| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is 20809005
Identifier: 20809005
GI number: 20809005
Start: 2559725
End: 2560447
Strand: Reverse
Name: 20809005
Synonym: TTE2661
Alternate gene names: NA
Gene position: 2560447-2559725 (Counterclockwise)
Preceding gene: 20809006
Following gene: 20809004
Centisome position: 95.2
GC content: 42.32
Gene sequence:
>723_bases ATGAAAGCGTTATGGTTAAAAGTAACAGTACCGGTGGCCTCTTTTAGGAGGCCACTGGACCATAATTATCAGCGGACTCT CCCCCATCCTCCTCCCACAACTTTGCTGGGTTTGGCTGGCGCAGCCCTGGGATTGTCTGATTTTGAAATGTGGTCTTCTT TTTCGCCTTTAAGAGGGATAAAAGTATCAGTAGTGGCTTTAAATAAACCAGGCTTGGCACGGGATATGTGGACTTTGAGG AAAATTAAAGGGAATAAAATCGTGGAACTATCACCTTACTTCCGAGAACTCCTCTTTTACGCTCGTTATATCTTGCTGTA CGGGGGTGAAGAAGAGCTACTTCAAAAGCTTAAAAAAGCTTTTATGGATCCTGTCTATCCCCTTTCTTTAGGGAGGGAAG ATGAACTCTTACTTTTAGAAGATATGGGAATTAGTGAAATCCTGAATGGAAAGGCGGTTTTTTCAGGGACTATTTTACCT GGCGAATTGAAACGCCTGAATTTCAAGTGGATACCTGTACCTGGAATAGAAGTGGAGCCACCTGTAGTGGAAAATTTACC CTTGGGGTTTAACGTAGATAAAAAAGGTGTCCGTAGTCCTTTAAATATACAGCCATTCACTTTTCTTCCTTACGGGGTAG AAATAGAAACAAAAGATATAGAGGCTTTTACTGCTCCTATTCTAGAAGGGAGGAATTTCACATGGATGCCAGGGGTCTTC TAG
Upstream 100 bases:
>100_bases TCTCAAATGAAGAAGAGATAAGGCAGAATCTTGAACCTTACGGAAAAGTAATGGATCTTTACGAAGCCATCCAAGAAGCC CAAAAGGATGTAGAGAGCCT
Downstream 100 bases:
>100_bases CTAAACCTGATGAAACACTGCTGGAACATCTTAAAAAAGTGGTAGAAGAAGGGAGAAAAATAGCCCACTTTTTAGGACTT TCTCCCGAGATGCGTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGIKVSVVALNKPGLARDMWTLR KIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKAFMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILP GELKRLNFKWIPVPGIEVEPPVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF
Sequences:
>Translated_240_residues MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGIKVSVVALNKPGLARDMWTLR KIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKAFMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILP GELKRLNFKWIPVPGIEVEPPVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF >Mature_240_residues MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGIKVSVVALNKPGLARDMWTLR KIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKAFMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILP GELKRLNFKWIPVPGIEVEPPVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF
Specific function: Unknown
COG id: COG1688
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27067; Mature: 27067
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGI CCEEEEEEECCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC KVSVVALNKPGLARDMWTLRKIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKA EEEEEEECCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHEEECCHHHHHHHHHHH FMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILPGELKRLNFKWIPVPGIEVEP HCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCHHHCCEEEECCCCCCCCC PVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF CHHHCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure MKALWLKVTVPVASFRRPLDHNYQRTLPHPPPTTLLGLAGAALGLSDFEMWSSFSPLRGI CCEEEEEEECCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC KVSVVALNKPGLARDMWTLRKIKGNKIVELSPYFRELLFYARYILLYGGEEELLQKLKKA EEEEEEECCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHEEECCHHHHHHHHHHH FMDPVYPLSLGREDELLLLEDMGISEILNGKAVFSGTILPGELKRLNFKWIPVPGIEVEP HCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCHHHCCEEEECCCCCCCCC PVVENLPLGFNVDKKGVRSPLNIQPFTFLPYGVEIETKDIEAFTAPILEGRNFTWMPGVF CHHHCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA