| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20809006
Identifier: 20809006
GI number: 20809006
Start: 2560444
End: 2561415
Strand: Reverse
Name: 20809006
Synonym: TTE2662
Alternate gene names: NA
Gene position: 2561415-2560444 (Counterclockwise)
Preceding gene: 20809007
Following gene: 20809005
Centisome position: 95.24
GC content: 44.03
Gene sequence:
>972_bases ATGAACAATCAGCAGAGTAAAGCCTTGGCTTTGGGTTATCTTATAAAAGTATCTACAGGAAATATAAACGCTTCCCATAC TGAAGGGAATGTAGTCATAGCTAAAAAAGTTACCTTGCCCGACGGAAGTTCTGTACCCTATTTTTCAGGTCAAGCCAAGA GGAGAATGCTAAGGGATAGGTTGGAAGATTTGGGCTTTGCCTTATCGGAAGTGGCTGCTAAGGTGAGCGGTCAGGAGGTC ACCCCTCCAGTACAGCCTTGGCGGTACATAGATGAAGACTTATTTGGCTATATGGATCCCAGCGGATCCCGCCGTCGCAC TTCCCCTGTACGGGTTTCTGCAGGCATAGGGATGTTTCCTTTCCAAGGTGACAGGGACTTAGGTACCCGCTCCTTTGAAC GCTTTGGACAGGCTGTGTCTGCTGGCGGCAATATGTTTGAAACAGAGCTTTATGCCAATCTTTTTAAAGGTAATATGCTG GTAGAACTGGATCGTGTAGGTGTGTTTTCTGATCTAGAATTAGGAGATAAACCTAAAGATATACCTGCCCATTTAGAGAA AATAGAGAAAAATGGTAGAGTTTTTTATGTGTTACCTTTAGAAGAGAGAAAAAAGCGGTTGAAAGCTCTTCTTGAAGCTT TGGGGTTACTGTGGGGTGGAGGCCGTACTGCCCGCATGCTCTCAGACCTTTCCCCTCGCTTTGTAGCTTATTCTCGTCTG ACTATAAAGCACCCAGTGTTTCTAGAAGCTTTACAGGTTAGTTACTCCGAGGGGAGATACGAACTAATTTTAGAACCCTT AATATCTGCTTTGCAGAAATTCAGTAATTACCGCCAGAACACCCTGTTCGGGTTAGAAAAAGGCTTTTTCTCAAATGAAG AAGAGATAAGGCAGAATCTTGAACCTTACGGAAAAGTAATGGATCTTTACGAAGCCATCCAAGAAGCCCAAAAGGATGTA GAGAGCCTATGA
Upstream 100 bases:
>100_bases GGTACTCCTTGGCTTAGAGTTAAAACCCTTCTTTCTATATTTGCCATGAATAGTTATCTAAGGGCTTCATCAGGAAATAA AAAAGAAGGAGGAGAAGAAT
Downstream 100 bases:
>100_bases AAGCGTTATGGTTAAAAGTAACAGTACCGGTGGCCTCTTTTAGGAGGCCACTGGACCATAATTATCAGCGGACTCTCCCC CATCCTCCTCCCACAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Autoregulator DevR Family Protein Protein; Crispr-Associated Regulatory Protein Devr Family; CRISPR-Associated Autoregulator DevR Family; DevR Family CRISPR-Associated Autoregulator
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MNNQQSKALALGYLIKVSTGNINASHTEGNVVIAKKVTLPDGSSVPYFSGQAKRRMLRDRLEDLGFALSEVAAKVSGQEV TPPVQPWRYIDEDLFGYMDPSGSRRRTSPVRVSAGIGMFPFQGDRDLGTRSFERFGQAVSAGGNMFETELYANLFKGNML VELDRVGVFSDLELGDKPKDIPAHLEKIEKNGRVFYVLPLEERKKRLKALLEALGLLWGGGRTARMLSDLSPRFVAYSRL TIKHPVFLEALQVSYSEGRYELILEPLISALQKFSNYRQNTLFGLEKGFFSNEEEIRQNLEPYGKVMDLYEAIQEAQKDV ESL
Sequences:
>Translated_323_residues MNNQQSKALALGYLIKVSTGNINASHTEGNVVIAKKVTLPDGSSVPYFSGQAKRRMLRDRLEDLGFALSEVAAKVSGQEV TPPVQPWRYIDEDLFGYMDPSGSRRRTSPVRVSAGIGMFPFQGDRDLGTRSFERFGQAVSAGGNMFETELYANLFKGNML VELDRVGVFSDLELGDKPKDIPAHLEKIEKNGRVFYVLPLEERKKRLKALLEALGLLWGGGRTARMLSDLSPRFVAYSRL TIKHPVFLEALQVSYSEGRYELILEPLISALQKFSNYRQNTLFGLEKGFFSNEEEIRQNLEPYGKVMDLYEAIQEAQKDV ESL >Mature_323_residues MNNQQSKALALGYLIKVSTGNINASHTEGNVVIAKKVTLPDGSSVPYFSGQAKRRMLRDRLEDLGFALSEVAAKVSGQEV TPPVQPWRYIDEDLFGYMDPSGSRRRTSPVRVSAGIGMFPFQGDRDLGTRSFERFGQAVSAGGNMFETELYANLFKGNML VELDRVGVFSDLELGDKPKDIPAHLEKIEKNGRVFYVLPLEERKKRLKALLEALGLLWGGGRTARMLSDLSPRFVAYSRL TIKHPVFLEALQVSYSEGRYELILEPLISALQKFSNYRQNTLFGLEKGFFSNEEEIRQNLEPYGKVMDLYEAIQEAQKDV ESL
Specific function: Unknown
COG id: COG1857
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36301; Mature: 36301
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQQSKALALGYLIKVSTGNINASHTEGNVVIAKKVTLPDGSSVPYFSGQAKRRMLRDR CCCCHHHHEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHH LEDLGFALSEVAAKVSGQEVTPPVQPWRYIDEDLFGYMDPSGSRRRTSPVRVSAGIGMFP HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC FQGDRDLGTRSFERFGQAVSAGGNMFETELYANLFKGNMLVELDRVGVFSDLELGDKPKD CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCC IPAHLEKIEKNGRVFYVLPLEERKKRLKALLEALGLLWGGGRTARMLSDLSPRFVAYSRL HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHEEEEHE TIKHPVFLEALQVSYSEGRYELILEPLISALQKFSNYRQNTLFGLEKGFFSNEEEIRQNL EECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EPYGKVMDLYEAIQEAQKDVESL CHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNQQSKALALGYLIKVSTGNINASHTEGNVVIAKKVTLPDGSSVPYFSGQAKRRMLRDR CCCCHHHHEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHH LEDLGFALSEVAAKVSGQEVTPPVQPWRYIDEDLFGYMDPSGSRRRTSPVRVSAGIGMFP HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC FQGDRDLGTRSFERFGQAVSAGGNMFETELYANLFKGNMLVELDRVGVFSDLELGDKPKD CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCC IPAHLEKIEKNGRVFYVLPLEERKKRLKALLEALGLLWGGGRTARMLSDLSPRFVAYSRL HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHEEEEHE TIKHPVFLEALQVSYSEGRYELILEPLISALQKFSNYRQNTLFGLEKGFFSNEEEIRQNL EECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EPYGKVMDLYEAIQEAQKDVESL CHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA