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The map label for this gene is sufB [H]

Identifier: 20809016

GI number: 20809016

Start: 2570072

End: 2571475

Strand: Reverse

Name: sufB [H]

Synonym: TTE2672

Alternate gene names: 20809016

Gene position: 2571475-2570072 (Counterclockwise)

Preceding gene: 20809017

Following gene: 20809015

Centisome position: 95.61

GC content: 41.81

Gene sequence:

>1404_bases
ATGAGAAAGGAAGAGATTAGGGAGATAGATTTTAGCATATACAATATAAAGGACGAGGTTGAATACGAGTTTCAGACAGG
TAAAGGGCTTTCCAAAGAAGTAGTGCTGGAGATATCTGAACAAAAGGGTGAACCTTCATGGATGAGAGAATTTAGGCTTA
AAGCCTTAGAAATATATGAAAAAATGCCAATGCCTACATGGGGTGTAGATTTGAGTCAATTGGATATAAATTCTATTGTA
GCTTATATAAGGCCAAGTGCAAGGAAAAAGACCTCATGGGAGGAAGTACCGGAAGAGATAAGGCGAACTTTTGAAAGATT
GGGTATTCCTGAGGCAGAAAAAAAAGCTCTGGCTGGAGTAGGGGCCCAATACGATTCTGAAGTGATATACCACAACATGA
AGGAAAGCCTTGCAAGACAGGGCGTAATCTTTGAAGATATGGACACGGCCTTAAAAAAATACCCTGACATCATAAGGGAA
TATTTTATGACAAAAAATGTACTTCCGACAGACCACAAATTTGCCGCTCTTCATGCGGCAGTGTGGAGCGGCGGAACATT
TGTGTATGTGCCTGAAGGTGTAAAAGTGGAAGTTCCTTTGCAGGCGTATTTCAGGATGAATGCACCTGGTAGCGGACAGT
TTGAACACACCCTGATAATTGCCGACAGAGGAAGCGAAGTTCACTTCATAGAAGGTTGTTCAGCGCCTCTTTACTCTGTC
TCTAACCTGCACGCCGGATGTGTAGAACTTTTTGTAAAAGAAGGAGCTAGGATTATATACTCCACCATAGAAAACTGGAG
TAAAAACACTTATAATTTAAACACAAAAAGAGCGATTGTGGAAAGAGACGGAATGGTAGAGTGGATTTCCGGTTCTTTTG
GCAGTAAAAAGACAATGTTATATCCTGCTTCTGTCCTTGTGGGGAAAGGAGCAAAAGCGGAGTATACCAGTATCACTTTT
GCAGCAAAAGGCCAGCATTTGGATACAGGGGCAAAAATGATACATTTAGCTCCTTATACTTCCTCAAAAATTTTGGCCAA
GAGCATTTCAAAGGATGGAGGAATATCAACCTATAGGGGACTTTTAAAGGTAGGACCTGAGGCAGAAGGGGTAAAAGCTT
CTGTCACCTGTGAAGGATTGATGCTGGACGACATTTCTAAATCTGATACTATACCGGTCATTGATATAGAAAATGACAAT
GTAGACATCGGCCACGAGGCAAAAGTTGGGAGAATAAGCGAAGAGCAGATATACTATCTCATGTCAAGGGGCCTTAATGA
GGAAGACGCAAGGGCTATGATTGTGAGAGGTTTTGTAGAGCCCATCGCTAAAGCTCTGCCTTTAGAGTACGCAGTGGAAA
TGAACAGGTTGATAAAACTTGAGCTGGAAGGTGCAATTGGATAG

Upstream 100 bases:

>100_bases
AAGATTGTCAAAGAGGGAGATAAAGAGCTTGCTAGAATATTAGAAGAAAAGGGCTATGACTTTGTGAGAAATGGCGCATA
GCCCTTGAGGAGGAATGAGC

Downstream 100 bases:

>100_bases
GAGTGAAGCAAATGTTAAAAAGAATACCATGGGAGGAAATACAAAAACCAGCATACAAAGAGTACAATGCTTCTAAGATA
AAAGATGTAGAACAGGAAGG

Product: membrane components of an uncharacterized iron-regulated ABC-type transporter SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRKEEIREIDFSIYNIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYEKMPMPTWGVDLSQLDINSIV
AYIRPSARKKTSWEEVPEEIRRTFERLGIPEAEKKALAGVGAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPDIIRE
YFMTKNVLPTDHKFAALHAAVWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIEGCSAPLYSV
SNLHAGCVELFVKEGARIIYSTIENWSKNTYNLNTKRAIVERDGMVEWISGSFGSKKTMLYPASVLVGKGAKAEYTSITF
AAKGQHLDTGAKMIHLAPYTSSKILAKSISKDGGISTYRGLLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDIENDN
VDIGHEAKVGRISEEQIYYLMSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG

Sequences:

>Translated_467_residues
MRKEEIREIDFSIYNIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYEKMPMPTWGVDLSQLDINSIV
AYIRPSARKKTSWEEVPEEIRRTFERLGIPEAEKKALAGVGAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPDIIRE
YFMTKNVLPTDHKFAALHAAVWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIEGCSAPLYSV
SNLHAGCVELFVKEGARIIYSTIENWSKNTYNLNTKRAIVERDGMVEWISGSFGSKKTMLYPASVLVGKGAKAEYTSITF
AAKGQHLDTGAKMIHLAPYTSSKILAKSISKDGGISTYRGLLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDIENDN
VDIGHEAKVGRISEEQIYYLMSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
>Mature_467_residues
MRKEEIREIDFSIYNIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYEKMPMPTWGVDLSQLDINSIV
AYIRPSARKKTSWEEVPEEIRRTFERLGIPEAEKKALAGVGAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPDIIRE
YFMTKNVLPTDHKFAALHAAVWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIEGCSAPLYSV
SNLHAGCVELFVKEGARIIYSTIENWSKNTYNLNTKRAIVERDGMVEWISGSFGSKKTMLYPASVLVGKGAKAEYTSITF
AAKGQHLDTGAKMIHLAPYTSSKILAKSISKDGGISTYRGLLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDIENDN
VDIGHEAKVGRISEEQIYYLMSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=464, Percent_Identity=37.2844827586207, Blast_Score=318, Evalue=7e-88,
Organism=Escherichia coli, GI1787971, Length=144, Percent_Identity=32.6388888888889, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52279; Mature: 52279

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEEIREIDFSIYNIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYE
CCHHHHHHHCEEEEECCCCEEEEEECCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHH
KMPMPTWGVDLSQLDINSIVAYIRPSARKKTSWEEVPEEIRRTFERLGIPEAEKKALAGV
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPDIIREYFMTKNVLPTDHKFAALHAA
CCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIEGCSAPLYSV
HCCCCEEEEECCCCEEEECHHHEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHH
SNLHAGCVELFVKEGARIIYSTIENWSKNTYNLNTKRAIVERDGMVEWISGSFGSKKTML
HHCHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCHHHEEHHCCCCEEEECCCCCCCEEEE
YPASVLVGKGAKAEYTSITFAAKGQHLDTGAKMIHLAPYTSSKILAKSISKDGGISTYRG
EECHHEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHH
LLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDIENDNVDIGHEAKVGRISEEQIYYL
HHHCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
MSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MRKEEIREIDFSIYNIKDEVEYEFQTGKGLSKEVVLEISEQKGEPSWMREFRLKALEIYE
CCHHHHHHHCEEEEECCCCEEEEEECCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHH
KMPMPTWGVDLSQLDINSIVAYIRPSARKKTSWEEVPEEIRRTFERLGIPEAEKKALAGV
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAQYDSEVIYHNMKESLARQGVIFEDMDTALKKYPDIIREYFMTKNVLPTDHKFAALHAA
CCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VWSGGTFVYVPEGVKVEVPLQAYFRMNAPGSGQFEHTLIIADRGSEVHFIEGCSAPLYSV
HCCCCEEEEECCCCEEEECHHHEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHH
SNLHAGCVELFVKEGARIIYSTIENWSKNTYNLNTKRAIVERDGMVEWISGSFGSKKTML
HHCHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCHHHEEHHCCCCEEEECCCCCCCEEEE
YPASVLVGKGAKAEYTSITFAAKGQHLDTGAKMIHLAPYTSSKILAKSISKDGGISTYRG
EECHHEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHH
LLKVGPEAEGVKASVTCEGLMLDDISKSDTIPVIDIENDNVDIGHEAKVGRISEEQIYYL
HHHCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
MSRGLNEEDARAMIVRGFVEPIAKALPLEYAVEMNRLIKLELEGAIG
HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]