| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is BaeS12 [H]
Identifier: 20809032
GI number: 20809032
Start: 2582936
End: 2584669
Strand: Reverse
Name: BaeS12 [H]
Synonym: TTE2688
Alternate gene names: 20809032
Gene position: 2584669-2582936 (Counterclockwise)
Preceding gene: 20809033
Following gene: 20809031
Centisome position: 96.1
GC content: 37.77
Gene sequence:
>1734_bases TTGGTTACTATTTTAGCGATGAAAAGCCGATTTAAGAGCATCCAGTGGAAGATAATATTATTATACAGTTTGCTGATCTT GGTTGCAATGGAAATTATATGGATTTATCTCTATAAATCCCTGGAAAACTATCATTTAAACAATTTTGACAACTACCTTG AGGCGCAGGCGAAGGGTATTTCTTTTACTTTAAAGGACAACATGGACATAAAGAGCTTGAAAAGTGTAATAAACATGTAC ATGGGGCCTAATTCCAACATAAAGTACGTTTACATCTTGGACAGCCACGGGAATATCCTGGCAAGCTCCACAGGAGATAC AGGGAAGATGATGACACCCGCTATTGCAAAAGCTCTTTCGGGTGAGATGGGAAGTGAGCTCACAAAGGACTATTACTCTA ATAGCACTATTAAAAGCTTTGCTATGCCAATTTACAACAGTGAGGGAAAAGTAAGTGGAGTTGTGTATTTAATCGGCTCT TTAAAAGGCATATATGATACTTTATGGGATGTCAACTTGATTTTAGCAAGTGCTACTTTGTTTGCACTTATAATTACTAT GATATTAGGCTATATTCTTTCAAAAACCATAGCAGACCCTATAAAAGAAGTGACAAAGTATGCTCAAAGGATGGCAGAAG GGGATTTTGACATAAAAATAAATGTAAAGTCCGACGATGAAATAGGAAAATTGGGAGAGATGTTTAATTTCCTCTCTTCT CGTTTGAAGGAAACTTTAAATGACATACAAGGGGAAAAGAATAAAATAGAAGCTATCATCAAATTCATGAAAGACGGGGT TGTGGCGGCTGACGCAAATGGCAATATAATCCACTACAATGAAGCAGCTGAGAAGATGCTAAATAAAAAGTTGAGTTTAG GTATGCCTGTAGAAGAAGTGCTTCCTTTAAAAGAAGCAGAAAATCCCATCCCTATGACCTGCGACAACAGGGTGTTAATG ATTAATGCGGCTTCTGTTAAAATTAACAATCAAGTAGAAGGCTATGTGTATGTAATGCACGATATTACAGAGCAGCACAA ATTAGACCAGATGAGGAAAGAATTTGTAGCGAACGTCTCCCATGAGTTGAGGACTCCTCTTGCTACTATAAAAAGTTATG TAGAAACTCTTCTTTACAACGATGTGGACACGGAATATTCAAAGAAGTTTTTACGAATAATAGAAACAGAGACAGATAGA ATGACTCGCCTAGTAAAGGACCTTTTGCTTCTGTCAAAGATGGATTCGGAAGAGAACAGTTTGAAACTGGAACCTTGTGA TTTTAACGAAATAGTAAAAAATGTGGTAAACAGCCTATCTATTGAAGCTACCAAAAAAGGACATAATGTCATACTAAATT TGAGCGAGACGCTACAAAAGGTAAATGTGGATAAGGATAAGGTTGAGCAGATGGCAATGAACATAATAAACAATGCTATA AAATATACTCCTGAGGGGGGAGTCATAGAAATCTCTACGGCTTACGATGAAGAAGGAGTTACTTTCACTGTGAAAGATAA CGGAATAGGCATTCCAAAAGAGGACCTTCCGCGCATATTCGAGAGATTTTACAGAGTGGACAAAGCGAGGTCTAGAGAAT TGGGAGGAACGGGATTGGGGCTTTCAATTGTGAAACAGATAGTAGAGCTTCACAAGGGGAAAGTGAAGATAGAGAGCGAG CTGGGAAAAGGCACAGTAGTGACAGTACAGTTACCTTATTCTAAAAATTCGTAA
Upstream 100 bases:
>100_bases TTTGGCGATATTAGAACGGTGGACGTCACCATAAGGCGATTGAGAGAAAAAATAGAAGATGACCCGAGCAACCCAAAATT CATACACACAAAAAGAGGGG
Downstream 100 bases:
>100_bases TCGTAATTTAATATTGCTGTAACATTGCTGTAATAATAGTGGTATATAATCGTACATGTAGAGGAAAAGGAGGGATATCC TTGAAAAAAGTAATCGCATT
Product: sensory transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MVTILAMKSRFKSIQWKIILLYSLLILVAMEIIWIYLYKSLENYHLNNFDNYLEAQAKGISFTLKDNMDIKSLKSVINMY MGPNSNIKYVYILDSHGNILASSTGDTGKMMTPAIAKALSGEMGSELTKDYYSNSTIKSFAMPIYNSEGKVSGVVYLIGS LKGIYDTLWDVNLILASATLFALIITMILGYILSKTIADPIKEVTKYAQRMAEGDFDIKINVKSDDEIGKLGEMFNFLSS RLKETLNDIQGEKNKIEAIIKFMKDGVVAADANGNIIHYNEAAEKMLNKKLSLGMPVEEVLPLKEAENPIPMTCDNRVLM INAASVKINNQVEGYVYVMHDITEQHKLDQMRKEFVANVSHELRTPLATIKSYVETLLYNDVDTEYSKKFLRIIETETDR MTRLVKDLLLLSKMDSEENSLKLEPCDFNEIVKNVVNSLSIEATKKGHNVILNLSETLQKVNVDKDKVEQMAMNIINNAI KYTPEGGVIEISTAYDEEGVTFTVKDNGIGIPKEDLPRIFERFYRVDKARSRELGGTGLGLSIVKQIVELHKGKVKIESE LGKGTVVTVQLPYSKNS
Sequences:
>Translated_577_residues MVTILAMKSRFKSIQWKIILLYSLLILVAMEIIWIYLYKSLENYHLNNFDNYLEAQAKGISFTLKDNMDIKSLKSVINMY MGPNSNIKYVYILDSHGNILASSTGDTGKMMTPAIAKALSGEMGSELTKDYYSNSTIKSFAMPIYNSEGKVSGVVYLIGS LKGIYDTLWDVNLILASATLFALIITMILGYILSKTIADPIKEVTKYAQRMAEGDFDIKINVKSDDEIGKLGEMFNFLSS RLKETLNDIQGEKNKIEAIIKFMKDGVVAADANGNIIHYNEAAEKMLNKKLSLGMPVEEVLPLKEAENPIPMTCDNRVLM INAASVKINNQVEGYVYVMHDITEQHKLDQMRKEFVANVSHELRTPLATIKSYVETLLYNDVDTEYSKKFLRIIETETDR MTRLVKDLLLLSKMDSEENSLKLEPCDFNEIVKNVVNSLSIEATKKGHNVILNLSETLQKVNVDKDKVEQMAMNIINNAI KYTPEGGVIEISTAYDEEGVTFTVKDNGIGIPKEDLPRIFERFYRVDKARSRELGGTGLGLSIVKQIVELHKGKVKIESE LGKGTVVTVQLPYSKNS >Mature_577_residues MVTILAMKSRFKSIQWKIILLYSLLILVAMEIIWIYLYKSLENYHLNNFDNYLEAQAKGISFTLKDNMDIKSLKSVINMY MGPNSNIKYVYILDSHGNILASSTGDTGKMMTPAIAKALSGEMGSELTKDYYSNSTIKSFAMPIYNSEGKVSGVVYLIGS LKGIYDTLWDVNLILASATLFALIITMILGYILSKTIADPIKEVTKYAQRMAEGDFDIKINVKSDDEIGKLGEMFNFLSS RLKETLNDIQGEKNKIEAIIKFMKDGVVAADANGNIIHYNEAAEKMLNKKLSLGMPVEEVLPLKEAENPIPMTCDNRVLM INAASVKINNQVEGYVYVMHDITEQHKLDQMRKEFVANVSHELRTPLATIKSYVETLLYNDVDTEYSKKFLRIIETETDR MTRLVKDLLLLSKMDSEENSLKLEPCDFNEIVKNVVNSLSIEATKKGHNVILNLSETLQKVNVDKDKVEQMAMNIINNAI KYTPEGGVIEISTAYDEEGVTFTVKDNGIGIPKEDLPRIFERFYRVDKARSRELGGTGLGLSIVKQIVELHKGKVKIESE LGKGTVVTVQLPYSKNS
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: COG5002
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=243, Percent_Identity=39.5061728395062, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1790346, Length=255, Percent_Identity=34.1176470588235, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1788393, Length=230, Percent_Identity=31.304347826087, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI48994928, Length=446, Percent_Identity=26.457399103139, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788549, Length=378, Percent_Identity=24.6031746031746, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1790436, Length=263, Percent_Identity=28.8973384030418, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1790861, Length=219, Percent_Identity=31.0502283105023, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=29.646017699115, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789403, Length=206, Percent_Identity=33.0097087378641, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1789149, Length=222, Percent_Identity=31.0810810810811, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1786783, Length=218, Percent_Identity=31.651376146789, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1788713, Length=228, Percent_Identity=27.1929824561404, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1786912, Length=226, Percent_Identity=30.5309734513274, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87082128, Length=232, Percent_Identity=27.1551724137931, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788279, Length=221, Percent_Identity=32.579185520362, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787894, Length=226, Percent_Identity=28.7610619469027, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790567, Length=488, Percent_Identity=25.6147540983607, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790300, Length=344, Percent_Identity=26.7441860465116, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790551, Length=276, Percent_Identity=28.6231884057971, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87081816, Length=233, Percent_Identity=25.7510729613734, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1787374, Length=222, Percent_Identity=29.2792792792793, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789808, Length=223, Percent_Identity=26.0089686098655, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64889; Mature: 64889
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTILAMKSRFKSIQWKIILLYSLLILVAMEIIWIYLYKSLENYHLNNFDNYLEAQAKGI CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC SFTLKDNMDIKSLKSVINMYMGPNSNIKYVYILDSHGNILASSTGDTGKMMTPAIAKALS EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHC GEMGSELTKDYYSNSTIKSFAMPIYNSEGKVSGVVYLIGSLKGIYDTLWDVNLILASATL CHHHHHHHHHHHCCCCHHHHHCCEECCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH FALIITMILGYILSKTIADPIKEVTKYAQRMAEGDFDIKINVKSDDEIGKLGEMFNFLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH RLKETLNDIQGEKNKIEAIIKFMKDGVVAADANGNIIHYNEAAEKMLNKKLSLGMPVEEV HHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHHHCCCCCHHHH LPLKEAENPIPMTCDNRVLMINAASVKINNQVEGYVYVMHDITEQHKLDQMRKEFVANVS CCHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH HELRTPLATIKSYVETLLYNDVDTEYSKKFLRIIETETDRMTRLVKDLLLLSKMDSEENS HHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC LKLEPCDFNEIVKNVVNSLSIEATKKGHNVILNLSETLQKVNVDKDKVEQMAMNIINNAI EEECCCCHHHHHHHHHHHCEEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHH KYTPEGGVIEISTAYDEEGVTFTVKDNGIGIPKEDLPRIFERFYRVDKARSRELGGTGLG EECCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC LSIVKQIVELHKGKVKIESELGKGTVVTVQLPYSKNS HHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MVTILAMKSRFKSIQWKIILLYSLLILVAMEIIWIYLYKSLENYHLNNFDNYLEAQAKGI CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC SFTLKDNMDIKSLKSVINMYMGPNSNIKYVYILDSHGNILASSTGDTGKMMTPAIAKALS EEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHC GEMGSELTKDYYSNSTIKSFAMPIYNSEGKVSGVVYLIGSLKGIYDTLWDVNLILASATL CHHHHHHHHHHHCCCCHHHHHCCEECCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH FALIITMILGYILSKTIADPIKEVTKYAQRMAEGDFDIKINVKSDDEIGKLGEMFNFLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH RLKETLNDIQGEKNKIEAIIKFMKDGVVAADANGNIIHYNEAAEKMLNKKLSLGMPVEEV HHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHHHCCCCCHHHH LPLKEAENPIPMTCDNRVLMINAASVKINNQVEGYVYVMHDITEQHKLDQMRKEFVANVS CCHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH HELRTPLATIKSYVETLLYNDVDTEYSKKFLRIIETETDRMTRLVKDLLLLSKMDSEENS HHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC LKLEPCDFNEIVKNVVNSLSIEATKKGHNVILNLSETLQKVNVDKDKVEQMAMNIINNAI EEECCCCHHHHHHHHHHHCEEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHH KYTPEGGVIEISTAYDEEGVTFTVKDNGIGIPKEDLPRIFERFYRVDKARSRELGGTGLG EECCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC LSIVKQIVELHKGKVKIESELGKGTVVTVQLPYSKNS HHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]