Definition Thermoanaerobacter tengcongensis MB4, complete genome.
Accession NC_003869
Length 2,689,445

Click here to switch to the map view.

The map label for this gene is 20809005

Identifier: 20809005

GI number: 20809005

Start: 2559725

End: 2560447

Strand: Reverse

Name: 20809005

Synonym: TTE2661

Alternate gene names: NA

Gene position: 2560447-2559725 (Counterclockwise)

Preceding gene: 20809006

Following gene: 20809004

Centisome position: 95.2

GC content: 42.32

Gene sequence:

>723_bases
ATGAAAGCGTTATGGTTAAAAGTAACAGTACCGGTGGCCTCTTTTAGGAGGCCACTGGACCATAATTATCAGCGGACTCT
CCCCCATCCTCCTCCCACAACTTTGCTGGGTTTGGCTGGCGCAGCCCTGGGATTGTCTGATTTTGAAATGTGGTCTTCTT
TTTCGCCTTTAAGAGGGATAAAAGTATCAGTAGTGGCTTTAAATAAACCAGGCTTGGCACGGGATATGTGGACTTTGAGG
AAAATTAAAGGGAATAAAATCGTGGAACTATCACCTTACTTCCGAGAACTCCTCTTTTACGCTCGTTATATCTTGCTGTA
CGGGGGTGAAGAAGAGCTACTTCAAAAGCTTAAAAAAGCTTTTATGGATCCTGTCTATCCCCTTTCTTTAGGGAGGGAAG
ATGAACTCTTACTTTTAGAAGATATGGGAATTAGTGAAATCCTGAATGGAAAGGCGGTTTTTTCAGGGACTATTTTACCT
GGCGAATTGAAACGCCTGAATTTCAAGTGGATACCTGTACCTGGAATAGAAGTGGAGCCACCTGTAGTGGAAAATTTACC
CTTGGGGTTTAACGTAGATAAAAAAGGTGTCCGTAGTCCTTTAAATATACAGCCATTCACTTTTCTTCCTTACGGGGTAG
AAATAGAAACAAAAGATATAGAGGCTTTTACTGCTCCTATTCTAGAAGGGAGGAATTTCACATGGATGCCAGGGGTCTTC
TAG

Upstream 100 bases:

>100_bases
TCTCAAATGAAGAAGAGATAAGGCAGAATCTTGAACCTTACGGAAAAGTAATGGATCTTTACGAAGCCATCCAAGAAGCC
CAAAAGGATGTAGAGAGCCT

Downstream 100 bases:

>100_bases
CTAAACCTGATGAAACACTGCTGGAACATCTTAAAAAAGTGGTAGAAGAAGGGAGAAAAATAGCCCACTTTTTAGGACTT
TCTCCCGAGATGCGTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGIKVSVVALNKPGLARDMWTLR
KIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKAFMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILP
GELKRLNFKWIPVPGIEVEPPVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF

Sequences:

>Translated_240_residues
MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGIKVSVVALNKPGLARDMWTLR
KIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKAFMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILP
GELKRLNFKWIPVPGIEVEPPVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF
>Mature_240_residues
MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGIKVSVVALNKPGLARDMWTLR
KIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKAFMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILP
GELKRLNFKWIPVPGIEVEPPVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27067; Mature: 27067

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGI
CCEEEEEEECCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC
KVSVVALNKPGLARDMWTLRKIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKA
EEEEEEECCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHEEECCHHHHHHHHHHH
FMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILPGELKRLNFKWIPVPGIEVEP
HCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCHHHCCEEEECCCCCCCCC
PVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF
CHHHCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure
MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGI
CCEEEEEEECCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC
KVSVVALNKPGLARDMWTLRKIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKA
EEEEEEECCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHEEECCHHHHHHHHHHH
FMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILPGELKRLNFKWIPVPGIEVEP
HCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCHHHCCEEEECCCCCCCCC
PVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF
CHHHCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA