| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226453
Identifier: 21226453
GI number: 21226453
Start: 458507
End: 459502
Strand: Direct
Name: 21226453
Synonym: MM_0351
Alternate gene names: NA
Gene position: 458507-459502 (Clockwise)
Preceding gene: 21226452
Following gene: 21226454
Centisome position: 11.19
GC content: 45.88
Gene sequence:
>996_bases ATGGAGCAGGAAACTCAGACAGCAGGAGCAAAAAAGGCTTCCTCCAGGGAAAAAGCCGGTTCGCAAGCATACAGCATACG GGAAAAAATGTCCTCTTCAGCTTCACCTTTCCCGTATCTTGCCCCTGCGTTTGCTCCAGTTTCGTTTCCTGCTCCCGAAT ACCTGTTTTATTCTCCGACGCTTCTTCAGCTCGACCTTAATATCTACCGGGAGCCTGTAATAAAATCCCTCATTAAAAAG CATAGCGAAGACCTTTACAGGCTTATAAAAAAGACACATTTTGACGGAAAATATTATCAGGTAAAAAGCGTGCGTTCAGG GGGATGGGAATACTGCTGGGAACTGGCAGTCAGAGTAGAGTTTTTCGGAAAGCTTCAGGGTCTGGCTTTCGAACCTGAAA GGGTCATTTCCAGAAAAAGGAAGAAAATAACCTTCAGGTACCTCATCCTGGTAAATCCCCATGAACTGTGGGACGAAGAA CTGGTAGAAAGGTTGTGGAACATTCAGGAGAGGATCGAGTTTCTGACGGCAAAAATCCTCTTTCACGAATGCATCCATGT CTTTATTTCACTGGAAAAAACCCTGCCATCAGGTCTTGGGCAGACGGATATTTCTCTCGAGTTCAGGGAAGTGCTTGAGT TTGCAAATTCCGGAAAACTCTGCCCTGAAAGTTATGGGGTCAAGCTTCACATCCAGAATCTGTCTGCTCTTTCCCCAGCT TCTCCCGAAAGCTCTGCAGGAAAGCCGGGCATTGTTTCCGAAATCTATGAGTTCCTGATCCACGAAAAGTACAGCATCAA AAAAACCGATCAGGCTTTCGGTTTTTCCTGGAGCAACCGGAAAATTTCACGCAACTATGCCCGGATGGCTGCCCTTAAAA TGGCTCCGTGTTCGGATTCCAATAAAAAAGACTGGGAGAGGGAAGTTTTCAGGCTGAGCAGGGATGTGGAGGAACTGTAT GACAGAATTGACAGCACTTACGTTTTCCTATTATAA
Upstream 100 bases:
>100_bases TTTAAATTCAATATTATTTGTTATTACCTAAATTAAAAATAGTAATACGAATTGAATCAGTAATACGGGGAAAAAAGGGT CGATTAACAGGGGTGTCTTA
Downstream 100 bases:
>100_bases GGAAGCACTTACGTTTTCTTATTATAAGGAAGCACTTACGTTTTCTTATTATAAGTTACTCCTTTTAATGCACATCTTCC CTCCTTCTTCCGAAAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPTLLQLDLNIYREPVIKSLIKK HSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVEFFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEE LVERLWNIQERIEFLTAKILFHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDSNKKDWEREVFRLSRDVEELY DRIDSTYVFLL
Sequences:
>Translated_331_residues MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPTLLQLDLNIYREPVIKSLIKK HSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVEFFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEE LVERLWNIQERIEFLTAKILFHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDSNKKDWEREVFRLSRDVEELY DRIDSTYVFLL >Mature_331_residues MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPTLLQLDLNIYREPVIKSLIKK HSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVEFFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEE LVERLWNIQERIEFLTAKILFHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDSNKKDWEREVFRLSRDVEELY DRIDSTYVFLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38314; Mature: 38314
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPT CCCCHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCE LLQLDLNIYREPVIKSLIKKHSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVE EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHH FFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEELVERLWNIQERIEFLTAKIL HHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHH FHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDS CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC NKKDWEREVFRLSRDVEELYDRIDSTYVFLL CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure MEQETQTAGAKKASSREKAGSQAYSIREKMSSSASPFPYLAPAFAPVSFPAPEYLFYSPT CCCCHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCE LLQLDLNIYREPVIKSLIKKHSEDLYRLIKKTHFDGKYYQVKSVRSGGWEYCWELAVRVE EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHH FFGKLQGLAFEPERVISRKRKKITFRYLILVNPHELWDEELVERLWNIQERIEFLTAKIL HHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHH FHECIHVFISLEKTLPSGLGQTDISLEFREVLEFANSGKLCPESYGVKLHIQNLSALSPA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC SPESSAGKPGIVSEIYEFLIHEKYSIKKTDQAFGFSWSNRKISRNYARMAALKMAPCSDS CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC NKKDWEREVFRLSRDVEELYDRIDSTYVFLL CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA