| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226184
Identifier: 21226184
GI number: 21226184
Start: 109130
End: 109408
Strand: Reverse
Name: 21226184
Synonym: MM_0082
Alternate gene names: NA
Gene position: 109408-109130 (Counterclockwise)
Preceding gene: 21226185
Following gene: 21226183
Centisome position: 2.67
GC content: 47.31
Gene sequence:
>279_bases ATGACATCAAGCCGTTTTATTATCACGGTCATTGGCAGTGACAGAGTAGGAATTGTTGCCAGGATCACCACTGTAATGGC CAGTTACAACGTGAATATTGTCGACATCAGCCAGACCATCATGCAGGGCATCTTTACAATGATTATGCTCGCAGAAGCCC CGAAGGAAAACTTTGACCTTGCAGCTTTCCAGCAGGCTATGGACGCCGAAGGCAAAAGCCTTGGAGTTGAGGTCAAAGTT CAGCATGAAGACGCTTTCCGTTTCATGCACAGGATCTGA
Upstream 100 bases:
>100_bases TTACTTTATTATCTATCAGGTCTTCAATCTCGACAAAATTCTTTGCTTACAGTTTTCATACACCGACCTGCAGACAAGCA GGCTTATCAGGAGATATTTC
Downstream 100 bases:
>100_bases TTTTTCAGGAAGGGAGGATTTTTTTCATGCTTATAAACCCTAAAGAAATCCTGGAGACAATCCAGATGGTCAGGATGGAA CATCTGGACATCAGGACCGT
Product: hypothetical protein
Products: L-serine; D-serine; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTSSRFIITVIGSDRVGIVARITTVMASYNVNIVDISQTIMQGIFTMIMLAEAPKENFDLAAFQQAMDAEGKSLGVEVKV QHEDAFRFMHRI
Sequences:
>Translated_92_residues MTSSRFIITVIGSDRVGIVARITTVMASYNVNIVDISQTIMQGIFTMIMLAEAPKENFDLAAFQQAMDAEGKSLGVEVKV QHEDAFRFMHRI >Mature_91_residues TSSRFIITVIGSDRVGIVARITTVMASYNVNIVDISQTIMQGIFTMIMLAEAPKENFDLAAFQQAMDAEGKSLGVEVKVQ HEDAFRFMHRI
Specific function: Unknown
COG id: COG3830
COG function: function code T; ACT domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y082_METMA (Q8Q0Q4)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632106.1 - ProteinModelPortal: Q8Q0Q4 - SMR: Q8Q0Q4 - GeneID: 1478424 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0082 - NMPDR: fig|192952.1.peg.82 - HOGENOM: HBG305002 - OMA: FTMIMLV - ProtClustDB: PRK00194 - BioCyc: MMAZ192952:MM0082-MONOMER - HAMAP: MF_01054 - InterPro: IPR002912 - InterPro: IPR022986
Pfam domain/function: PF01842 ACT
EC number: 3.1.3.3
Molecular weight: Translated: 10254; Mature: 10123
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSRFIITVIGSDRVGIVARITTVMASYNVNIVDISQTIMQGIFTMIMLAEAPKENFDL CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCH AAFQQAMDAEGKSLGVEVKVQHEDAFRFMHRI HHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCC >Mature Secondary Structure TSSRFIITVIGSDRVGIVARITTVMASYNVNIVDISQTIMQGIFTMIMLAEAPKENFDL CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCH AAFQQAMDAEGKSLGVEVKVQHEDAFRFMHRI HHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O
Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824