Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226122

Identifier: 21226122

GI number: 21226122

Start: 24297

End: 25307

Strand: Reverse

Name: 21226122

Synonym: MM_0020

Alternate gene names: NA

Gene position: 25307-24297 (Counterclockwise)

Preceding gene: 21226128

Following gene: 21226121

Centisome position: 0.62

GC content: 35.91

Gene sequence:

>1011_bases
TTGAGAAAAGAAGATAAGTCACCTGCTGATAAGCAGAAAATCTGGAAGAAATTTATCAGTCGAATGGCTGATTCTAGTGG
TGATGTCTGCATATTACCATCTTTTTTATTCAGAAGCTTAATTTCACGTGTCCCAAATAAACAACAGAGTTGGGAAGACC
TTCTGATAGTTGTCAGCAGAGCAAAAGAATTTCCACTAGAAGACCCCTCCTTTGTATTTGATACTAACTTTCAATACGTC
CCTGATAAGCAAAATGCCTGGAATAGTTTGTATAAACTAACAAGGGATAAGAAAGCAAGCGTAAGAATAATTGCGGCGTA
TTCATTAGGTAACTTATTTTCACTGGCTCCTGACAAAGAAAAAGCGTGGAAGAATTTACATAAACTGGCAAACAGCGAAG
ATGTTTACGCCCGTATAGGTGGAGCTAAATCAATAGGCTCAGCGTTCAGAGATATATCGAATAAGCAGGAAGCATGGAAC
GATTTGCATAAATTGACTAATGATCAAGAAGCTGTTGTAAGAGCAAACGCAATAAATTCACTTGATCCAGTATTCCCATA
TATTTCAGATAAACAGGAAGCGTGGAGGAATATACATAAGTTTTTAAATGAAAGTGATTTTCGCGTAAAATATTGTGCAG
TAAATTTCCTCAACTCAGATGCAGTTGTTCCAACATTTATCTCTGTTCCTGATAATCAGCAAATTTGGGAAGATCTGGTA
AAAATAGCGGTAAAAGAAGAAGGATTCATAAAATTTAACGCATCAAGAGCACTTACCGGATTATATCCATATTTGCCAGA
CAAAAAGCAGGGATGGAAGGATTTACACGAGTTAACTAATAGCAAAAATTACTTGGTAAGAAGGGAAGTAGTATATTCTC
TCAAAGTTGCTTTTGAGCATCTTGAAGATAAAACTCAAATTTGGGAAGATTTACATAGATTAGCCAATGATGAAGATAAA
TTTGTAAGAAGCACTGCGGCAGATTTCTTGAAAACTATTGCAGGGTATTAA

Upstream 100 bases:

>100_bases
ATTTAGGGAACTTTGGTGGCAAATATTGAAAAGCTTAAAAAGGACTCGTAAAAAAAAGTACGATAAAAAAGTGATGGAAT
TAAAGTGGCTTTTAAGCCAA

Downstream 100 bases:

>100_bases
ATATGAAACAGAGCAAGAATAATCGACCCTGAAAAATCTCCTTATAATGCTGCAAAAATCACGGGTTTTTCAATTTCTCT
TTTTTTACTTTATCTTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRKEDKSPADKQKIWKKFISRMADSSGDVCILPSFLFRSLISRVPNKQQSWEDLLIVVSRAKEFPLEDPSFVFDTNFQYV
PDKQNAWNSLYKLTRDKKASVRIIAAYSLGNLFSLAPDKEKAWKNLHKLANSEDVYARIGGAKSIGSAFRDISNKQEAWN
DLHKLTNDQEAVVRANAINSLDPVFPYISDKQEAWRNIHKFLNESDFRVKYCAVNFLNSDAVVPTFISVPDNQQIWEDLV
KIAVKEEGFIKFNASRALTGLYPYLPDKKQGWKDLHELTNSKNYLVRREVVYSLKVAFEHLEDKTQIWEDLHRLANDEDK
FVRSTAADFLKTIAGY

Sequences:

>Translated_336_residues
MRKEDKSPADKQKIWKKFISRMADSSGDVCILPSFLFRSLISRVPNKQQSWEDLLIVVSRAKEFPLEDPSFVFDTNFQYV
PDKQNAWNSLYKLTRDKKASVRIIAAYSLGNLFSLAPDKEKAWKNLHKLANSEDVYARIGGAKSIGSAFRDISNKQEAWN
DLHKLTNDQEAVVRANAINSLDPVFPYISDKQEAWRNIHKFLNESDFRVKYCAVNFLNSDAVVPTFISVPDNQQIWEDLV
KIAVKEEGFIKFNASRALTGLYPYLPDKKQGWKDLHELTNSKNYLVRREVVYSLKVAFEHLEDKTQIWEDLHRLANDEDK
FVRSTAADFLKTIAGY
>Mature_336_residues
MRKEDKSPADKQKIWKKFISRMADSSGDVCILPSFLFRSLISRVPNKQQSWEDLLIVVSRAKEFPLEDPSFVFDTNFQYV
PDKQNAWNSLYKLTRDKKASVRIIAAYSLGNLFSLAPDKEKAWKNLHKLANSEDVYARIGGAKSIGSAFRDISNKQEAWN
DLHKLTNDQEAVVRANAINSLDPVFPYISDKQEAWRNIHKFLNESDFRVKYCAVNFLNSDAVVPTFISVPDNQQIWEDLV
KIAVKEEGFIKFNASRALTGLYPYLPDKKQGWKDLHELTNSKNYLVRREVVYSLKVAFEHLEDKTQIWEDLHRLANDEDK
FVRSTAADFLKTIAGY

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38808; Mature: 38808

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEDKSPADKQKIWKKFISRMADSSGDVCILPSFLFRSLISRVPNKQQSWEDLLIVVSR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AKEFPLEDPSFVFDTNFQYVPDKQNAWNSLYKLTRDKKASVRIIAAYSLGNLFSLAPDKE
HHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHCCCCHH
KAWKNLHKLANSEDVYARIGGAKSIGSAFRDISNKQEAWNDLHKLTNDQEAVVRANAINS
HHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCC
LDPVFPYISDKQEAWRNIHKFLNESDFRVKYCAVNFLNSDAVVPTFISVPDNQQIWEDLV
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHH
KIAVKEEGFIKFNASRALTGLYPYLPDKKQGWKDLHELTNSKNYLVRREVVYSLKVAFEH
HHHHCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LEDKTQIWEDLHRLANDEDKFVRSTAADFLKTIAGY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKEDKSPADKQKIWKKFISRMADSSGDVCILPSFLFRSLISRVPNKQQSWEDLLIVVSR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AKEFPLEDPSFVFDTNFQYVPDKQNAWNSLYKLTRDKKASVRIIAAYSLGNLFSLAPDKE
HHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHCCCCHH
KAWKNLHKLANSEDVYARIGGAKSIGSAFRDISNKQEAWNDLHKLTNDQEAVVRANAINS
HHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCC
LDPVFPYISDKQEAWRNIHKFLNESDFRVKYCAVNFLNSDAVVPTFISVPDNQQIWEDLV
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHH
KIAVKEEGFIKFNASRALTGLYPYLPDKKQGWKDLHELTNSKNYLVRREVVYSLKVAFEH
HHHHCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LEDKTQIWEDLHRLANDEDKFVRSTAADFLKTIAGY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA