Click here to switch to the map view.

The map label for this gene is OmpR8 [H]

Identifier: 20809033

GI number: 20809033

Start: 2584635

End: 2585330

Strand: Reverse

Name: OmpR8 [H]

Synonym: TTE2689

Alternate gene names: 20809033

Gene position: 2585330-2584635 (Counterclockwise)

Preceding gene: 20809034

Following gene: 20809032

Centisome position: 96.13

GC content: 39.51

Gene sequence:

>696_bases
ATGAGCAGCAAGATTTTGATTGTGGACGATGAAAAACCGCTTGTGGACATAATAAAGTATAATTTAGAAAAAGAAGGTTA
CATAACTTTTGAAGCCTATGACGGCGAAGAAGCCGTAAAGATGGCAAAAGAACAAAACCCTGACCTCATAATATTGGATG
TGATGCTTCCTAAAATGGACGGTTTTACCGTTTTAAAGACTTTGCGGCAGTCCATGACAGTTCCAATTTTGATGCTCACT
GCAAAAGAGGAGGAAGTAGATAAAGTATTGGGACTGGAATTGGGAGCTGATGATTATATCACAAAGCCTTTTTCAATGAG
GGAGCTCGTAGCTCGCGTTAAAGCGAATTTGAGGCGGGTAAGTTTCAATGGCAGCGAGCAGAATCACATTATACGGATAA
AGAATTTGAAGATCGACATCTTAAAGTACAAAGTGGAGAAGAACAACAAAGAGATAGAGTTAACCTCCCGAGAATTCGAG
CTTTTGAGATTTCTCGTTTTAAACAAAGGGCTGGTCTTTTCAAGAGAGGCTCTTTTAGAAAAAGTGTGGGGTTACGAATA
TTTTGGCGATATTAGAACGGTGGACGTCACCATAAGGCGATTGAGAGAAAAAATAGAAGATGACCCGAGCAACCCAAAAT
TCATACACACAAAAAGAGGGGTTGGTTACTATTTTAGCGATGAAAAGCCGATTTAA

Upstream 100 bases:

>100_bases
CACAGGAGATACTCTTAAAAGTTTTGTAGATTCTATAAAATAAAAGCAAGAAGAGTATTCTCTTCTTGCTTTAGCTCTAT
AAAATAAGGGGGCATAGAAA

Downstream 100 bases:

>100_bases
GAGCATCCAGTGGAAGATAATATTATTATACAGTTTGCTGATCTTGGTTGCAATGGAAATTATATGGATTTATCTCTATA
AATCCCTGGAAAACTATCAT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSSKILIVDDEKPLVDIIKYNLEKEGYITFEAYDGEEAVKMAKEQNPDLIILDVMLPKMDGFTVLKTLRQSMTVPILMLT
AKEEEVDKVLGLELGADDYITKPFSMRELVARVKANLRRVSFNGSEQNHIIRIKNLKIDILKYKVEKNNKEIELTSREFE
LLRFLVLNKGLVFSREALLEKVWGYEYFGDIRTVDVTIRRLREKIEDDPSNPKFIHTKRGVGYYFSDEKPI

Sequences:

>Translated_231_residues
MSSKILIVDDEKPLVDIIKYNLEKEGYITFEAYDGEEAVKMAKEQNPDLIILDVMLPKMDGFTVLKTLRQSMTVPILMLT
AKEEEVDKVLGLELGADDYITKPFSMRELVARVKANLRRVSFNGSEQNHIIRIKNLKIDILKYKVEKNNKEIELTSREFE
LLRFLVLNKGLVFSREALLEKVWGYEYFGDIRTVDVTIRRLREKIEDDPSNPKFIHTKRGVGYYFSDEKPI
>Mature_230_residues
SSKILIVDDEKPLVDIIKYNLEKEGYITFEAYDGEEAVKMAKEQNPDLIILDVMLPKMDGFTVLKTLRQSMTVPILMLTA
KEEEVDKVLGLELGADDYITKPFSMRELVARVKANLRRVSFNGSEQNHIIRIKNLKIDILKYKVEKNNKEIELTSREFEL
LRFLVLNKGLVFSREALLEKVWGYEYFGDIRTVDVTIRRLREKIEDDPSNPKFIHTKRGVGYYFSDEKPI

Specific function: Member of the two-component regulatory system walK/walR that regulates genes involved in autolysis, biofilm formation and cell wall metabolism [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=44.9781659388646, Blast_Score=187, Evalue=5e-49,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=40.0900900900901, Blast_Score=173, Evalue=7e-45,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=38.3259911894273, Blast_Score=160, Evalue=5e-41,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=35.8744394618834, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=39.8190045248869, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=42.0353982300885, Blast_Score=153, Evalue=8e-39,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=40.4444444444444, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=38.6363636363636, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=38.5281385281385, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=35.0649350649351, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=33.9285714285714, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=34.6666666666667, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=33.1932773109244, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=33.6283185840708, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=35.1851851851852, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790299, Length=139, Percent_Identity=26.6187050359712, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787487, Length=112, Percent_Identity=32.1428571428571, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26911; Mature: 26780

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKILIVDDEKPLVDIIKYNLEKEGYITFEAYDGEEAVKMAKEQNPDLIILDVMLPKMD
CCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCC
GFTVLKTLRQSMTVPILMLTAKEEEVDKVLGLELGADDYITKPFSMRELVARVKANLRRV
CHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHEEE
SFNGSEQNHIIRIKNLKIDILKYKVEKNNKEIELTSREFELLRFLVLNKGLVFSREALLE
EECCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCEEHHHHHHH
KVWGYEYFGDIRTVDVTIRRLREKIEDDPSNPKFIHTKRGVGYYFSDEKPI
HHCCHHHHCCEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCC
>Mature Secondary Structure 
SSKILIVDDEKPLVDIIKYNLEKEGYITFEAYDGEEAVKMAKEQNPDLIILDVMLPKMD
CCCEEEEECCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCC
GFTVLKTLRQSMTVPILMLTAKEEEVDKVLGLELGADDYITKPFSMRELVARVKANLRRV
CHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHEEE
SFNGSEQNHIIRIKNLKIDILKYKVEKNNKEIELTSREFELLRFLVLNKGLVFSREALLE
EECCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCEEHHHHHHH
KVWGYEYFGDIRTVDVTIRRLREKIEDDPSNPKFIHTKRGVGYYFSDEKPI
HHCCHHHHCCEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA