Click here to switch to the map view.

The map label for this gene is yncE [C]

Identifier: 21226145

GI number: 21226145

Start: 55009

End: 57651

Strand: Reverse

Name: yncE [C]

Synonym: MM_0043

Alternate gene names: 21226145

Gene position: 57651-55009 (Counterclockwise)

Preceding gene: 21226149

Following gene: 21226141

Centisome position: 1.41

GC content: 40.37

Gene sequence:

>2643_bases
ATGAGGAAAATACTAATTTTTTTAATAGTTCTAATTTTTATTTTTATAATATCTATTTCAGCTACTTCATCAGCAAAGGA
AATTACAGTGGATGATGGTTCTGGAGCTGATTTCAGATCAATTCAGGAAGCTGTGAATAATTCTGTACCAGGGGACACAA
TAACCGTGATGCCTGGAATTTATACTGAAAACGTTCTTGTCAATATAACCGGGCTAACTATCAAGTCAGAATCAAACAAT
GGTGATGCGCAGGTAAAACCGCTAAATGAAAGTGTAAGTACCTTTCTGATAACAGCTAATAGCACAACGATCAGTGGTTT
AAATATAACAGGAGCCAGTAAGATGAATCATAAAAATGCAATCTTTGCTTATAGCAAGAGGAATAATGTAACAGGTAATA
CTATTGAAAACGGTTCTATTTTTCTGGGATCCTACATGCCAAGCAATTTAAAAATCATCTTTCATGGCGATATGAATAAT
GTGACAGGTAATATCATTGAAAACGGTTCTATTTTTCTGGGATCCGAGATTTCAGGCAATTTAATAGCCGAAAATAAAAT
TTCTAACGGCGAAGAGGGTGTATATATTTCCTGCTGTGGAGGAAATAATACAGTATCAGGTAATACGATCTCAAATTGTT
CCACTGGCATCTCCGAAGGGGATCAGGGAGCAGATATTCGTAATAACAGGATTACTGACTGCGATTGTGGGATTTGGCTT
TCGATGTCAAGTTCAGGAATTGAAAATAATACAATATTAAACTGTGATGTAGGGATTATTTTAGGTGACGCTTGTACTGT
TGACATAATCAACAATACAATAACATCCTGTACAGAATGTGGGATTTTTAATAGGGGAAATTATGACCGTAGAAGAATCT
ACAATAATTATTTTAACAATAGTCTAAACGTAAAGTTTGGACCTGGCGAAGGGGGAAATATCTGGAACAGTTCACTTGCT
TCAGGCAGTAACATTGCCGATGGCCCTTACATTGGAGGAAACTTCTGGGCAAAGCCAGATGGGACCGGATTCTCCCAGAT
CTGCGTGGATCTGGATAGGAATGGGATCGGAGACCTGCCTTATAATATCTATGAGAATGAATTTGACTATTTGCCTCTTG
TATCTATGTCCAGTCTGCAAAATTCAGTTACTCCAACTGCTAACTTTACAGCCAGCGTCACTAATGGTCCTGCACCCCTT
GTTGTCAAGTTTTCAGACCTTTCGAAAAACGCAGTTGCGTGGAACTGGGACTTTGATAATGATGGTATATCAGATTCCAC
AGAACAAAATCCTGTACATGTGTACAGAGCTCAAGGAAATTATACAGTTAATTTGACAGCTAGCAATGGATTCAATACTA
ATTCCAAACTTGCAAACATAAGCGTTGAAAAAAGGGTTTCATCCACGTGGCCGTTTATATACATTATAGGTGGAACTGTC
TCTGTAATTGACACAGCCACAGGATTAGTTATAACCAAAGTAAAAGTAGGACGTTCAATGCCTGAAGGAGTTGCAGTCAC
GCCAGATGGAAAAAAGGCATATGTACCTGACCGTTGGGGTGTTAATGTATCCGTAGTTGATACTGCAACAAATACTGTTA
TAGACACTGTGAAAGTAGGATCTGATCCCTATGGAGTTGCAATCAGTCCTGATGGAAAAAAGGTATATGTGGCTAACAGT
GGCAGCAATAATATTTCTATAATTAACACCGACGCAAACACTGTTACAGCTACTGTGCCTGTTGGAATTAGCCCTACTGG
AGTTGCTGTCGTACCGGATGGATCAAAGGTGTATGTGGCGAATTCAGGCAGTTATCCAAGCTACGAGGGTACTGTTTCTG
TAATTGATACAGCTACTAGCATGGTCACAGCTACGGTACATGTAGGAAATCATCCTTCTAGAGTTGCAGTAACCCCGGAT
GGAAAAAAGGTATATGTGGCAAACTGGGGTCATTATGTCTCTGTAGTTGATACAGCTACAAATACTGTTACAGCTACGGT
GGATGTAGATAATTCTCCTGATGAAATTGTTGTCAATCCTACAGGAACAAAGGTATATGTGGCAGGAATGAAGAAGGGAT
ATGCTGCTGGCACAGACGATGGTTTCGTCTCTGCAATTGGTACCTCAAACAATACTATTATAGCTACAATGGATATTGTA
GGAGGCAGTCCTATAGGACTTGCAGTAACCCCAGATGGAAAAACGGTGTATGTGGCAAACAGCAACATTTCTGGTAACAG
TACTCTCTCTGTAATTGACACCTCAAACGATACTGTCTCAGCAACAGTGAATATCGAGACTCCTGGTAGAATTGCAATCA
TCCCGGATCCGGAATCAGTATTTCCGGTAGCTAATTTCAGCAGCAATGTCAGTGAAGGTTTTGCACCTCTCTCAGTTCAG
TTTACCGACAGCTCCGAAAACACAACGGGGTGGAACTGGAACTTTGGTGATGGAGCTGCTTCAAAAGAACAGAATCCAGC
TCACACTTATTTATCACCAGGAAACTATACAGCTTGTCTGATAGTAAACAACCCGGATGGTACAGATTCGAAGTTTACTA
CAATAACTGTGCTGGAAAGTAGTTCTGGCGATGATAGTCAGTCCAGTGGAGGAAGCAGCAAGGGCGGCAGCAGCGGTGGT
TGA

Upstream 100 bases:

>100_bases
ATCAAAAATAACTATGGAAATTAAAATATATTATATTTAATTAATAAGATTTATATTAATATTAATAAGGGATTATCTTA
TAATAGAATGGGGGAAATAA

Downstream 100 bases:

>100_bases
GGCGGATCCCCTGTACCTGCAAAAAACGTTGAGGTCAAGGAACTTTTTCAGGTCTTCATTACAAACGGAAACCCTGTAAA
GTTTAATTTCCCAAAGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: YVTN Beta-Propeller Repeat-Containing Protein; 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; Surface Layer Protein B; YVTN Family Beta-Propeller Repeat Protein; Cell Surface Glycoprotein; Triple Helix Repeat-Containing Collagen; PKD Domain-Containing Protein; NHL Repeat Containing Protein; Alpha-1 2-Mannosidase; Glycine-Rich Cell Wall Protein; Vegetative Incompatibility; Beta-Propeller Fold Protein; Signal Peptide; SGL Domain-Containing Protein; LOW QUALITY PROTEIN Surface Antigen Protein; Surface Antigen; IPT/TIG Domain Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Serine/Threonine Protein Kinase; Secreted Protein; Alkaline Serine Protease; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 880; Mature: 880

Protein sequence:

>880_residues
MRKILIFLIVLIFIFIISISATSSAKEITVDDGSGADFRSIQEAVNNSVPGDTITVMPGIYTENVLVNITGLTIKSESNN
GDAQVKPLNESVSTFLITANSTTISGLNITGASKMNHKNAIFAYSKRNNVTGNTIENGSIFLGSYMPSNLKIIFHGDMNN
VTGNIIENGSIFLGSEISGNLIAENKISNGEEGVYISCCGGNNTVSGNTISNCSTGISEGDQGADIRNNRITDCDCGIWL
SMSSSGIENNTILNCDVGIILGDACTVDIINNTITSCTECGIFNRGNYDRRRIYNNYFNNSLNVKFGPGEGGNIWNSSLA
SGSNIADGPYIGGNFWAKPDGTGFSQICVDLDRNGIGDLPYNIYENEFDYLPLVSMSSLQNSVTPTANFTASVTNGPAPL
VVKFSDLSKNAVAWNWDFDNDGISDSTEQNPVHVYRAQGNYTVNLTASNGFNTNSKLANISVEKRVSSTWPFIYIIGGTV
SVIDTATGLVITKVKVGRSMPEGVAVTPDGKKAYVPDRWGVNVSVVDTATNTVIDTVKVGSDPYGVAISPDGKKVYVANS
GSNNISIINTDANTVTATVPVGISPTGVAVVPDGSKVYVANSGSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPD
GKKVYVANWGHYVSVVDTATNTVTATVDVDNSPDEIVVNPTGTKVYVAGMKKGYAAGTDDGFVSAIGTSNNTIIATMDIV
GGSPIGLAVTPDGKTVYVANSNISGNSTLSVIDTSNDTVSATVNIETPGRIAIIPDPESVFPVANFSSNVSEGFAPLSVQ
FTDSSENTTGWNWNFGDGAASKEQNPAHTYLSPGNYTACLIVNNPDGTDSKFTTITVLESSSGDDSQSSGGSSKGGSSGG

Sequences:

>Translated_880_residues
MRKILIFLIVLIFIFIISISATSSAKEITVDDGSGADFRSIQEAVNNSVPGDTITVMPGIYTENVLVNITGLTIKSESNN
GDAQVKPLNESVSTFLITANSTTISGLNITGASKMNHKNAIFAYSKRNNVTGNTIENGSIFLGSYMPSNLKIIFHGDMNN
VTGNIIENGSIFLGSEISGNLIAENKISNGEEGVYISCCGGNNTVSGNTISNCSTGISEGDQGADIRNNRITDCDCGIWL
SMSSSGIENNTILNCDVGIILGDACTVDIINNTITSCTECGIFNRGNYDRRRIYNNYFNNSLNVKFGPGEGGNIWNSSLA
SGSNIADGPYIGGNFWAKPDGTGFSQICVDLDRNGIGDLPYNIYENEFDYLPLVSMSSLQNSVTPTANFTASVTNGPAPL
VVKFSDLSKNAVAWNWDFDNDGISDSTEQNPVHVYRAQGNYTVNLTASNGFNTNSKLANISVEKRVSSTWPFIYIIGGTV
SVIDTATGLVITKVKVGRSMPEGVAVTPDGKKAYVPDRWGVNVSVVDTATNTVIDTVKVGSDPYGVAISPDGKKVYVANS
GSNNISIINTDANTVTATVPVGISPTGVAVVPDGSKVYVANSGSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPD
GKKVYVANWGHYVSVVDTATNTVTATVDVDNSPDEIVVNPTGTKVYVAGMKKGYAAGTDDGFVSAIGTSNNTIIATMDIV
GGSPIGLAVTPDGKTVYVANSNISGNSTLSVIDTSNDTVSATVNIETPGRIAIIPDPESVFPVANFSSNVSEGFAPLSVQ
FTDSSENTTGWNWNFGDGAASKEQNPAHTYLSPGNYTACLIVNNPDGTDSKFTTITVLESSSGDDSQSSGGSSKGGSSGG
>Mature_880_residues
MRKILIFLIVLIFIFIISISATSSAKEITVDDGSGADFRSIQEAVNNSVPGDTITVMPGIYTENVLVNITGLTIKSESNN
GDAQVKPLNESVSTFLITANSTTISGLNITGASKMNHKNAIFAYSKRNNVTGNTIENGSIFLGSYMPSNLKIIFHGDMNN
VTGNIIENGSIFLGSEISGNLIAENKISNGEEGVYISCCGGNNTVSGNTISNCSTGISEGDQGADIRNNRITDCDCGIWL
SMSSSGIENNTILNCDVGIILGDACTVDIINNTITSCTECGIFNRGNYDRRRIYNNYFNNSLNVKFGPGEGGNIWNSSLA
SGSNIADGPYIGGNFWAKPDGTGFSQICVDLDRNGIGDLPYNIYENEFDYLPLVSMSSLQNSVTPTANFTASVTNGPAPL
VVKFSDLSKNAVAWNWDFDNDGISDSTEQNPVHVYRAQGNYTVNLTASNGFNTNSKLANISVEKRVSSTWPFIYIIGGTV
SVIDTATGLVITKVKVGRSMPEGVAVTPDGKKAYVPDRWGVNVSVVDTATNTVIDTVKVGSDPYGVAISPDGKKVYVANS
GSNNISIINTDANTVTATVPVGISPTGVAVVPDGSKVYVANSGSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPD
GKKVYVANWGHYVSVVDTATNTVTATVDVDNSPDEIVVNPTGTKVYVAGMKKGYAAGTDDGFVSAIGTSNNTIIATMDIV
GGSPIGLAVTPDGKTVYVANSNISGNSTLSVIDTSNDTVSATVNIETPGRIAIIPDPESVFPVANFSSNVSEGFAPLSVQ
FTDSSENTTGWNWNFGDGAASKEQNPAHTYLSPGNYTACLIVNNPDGTDSKFTTITVLESSSGDDSQSSGGSSKGGSSGG

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92113; Mature: 92113

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS50093 PKD ; PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILIFLIVLIFIFIISISATSSAKEITVDDGSGADFRSIQEAVNNSVPGDTITVMPGI
CHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCC
YTENVLVNITGLTIKSESNNGDAQVKPLNESVSTFLITANSTTISGLNITGASKMNHKNA
EECCEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCE
IFAYSKRNNVTGNTIENGSIFLGSYMPSNLKIIFHGDMNNVTGNIIENGSIFLGSEISGN
EEEEECCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCEEEECCCCCC
LIAENKISNGEEGVYISCCGGNNTVSGNTISNCSTGISEGDQGADIRNNRITDCDCGIWL
EEEECCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
SMSSSGIENNTILNCDVGIILGDACTVDIINNTITSCTECGIFNRGNYDRRRIYNNYFNN
EECCCCCCCCEEEEEEEEEEECCEEEEEEHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCC
SLNVKFGPGEGGNIWNSSLASGSNIADGPYIGGNFWAKPDGTGFSQICVDLDRNGIGDLP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCCCHHHEEEEECCCCCCCCC
YNIYENEFDYLPLVSMSSLQNSVTPTANFTASVTNGPAPLVVKFSDLSKNAVAWNWDFDN
CEEECCCCCEECEEEHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCC
DGISDSTEQNPVHVYRAQGNYTVNLTASNGFNTNSKLANISVEKRVSSTWPFIYIIGGTV
CCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCEEEEECCEE
SVIDTATGLVITKVKVGRSMPEGVAVTPDGKKAYVPDRWGVNVSVVDTATNTVIDTVKVG
EEEECCCCEEEEEEECCCCCCCCEEECCCCCEEECCCCCCCEEEEEECCCCEEEEEEEEC
SDPYGVAISPDGKKVYVANSGSNNISIINTDANTVTATVPVGISPTGVAVVPDGSKVYVA
CCCCEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCEEEEE
NSGSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPDGKKVYVANWGHYVSVVDTAT
ECCCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEEEEECCCEEEEEECCC
NTVTATVDVDNSPDEIVVNPTGTKVYVAGMKKGYAAGTDDGFVSAIGTSNNTIIATMDIV
CEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEEC
GGSPIGLAVTPDGKTVYVANSNISGNSTLSVIDTSNDTVSATVNIETPGRIAIIPDPESV
CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCE
FPVANFSSNVSEGFAPLSVQFTDSSENTTGWNWNFGDGAASKEQNPAHTYLSPGNYTACL
EEECCCCCCHHCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCEEEEE
IVNNPDGTDSKFTTITVLESSSGDDSQSSGGSSKGGSSGG
EEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKILIFLIVLIFIFIISISATSSAKEITVDDGSGADFRSIQEAVNNSVPGDTITVMPGI
CHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCC
YTENVLVNITGLTIKSESNNGDAQVKPLNESVSTFLITANSTTISGLNITGASKMNHKNA
EECCEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCE
IFAYSKRNNVTGNTIENGSIFLGSYMPSNLKIIFHGDMNNVTGNIIENGSIFLGSEISGN
EEEEECCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCEEEECCCCCC
LIAENKISNGEEGVYISCCGGNNTVSGNTISNCSTGISEGDQGADIRNNRITDCDCGIWL
EEEECCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
SMSSSGIENNTILNCDVGIILGDACTVDIINNTITSCTECGIFNRGNYDRRRIYNNYFNN
EECCCCCCCCEEEEEEEEEEECCEEEEEEHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCC
SLNVKFGPGEGGNIWNSSLASGSNIADGPYIGGNFWAKPDGTGFSQICVDLDRNGIGDLP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCCCHHHEEEEECCCCCCCCC
YNIYENEFDYLPLVSMSSLQNSVTPTANFTASVTNGPAPLVVKFSDLSKNAVAWNWDFDN
CEEECCCCCEECEEEHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCC
DGISDSTEQNPVHVYRAQGNYTVNLTASNGFNTNSKLANISVEKRVSSTWPFIYIIGGTV
CCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCEEEEECCEE
SVIDTATGLVITKVKVGRSMPEGVAVTPDGKKAYVPDRWGVNVSVVDTATNTVIDTVKVG
EEEECCCCEEEEEEECCCCCCCCEEECCCCCEEECCCCCCCEEEEEECCCCEEEEEEEEC
SDPYGVAISPDGKKVYVANSGSNNISIINTDANTVTATVPVGISPTGVAVVPDGSKVYVA
CCCCEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCEEEEE
NSGSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPDGKKVYVANWGHYVSVVDTAT
ECCCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEECCCCCEEEEEECCCEEEEEECCC
NTVTATVDVDNSPDEIVVNPTGTKVYVAGMKKGYAAGTDDGFVSAIGTSNNTIIATMDIV
CEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEEC
GGSPIGLAVTPDGKTVYVANSNISGNSTLSVIDTSNDTVSATVNIETPGRIAIIPDPESV
CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCE
FPVANFSSNVSEGFAPLSVQFTDSSENTTGWNWNFGDGAASKEQNPAHTYLSPGNYTACL
EEECCCCCCHHCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCEEEEE
IVNNPDGTDSKFTTITVLESSSGDDSQSSGGSSKGGSSGG
EEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA