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The map label for this gene is gerKA [H]

Identifier: 20808904

GI number: 20808904

Start: 2443773

End: 2445371

Strand: Reverse

Name: gerKA [H]

Synonym: TTE2555

Alternate gene names: 20808904

Gene position: 2445371-2443773 (Counterclockwise)

Preceding gene: 20808905

Following gene: 20808903

Centisome position: 90.92

GC content: 41.09

Gene sequence:

>1599_bases
ATGGGGATTTTTGATAAATTTTTTAAGAAGAAAGACCAGAAGAAAGAAGAAAAAGGCAGAGCTTCTTCACCAAGTTTAAA
AGAAAATCTCAATTACATAAAGGAAAAGCTTAAAGATTGTGATGATGTTATATACAGAGACCTGTGGGTTGGAGAAAATC
AGGAGTTTAACTTGGCAGTGGTTTTTATAGATGGGCTTATTGACAAAGCTCTGGTAAATGACCATGTGATTCATTCACTT
CTTTTGGATTCGAGGCAAGCAGATCCCTCTATTGAGAAGATAAAAGGGAATCTGTACGAGGTAATAAAAAAGGGGACTAT
AAGCGGGGGAGATATAAAAGAGGTTAATGATTTAGACAAATGCATTCTTTCGATACTAAGCGGTGACACTGCGCTTTTGT
TTGATGGCTCTCCTGATATTGTCATAATATCCAGCAAAGGATGGGAGAAGAGGTCTATCTCCCCGCCAGAGGCTGAAACA
GTCATAAGAGGGGCAAGAGATGGCTTTACTGAAACTATAAGGGTAAATACTGCGATGGTTAGGAGGAGGATAAGAGATCC
GAATTTAAAAATAAAACAGATACAAATAGGTGAAAGGACTCACACAGATGTCGCTGTGCTTTATATGGAAGATATTGTGG
ATAAAAATGTTTTGAATAAAGTGATGGAGAGGCTTAAAAATATAAAAATAGACGGCATTTTTGAAAGTGGGTATATAGAG
CAGCTCATAGAAGAAGACTGGCATTCGCCTTTTCCGCAGGTTTTGAGTACAGAAAGGCCGGATAAGGTGGCGGCTTCTTT
GCTGGAGGGAAGAGTGGCTATTTTGACGGATAACACTCCTTTTGCTTTGATACTTCCAACTACTTTAGCTACCCTTTTCC
AGTCTGCAGAGGATTATTACGAGAGGTGGATGATATCATCTTTGCTAAGGGTCTTGAGATTTTTAGCGGCACTGGTGGCC
TTAACAGCTCCAGCAGTTTACATAGCTTTTACTGCTTACCATCCCGGCTTAATACCGACAAAGCTAACTCTTTACGTGGC
AGCTACTCGTCAGGGCATACCTTTTCCTGCATTTTTTGAGGCTTTGATAATGGAAGCTACTTTTGAGCTTTTAAGAGAGG
CGGGAGTTAGACTTCCTGCGCCGATAGGGCAGACAATAGGCATTGTGGGAGGTCTCATCATAGGACAGGCTGCAGTTCAG
GCGGGTATTGTGAGTCCGCTTATGGTCATTGTGGTGGCGGTAACAGCTGTGGCGTCTTTTGCTATACCCAGCTATTCAGC
AGCAATTGCTTTTAGGATGTTGAGATTTGTTTTTATGATTCTGGCAGCAATCTTTGGGCTTTACGGGATAATGCTCGGGC
TTATAATGGTTTTGACGCATCTTGTGGTGTTAAAAAGCTTTGGAGTGCCTTATCTTTCTCCTTTTGTGGAGATACATTTG
AGTGACCTTGCGGATACTTTAATACGGGCTCCCCTTATGTATTTTAAGGAGAGGCCTGAGATACTGAACACGCCTGATAA
AAGAAAAATGGTAGATTTGAGAGAAGAAAAAATAGAAAGCTTGGAAGAGGACAGGAGAGGGAGAGATGATAAAAAATAA

Upstream 100 bases:

>100_bases
CAGAGATTCAAGGATTTGCAAGGGAATAGGAATTTTTTACATATTGATAGGTGTAATTGCACTTATTCTAAGAATCCTTT
TTCCAATGTGAGGGAGTGTT

Downstream 100 bases:

>100_bases
CGACAAAATTTCTTCAAATCAAGTGGCAATCTTGCTCTTTACTACAATGGTTGGAGCAGGGATACTGAGCCTTCCTGCAG
ATGTTTCAAAGGAAGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MGIFDKFFKKKDQKKEEKGRASSPSLKENLNYIKEKLKDCDDVIYRDLWVGENQEFNLAVVFIDGLIDKALVNDHVIHSL
LLDSRQADPSIEKIKGNLYEVIKKGTISGGDIKEVNDLDKCILSILSGDTALLFDGSPDIVIISSKGWEKRSISPPEAET
VIRGARDGFTETIRVNTAMVRRRIRDPNLKIKQIQIGERTHTDVAVLYMEDIVDKNVLNKVMERLKNIKIDGIFESGYIE
QLIEEDWHSPFPQVLSTERPDKVAASLLEGRVAILTDNTPFALILPTTLATLFQSAEDYYERWMISSLLRVLRFLAALVA
LTAPAVYIAFTAYHPGLIPTKLTLYVAATRQGIPFPAFFEALIMEATFELLREAGVRLPAPIGQTIGIVGGLIIGQAAVQ
AGIVSPLMVIVVAVTAVASFAIPSYSAAIAFRMLRFVFMILAAIFGLYGIMLGLIMVLTHLVVLKSFGVPYLSPFVEIHL
SDLADTLIRAPLMYFKERPEILNTPDKRKMVDLREEKIESLEEDRRGRDDKK

Sequences:

>Translated_532_residues
MGIFDKFFKKKDQKKEEKGRASSPSLKENLNYIKEKLKDCDDVIYRDLWVGENQEFNLAVVFIDGLIDKALVNDHVIHSL
LLDSRQADPSIEKIKGNLYEVIKKGTISGGDIKEVNDLDKCILSILSGDTALLFDGSPDIVIISSKGWEKRSISPPEAET
VIRGARDGFTETIRVNTAMVRRRIRDPNLKIKQIQIGERTHTDVAVLYMEDIVDKNVLNKVMERLKNIKIDGIFESGYIE
QLIEEDWHSPFPQVLSTERPDKVAASLLEGRVAILTDNTPFALILPTTLATLFQSAEDYYERWMISSLLRVLRFLAALVA
LTAPAVYIAFTAYHPGLIPTKLTLYVAATRQGIPFPAFFEALIMEATFELLREAGVRLPAPIGQTIGIVGGLIIGQAAVQ
AGIVSPLMVIVVAVTAVASFAIPSYSAAIAFRMLRFVFMILAAIFGLYGIMLGLIMVLTHLVVLKSFGVPYLSPFVEIHL
SDLADTLIRAPLMYFKERPEILNTPDKRKMVDLREEKIESLEEDRRGRDDKK
>Mature_531_residues
GIFDKFFKKKDQKKEEKGRASSPSLKENLNYIKEKLKDCDDVIYRDLWVGENQEFNLAVVFIDGLIDKALVNDHVIHSLL
LDSRQADPSIEKIKGNLYEVIKKGTISGGDIKEVNDLDKCILSILSGDTALLFDGSPDIVIISSKGWEKRSISPPEAETV
IRGARDGFTETIRVNTAMVRRRIRDPNLKIKQIQIGERTHTDVAVLYMEDIVDKNVLNKVMERLKNIKIDGIFESGYIEQ
LIEEDWHSPFPQVLSTERPDKVAASLLEGRVAILTDNTPFALILPTTLATLFQSAEDYYERWMISSLLRVLRFLAALVAL
TAPAVYIAFTAYHPGLIPTKLTLYVAATRQGIPFPAFFEALIMEATFELLREAGVRLPAPIGQTIGIVGGLIIGQAAVQA
GIVSPLMVIVVAVTAVASFAIPSYSAAIAFRMLRFVFMILAAIFGLYGIMLGLIMVLTHLVVLKSFGVPYLSPFVEIHLS
DLADTLIRAPLMYFKERPEILNTPDKRKMVDLREEKIESLEEDRRGRDDKK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 59525; Mature: 59394

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFDKFFKKKDQKKEEKGRASSPSLKENLNYIKEKLKDCDDVIYRDLWVGENQEFNLAV
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VFIDGLIDKALVNDHVIHSLLLDSRQADPSIEKIKGNLYEVIKKGTISGGDIKEVNDLDK
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
CILSILSGDTALLFDGSPDIVIISSKGWEKRSISPPEAETVIRGARDGFTETIRVNTAMV
HHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
RRRIRDPNLKIKQIQIGERTHTDVAVLYMEDIVDKNVLNKVMERLKNIKIDGIFESGYIE
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHH
QLIEEDWHSPFPQVLSTERPDKVAASLLEGRVAILTDNTPFALILPTTLATLFQSAEDYY
HHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHH
ERWMISSLLRVLRFLAALVALTAPAVYIAFTAYHPGLIPTKLTLYVAATRQGIPFPAFFE
HHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHCCCCCCCCCEEEEEEECCCCCCCHHHHH
ALIMEATFELLREAGVRLPAPIGQTIGIVGGLIIGQAAVQAGIVSPLMVIVVAVTAVASF
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPSYSAAIAFRMLRFVFMILAAIFGLYGIMLGLIMVLTHLVVLKSFGVPYLSPFVEIHL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SDLADTLIRAPLMYFKERPEILNTPDKRKMVDLREEKIESLEEDRRGRDDKK
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GIFDKFFKKKDQKKEEKGRASSPSLKENLNYIKEKLKDCDDVIYRDLWVGENQEFNLAV
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VFIDGLIDKALVNDHVIHSLLLDSRQADPSIEKIKGNLYEVIKKGTISGGDIKEVNDLDK
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
CILSILSGDTALLFDGSPDIVIISSKGWEKRSISPPEAETVIRGARDGFTETIRVNTAMV
HHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
RRRIRDPNLKIKQIQIGERTHTDVAVLYMEDIVDKNVLNKVMERLKNIKIDGIFESGYIE
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHH
QLIEEDWHSPFPQVLSTERPDKVAASLLEGRVAILTDNTPFALILPTTLATLFQSAEDYY
HHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHH
ERWMISSLLRVLRFLAALVALTAPAVYIAFTAYHPGLIPTKLTLYVAATRQGIPFPAFFE
HHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHCCCCCCCCCEEEEEEECCCCCCCHHHHH
ALIMEATFELLREAGVRLPAPIGQTIGIVGGLIIGQAAVQAGIVSPLMVIVVAVTAVASF
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPSYSAAIAFRMLRFVFMILAAIFGLYGIMLGLIMVLTHLVVLKSFGVPYLSPFVEIHL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SDLADTLIRAPLMYFKERPEILNTPDKRKMVDLREEKIESLEEDRRGRDDKK
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]