTTTTCCTGGAGCAACCGGAAAATTTCACGCAACTATGCCCGGATGGCTGCCCTTAAAA
TGGCTCCGTGTTCGGATTCCAATAAAAAAGACTGGGAGAGGGAAGTTTTCAGGCTGAGCAGGGATGTGGAGGAACTGTAT
GACAGAATTGACAGCACTTACGTTTTCCTATTATAA

Upstream 100 bases:

>100_bases
TTTAAATTCAATATTATTTGTTATTACCTAAATTAAAAATAGTAATACGAATTGAATCAGTAATACGGGGAAAAAAGGGT
CGATTAACAGGGGTGTCTTA

Downstream 100 bases:

>100_bases
GGAAGCACTTACGTTTTCTTATTATAAGGAAGCACTTACGTTTTCTTATTATAAGTTACTCCTTTTAATGCACATCTTCC
CTCCTTCTTCCGAAAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPTLLQLDLNIYREPVIKSLIKK
HSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVEFFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEE
LVERLWNIQERIEFLTAKILFHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA
SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDSNKKDWEREVFRLSRDVEELY
DRIDSTYVFLL

Sequences:

>Translated_331_residues
MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPTLLQLDLNIYREPVIKSLIKK
HSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVEFFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEE
LVERLWNIQERIEFLTAKILFHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA
SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDSNKKDWEREVFRLSRDVEELY
DRIDSTYVFLL
>Mature_331_residues
MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPTLLQLDLNIYREPVIKSLIKK
HSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVEFFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEE
LVERLWNIQERIEFLTAKILFHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA
SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDSNKKDWEREVFRLSRDVEELY
DRIDSTYVFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38314; Mature: 38314

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPT
CCCCHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCE
LLQLDLNIYREPVIKSLIKKHSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVE
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHH
FFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEELVERLWNIQERIEFLTAKIL
HHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHH
FHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC
SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
NKKDWEREVFRLSRDVEELYDRIDSTYVFLL
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPT
CCCCHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCE
LLQLDLNIYREPVIKSLIKKHSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVE
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHH
FFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEELVERLWNIQERIEFLTAKIL
HHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHH
FHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC
SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
NKKDWEREVFRLSRDVEELYDRIDSTYVFLL
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA