Click here to switch to the map view.

The map label for this gene is Spo0J4 [H]

Identifier: 20809119

GI number: 20809119

Start: 2679770

End: 2680633

Strand: Reverse

Name: Spo0J4 [H]

Synonym: TTE2790

Alternate gene names: 20809119

Gene position: 2680633-2679770 (Counterclockwise)

Preceding gene: 20809120

Following gene: 20809118

Centisome position: 99.67

GC content: 37.96

Gene sequence:

>864_bases
GTGGCGGGGAAAAAAGGTCTGGGAAGAGGCTTGCAGGCGCTTATTCCGGAATACAGAGAGGAAGAGGCTCAAGGGGTAGA
AACGGTTCAGATAGATAAAATATTTCCTAATCAATATCAACCGAGAAAGCATTTTAACGAAGAAAGTTTAAGGGAATTGG
CAGATTCTATAAAGGAACACGGTATTGTACAGCCATTGGTTGTAAGAAGGCAGGGAACGGGCTATCAGCTGGTGGCAGGA
GAAAGGAGATGGCGAGCGGCAAAAATTGCAGGGTTAAAGGAAGTTCCGGTTATAATTAGAGATTTAGATGACTTACAGGT
TATGGAAATTGCTCTCATTGAAAATCTCCAAAGAGAAGATTTAAATCCCATTGAAGAAGCAAAAGCATATAAGACTTTGA
TGGAACAGTTTAATTTGACTCAAGAGGAAATTGCCAAAAAAATAGGAAAGAGCAGGTCAGTCATTGCTAACAGCATAAGG
CTTTTGAATTTGGACGACAGGGTGCAGGAAATGCTGATAGAAGGGAAAATAACAGTGGGACATGCAAAGGTGATTTTATC
TATAACGAGCAAGACTCTTCAATATGAAGCAGCAAAAAAGATAGTGGAAGATGGACTCAATGTAAGGGAAACAGAAAAAC
TGGTGAAAACTCTCCTCAGTAGAAGTGAAAAGACAAAAGAAAAAAGAAAAGATAAAAGAATAGATGTACATATAAGGGAA
ATAGAAGATAATCTCTGCAGTCTATTAGGAACAAAAGTTCAGATACTTCAAAAAGGGAAAGAGAAAGGCATTATACAGAT
TGAGTATTATGGTGAAGAAGACCTGACTAGAATTTTGGATATTATTTACGGTTTTGAAAAGTGA

Upstream 100 bases:

>100_bases
CTCTATGACCCTACTTCCAAAGGGGCTGAAGCATATGAAGATTTGGCTGAAGAAGTAATAGAAAGGGCTGGAATATAAAA
TTTTAAAAGGTGGTGTTAGA

Downstream 100 bases:

>100_bases
TAATAATATGCTTTACAAATTGATACAAAAGTTGGAGAGGGACTTTTATAAGGTCCCTTAATTTATTTTTGTTGTCAAGG
ATTATGAATAGGTATAAAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAGKKGLGRGLQALIPEYREEEAQGVETVQIDKIFPNQYQPRKHFNEESLRELADSIKEHGIVQPLVVRRQGTGYQLVAG
ERRWRAAKIAGLKEVPVIIRDLDDLQVMEIALIENLQREDLNPIEEAKAYKTLMEQFNLTQEEIAKKIGKSRSVIANSIR
LLNLDDRVQEMLIEGKITVGHAKVILSITSKTLQYEAAKKIVEDGLNVRETEKLVKTLLSRSEKTKEKRKDKRIDVHIRE
IEDNLCSLLGTKVQILQKGKEKGIIQIEYYGEEDLTRILDIIYGFEK

Sequences:

>Translated_287_residues
MAGKKGLGRGLQALIPEYREEEAQGVETVQIDKIFPNQYQPRKHFNEESLRELADSIKEHGIVQPLVVRRQGTGYQLVAG
ERRWRAAKIAGLKEVPVIIRDLDDLQVMEIALIENLQREDLNPIEEAKAYKTLMEQFNLTQEEIAKKIGKSRSVIANSIR
LLNLDDRVQEMLIEGKITVGHAKVILSITSKTLQYEAAKKIVEDGLNVRETEKLVKTLLSRSEKTKEKRKDKRIDVHIRE
IEDNLCSLLGTKVQILQKGKEKGIIQIEYYGEEDLTRILDIIYGFEK
>Mature_286_residues
AGKKGLGRGLQALIPEYREEEAQGVETVQIDKIFPNQYQPRKHFNEESLRELADSIKEHGIVQPLVVRRQGTGYQLVAGE
RRWRAAKIAGLKEVPVIIRDLDDLQVMEIALIENLQREDLNPIEEAKAYKTLMEQFNLTQEEIAKKIGKSRSVIANSIRL
LNLDDRVQEMLIEGKITVGHAKVILSITSKTLQYEAAKKIVEDGLNVRETEKLVKTLLSRSEKTKEKRKDKRIDVHIREI
EDNLCSLLGTKVQILQKGKEKGIIQIEYYGEEDLTRILDIIYGFEK

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32898; Mature: 32766

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKKGLGRGLQALIPEYREEEAQGVETVQIDKIFPNQYQPRKHFNEESLRELADSIKEH
CCCCCCHHCCHHHHCCHHHHHHHCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHC
GIVQPLVVRRQGTGYQLVAGERRWRAAKIAGLKEVPVIIRDLDDLQVMEIALIENLQRED
CCCCHHHEEECCCCEEEEECCCHHHHHHHCCCHHCCHHHHCCCHHHHHHHHHHHHHHHCC
LNPIEEAKAYKTLMEQFNLTQEEIAKKIGKSRSVIANSIRLLNLDDRVQEMLIEGKITVG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHCCEEEC
HAKVILSITSKTLQYEAAKKIVEDGLNVRETEKLVKTLLSRSEKTKEKRKDKRIDVHIRE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IEDNLCSLLGTKVQILQKGKEKGIIQIEYYGEEDLTRILDIIYGFEK
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGKKGLGRGLQALIPEYREEEAQGVETVQIDKIFPNQYQPRKHFNEESLRELADSIKEH
CCCCCHHCCHHHHCCHHHHHHHCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHC
GIVQPLVVRRQGTGYQLVAGERRWRAAKIAGLKEVPVIIRDLDDLQVMEIALIENLQRED
CCCCHHHEEECCCCEEEEECCCHHHHHHHCCCHHCCHHHHCCCHHHHHHHHHHHHHHHCC
LNPIEEAKAYKTLMEQFNLTQEEIAKKIGKSRSVIANSIRLLNLDDRVQEMLIEGKITVG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHCCEEEC
HAKVILSITSKTLQYEAAKKIVEDGLNVRETEKLVKTLLSRSEKTKEKRKDKRIDVHIRE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IEDNLCSLLGTKVQILQKGKEKGIIQIEYYGEEDLTRILDIIYGFEK
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]