Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226183

Identifier: 21226183

GI number: 21226183

Start: 107742

End: 109103

Strand: Reverse

Name: 21226183

Synonym: MM_0081

Alternate gene names: NA

Gene position: 109103-107742 (Counterclockwise)

Preceding gene: 21226184

Following gene: 21226182

Centisome position: 2.66

GC content: 48.68

Gene sequence:

>1362_bases
ATGCTTATAAACCCTAAAGAAATCCTGGAGACAATCCAGATGGTCAGGATGGAACATCTGGACATCAGGACCGTTACCAT
GGGGATCAGCCTCAGGGACTGCAGCCACCCTGATATTGAGATATTTAACGAAAATATCTACGCGAAAATAACCTCGCGGG
CAAAAGACCTTGTCCGGACGACAAATGAAATCCAGAGCCTTTACGGGATCCCTATCATCAACCGCAGGATTTCTGTGACC
CCCATAGCGATAGCAGCAGAAAGCTGCAGGTCTCGGGACTTTGTATCTATTGCAAAGACGATGGACGAAGCTGCAAAAGA
AGCAGGTGTCGATTTTATCGGCGGGTTCAGTGCCCTTGTCCATAAAGGGGAAACTGGCGGGGACCTGAAATTAATAAATT
CCATTCCTGAAGCTCTTGCATCTACAGAAAAGGTCTGCTCGTCCGTTAATGTTGCAACCACAAAGGCGGGAATTAACATG
GATGCAGTCGGACTTATGGGAAAAGTAATCAAAAAGACTGCGGAACTGACCTCTGACAGAGATGGGATAGGCTGTGCTAA
ACTCGTGGTTTTTGCAAATGCTCCTGATGACAACCCTTTTATGGCAGGAGCTTTTCACGGAATTGGGGAACCCGAATGTG
TAATTAATGTGGGCGTAAGCGGGCCTGGCGTGGTTAACGCAGCTGTTTGCGAGCTCGAAAACCCTGACCTCACGGAGATT
TCCGAGACAATCAAAAGGACAGCCTTTAAAATTACGCGTATGGGAGAAATGGTCGGAAGAGAGGTCTCAAGAAGGCTCGG
CGTTGAATTCGGGATTCTCGACCTTTCGCTTGCTCCAACTCCGGCGATCGGGGACAGTGTTGCAGCAATTCTGGAAGCTA
TGGGCCTTGAACGGTGTGGAGCCCATGGCACGACTGCAGCCCTTGCACTTCTTAATGATGCCGTAAAAAAAGGAGGAGCA
ATGGCTTCTTCTTCAGTGGGAGGTCTCAGCGGGGCTTTCATTCCTGTAAGTGAAGATGCAGGCATGATTGAAGCGGTAAA
AGCCGGAGCTCTCTCTCTTGAAAAACTCGAAGCCATGACCTGTGTCTGTTCAGTCGGGCTTGACATGATAGCAGTCCCGG
GAGATACTCCTGCAACTACCCTTTCTGCAATCATTGCTGATGAAATGGCTATAGGGGTAATAAACAAAAAGACAACAGCA
GTCAGGGTGATTCCAGCACCCGGAAAAGAAGTTGGGGATTCTGTGGAATTTGGCGGGTTGCTCGGCAGTGCCCCTGTTAT
GCCTGTAAGCAATTTCAGTTCAGAAACTTTCATAAAGCGGGGAGGAAGAATTCCGGCTCCTATCCAGTCATTGACAAACT
GA

Upstream 100 bases:

>100_bases
CCGAAGGCAAAAGCCTTGGAGTTGAGGTCAAAGTTCAGCATGAAGACGCTTTCCGTTTCATGCACAGGATCTGATTTTTC
AGGAAGGGAGGATTTTTTTC

Downstream 100 bases:

>100_bases
AATATTGTCCTTAAAATTGAATCCACTCTGGCAGGTAGCTCTTCAGTATGTTCTCATGAACCAGCATATTCCGACTTCAT
AAGAATATGCTGGTTCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MLINPKEILETIQMVRMEHLDIRTVTMGISLRDCSHPDIEIFNENIYAKITSRAKDLVRTTNEIQSLYGIPIINRRISVT
PIAIAAESCRSRDFVSIAKTMDEAAKEAGVDFIGGFSALVHKGETGGDLKLINSIPEALASTEKVCSSVNVATTKAGINM
DAVGLMGKVIKKTAELTSDRDGIGCAKLVVFANAPDDNPFMAGAFHGIGEPECVINVGVSGPGVVNAAVCELENPDLTEI
SETIKRTAFKITRMGEMVGREVSRRLGVEFGILDLSLAPTPAIGDSVAAILEAMGLERCGAHGTTAALALLNDAVKKGGA
MASSSVGGLSGAFIPVSEDAGMIEAVKAGALSLEKLEAMTCVCSVGLDMIAVPGDTPATTLSAIIADEMAIGVINKKTTA
VRVIPAPGKEVGDSVEFGGLLGSAPVMPVSNFSSETFIKRGGRIPAPIQSLTN

