| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is rpl37e [H]
Identifier: 21226442
GI number: 21226442
Start: 447995
End: 448165
Strand: Direct
Name: rpl37e [H]
Synonym: MM_0340
Alternate gene names: 21226442
Gene position: 447995-448165 (Clockwise)
Preceding gene: 21226441
Following gene: 21226443
Centisome position: 10.94
GC content: 47.95
Gene sequence:
>171_bases ATGAGTAAAGGTACGGCTTCAATGGGAAAAAGGCAGAAGCGCACCCACGCCAAATGCAGGCGCTGCGGCAGCGTTTCGTT AAACGTGCATACAAAACAGTGTACTTCATGCGGCTTTGGAAAGACATCCCGTATGAGAACTTACAAGTGGCAGGCAAAGT GCAAATACTAA
Upstream 100 bases:
>100_bases GCAGCAAGATCTGTAGAGCTGGGATGAATTCAGAAAAACGAAATCGCTTCGAATTATCGAATATTACATGCTAGATTGAT TTTTATCAGGAGATTTGAGA
Downstream 100 bases:
>100_bases ACCTGCCTGCTCAATTTTCTCTATTTTTTACCTGCACCGGAGGTCAAAATTGAAAGAAGAGTGCGGGGTTGCAGGCATAA TTTTGCCTGATGACAGACCC
Product: 50S ribosomal protein L37e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSKGTASMGKRQKRTHAKCRRCGSVSLNVHTKQCTSCGFGKTSRMRTYKWQAKCKY
Sequences:
>Translated_56_residues MSKGTASMGKRQKRTHAKCRRCGSVSLNVHTKQCTSCGFGKTSRMRTYKWQAKCKY >Mature_55_residues SKGTASMGKRQKRTHAKCRRCGSVSLNVHTKQCTSCGFGKTSRMRTYKWQAKCKY
Specific function: Binds to the 23S rRNA [H]
COG id: COG2126
COG function: function code J; Ribosomal protein L37E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L37e family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011331 - InterPro: IPR001569 - InterPro: IPR018267 - InterPro: IPR011332 - ProDom: PD005132 [H]
Pfam domain/function: PF01907 Ribosomal_L37e [H]
EC number: NA
Molecular weight: Translated: 6390; Mature: 6258
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: PS01077 RIBOSOMAL_L37E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 9.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 12.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGTASMGKRQKRTHAKCRRCGSVSLNVHTKQCTSCGFGKTSRMRTYKWQAKCKY CCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure SKGTASMGKRQKRTHAKCRRCGSVSLNVHTKQCTSCGFGKTSRMRTYKWQAKCKY CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]