Sequences:

>Translated_453_residues
MLINPKEILETIQMVRMEHLDIRTVTMGISLRDCSHPDIEIFNENIYAKITSRAKDLVRTTNEIQSLYGIPIINRRISVT
PIAIAAESCRSRDFVSIAKTMDEAAKEAGVDFIGGFSALVHKGETGGDLKLINSIPEALASTEKVCSSVNVATTKAGINM
DAVGLMGKVIKKTAELTSDRDGIGCAKLVVFANAPDDNPFMAGAFHGIGEPECVINVGVSGPGVVNAAVCELENPDLTEI
SETIKRTAFKITRMGEMVGREVSRRLGVEFGILDLSLAPTPAIGDSVAAILEAMGLERCGAHGTTAALALLNDAVKKGGA
MASSSVGGLSGAFIPVSEDAGMIEAVKAGALSLEKLEAMTCVCSVGLDMIAVPGDTPATTLSAIIADEMAIGVINKKTTA
VRVIPAPGKEVGDSVEFGGLLGSAPVMPVSNFSSETFIKRGGRIPAPIQSLTN
>Mature_453_residues
MLINPKEILETIQMVRMEHLDIRTVTMGISLRDCSHPDIEIFNENIYAKITSRAKDLVRTTNEIQSLYGIPIINRRISVT
PIAIAAESCRSRDFVSIAKTMDEAAKEAGVDFIGGFSALVHKGETGGDLKLINSIPEALASTEKVCSSVNVATTKAGINM
DAVGLMGKVIKKTAELTSDRDGIGCAKLVVFANAPDDNPFMAGAFHGIGEPECVINVGVSGPGVVNAAVCELENPDLTEI
SETIKRTAFKITRMGEMVGREVSRRLGVEFGILDLSLAPTPAIGDSVAAILEAMGLERCGAHGTTAALALLNDAVKKGGA
MASSSVGGLSGAFIPVSEDAGMIEAVKAGALSLEKLEAMTCVCSVGLDMIAVPGDTPATTLSAIIADEMAIGVINKKTTA
VRVIPAPGKEVGDSVEFGGLLGSAPVMPVSNFSSETFIKRGGRIPAPIQSLTN

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007841 [H]

Pfam domain/function: PF05167 DUF711 [H]

EC number: NA

Molecular weight: Translated: 47240; Mature: 47240

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINPKEILETIQMVRMEHLDIRTVTMGISLRDCSHPDIEIFNENIYAKITSRAKDLVRT
CCCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEECCCCEEHHHHHHHHHHHH
TNEIQSLYGIPIINRRISVTPIAIAAESCRSRDFVSIAKTMDEAAKEAGVDFIGGFSALV
HHHHHHHHCCCEECCEEEECCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHH
HKGETGGDLKLINSIPEALASTEKVCSSVNVATTKAGINMDAVGLMGKVIKKTAELTSDR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC
DGIGCAKLVVFANAPDDNPFMAGAFHGIGEPECVINVGVSGPGVVNAAVCELENPDLTEI
CCCCEEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEHEEEECCCCCHHHH
SETIKRTAFKITRMGEMVGREVSRRLGVEFGILDLSLAPTPAIGDSVAAILEAMGLERCG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHCC
AHGTTAALALLNDAVKKGGAMASSSVGGLSGAFIPVSEDAGMIEAVKAGALSLEKLEAMT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHH
CVCSVGLDMIAVPGDTPATTLSAIIADEMAIGVINKKTTAVRVIPAPGKEVGDSVEFGGL
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCHHHCCCCHHCCC
LGSAPVMPVSNFSSETFIKRGGRIPAPIQSLTN
CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MLINPKEILETIQMVRMEHLDIRTVTMGISLRDCSHPDIEIFNENIYAKITSRAKDLVRT
CCCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEECCCCEEHHHHHHHHHHHH
TNEIQSLYGIPIINRRISVTPIAIAAESCRSRDFVSIAKTMDEAAKEAGVDFIGGFSALV
HHHHHHHHCCCEECCEEEECCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHH
HKGETGGDLKLINSIPEALASTEKVCSSVNVATTKAGINMDAVGLMGKVIKKTAELTSDR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC
DGIGCAKLVVFANAPDDNPFMAGAFHGIGEPECVINVGVSGPGVVNAAVCELENPDLTEI
CCCCEEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEHEEEECCCCCHHHH
SETIKRTAFKITRMGEMVGREVSRRLGVEFGILDLSLAPTPAIGDSVAAILEAMGLERCG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHCC
AHGTTAALALLNDAVKKGGAMASSSVGGLSGAFIPVSEDAGMIEAVKAGALSLEKLEAMT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHH
CVCSVGLDMIAVPGDTPATTLSAIIADEMAIGVINKKTTAVRVIPAPGKEVGDSVEFGGL
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCHHHCCCCHHCCC
LGSAPVMPVSNFSSETFIKRGGRIPAPIQSLTN
CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]