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The map label for this gene is gerBC [H]

Identifier: 20808902

GI number: 20808902

Start: 2441538

End: 2442692

Strand: Reverse

Name: gerBC [H]

Synonym: TTE2553

Alternate gene names: 20808902

Gene position: 2442692-2441538 (Counterclockwise)

Preceding gene: 20808903

Following gene: 20808901

Centisome position: 90.83

GC content: 38.01

Gene sequence:

>1155_bases
GTGAAGCGCAAAACACTGCTTTTTATTTTACTAATTTTTCTAATTTTTGTTCTAACAGGATGCTGGGACAAAATTGAAAT
AGAGGACAGAGCTTTTGTGATGGCCATTGGCATAGATTTGTCCAACTCAAATAAAAAGTACGTGGTGACTTTTCAATTCC
CCAACGTAGCTCAGCTGGCAAAGGGTTCCGGAGGCGGAGGCAGTGGTGGAAGTGAAAAGCCGAGCTTTGCCGTGTCTGAA
GTGGCAGATACGATTTTTTCTGCCTCCCGCCACATAAGTACAAGACTGGACAAAGCCCTGTATCTTGGGCATACTCAGGC
AATCATTTTTGGAAAAGAAGTAGTAGAAAACAAAACGAGGTTTCAAGAGGTTTTAGATTCGTTAGACAGAAGTTATGAGT
TGAGTAGAAAAGTCTATCTTCTTGTCACACCTGGGAAAGCACAGGATATACTCTTAAAAAAATACGACCTCGAGCCCAAT
ACAGGAGCCTATATAAGGGATATATTTAAGCATTACAACTTGACCTCAATTTTTCCTTCTGTTGACTATAATAAAATTAC
AAAATCTCTACATGAAACAAATGGAAATGCAATAATTCCCAGAATAGTGGCCGGGAAAAATGAGGTCAAAATTGCAGGTT
CAGCTATTATCAAGGATTACAAGCTTGCCGGGTGGATGGAAGATGATGAAAACATGGGCTATATGTTTTTGACAGGCCTT
GTAAAAGGTGGAGATGTGACTGTGAGTGTGCCAGCTGATGAAGAAGAAGTAAAAGTGCCTTTTAATGTGTCAAATGTGAT
AAGAAGAAGAGGAGTTAAAGTGGAGAATGGGAAGATTATTTACAGGGTAAAGTTGGATGTAGAAGGAGATGTGACAGAGT
ATACTTTTGAAAAGCATGGTGAGATGATAAAAGGAGATATTGTGAATTTAATAGAGAGAGAAACTAGCAGGAAAATAAAA
AGTATGGCTTATAAAGCTGTAAATCGATTCCAAAAAGAACTAAAAGTCGACATGTTTGGAATTGGCGATTATATTGAGAA
ATTTTATCCCTCATTGTGGGATGAAGTTGGGAAAGATTGGGATGAAATATTTCCAGAAATAGAAATAAAAGTGGATGTGA
CTTCTCATGTGAGAAGAATAGGTCTTTTCAGGTAA

Upstream 100 bases:

>100_bases
ACGCTAATCTTGTATCTCAGTATTTATCTATATTTTTTATATCGTTTTTGCCTATCATCTTAGCTTTTTTTGTAAAACTT
AAAGGGCTGGGTGATAAAAA

Downstream 100 bases:

>100_bases
TACGTATATTTTCTCTGTAGGCTGTCAATACTTAAATTGTAAAGAATACGGTGAGAATTGGGGAGATGACAAGTTAAGAT
GAAAAAAATAATTGCGGTAC

Product: germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKRKTLLFILLIFLIFVLTGCWDKIEIEDRAFVMAIGIDLSNSNKKYVVTFQFPNVAQLAKGSGGGGSGGSEKPSFAVSE
VADTIFSASRHISTRLDKALYLGHTQAIIFGKEVVENKTRFQEVLDSLDRSYELSRKVYLLVTPGKAQDILLKKYDLEPN
TGAYIRDIFKHYNLTSIFPSVDYNKITKSLHETNGNAIIPRIVAGKNEVKIAGSAIIKDYKLAGWMEDDENMGYMFLTGL
VKGGDVTVSVPADEEEVKVPFNVSNVIRRRGVKVENGKIIYRVKLDVEGDVTEYTFEKHGEMIKGDIVNLIERETSRKIK
SMAYKAVNRFQKELKVDMFGIGDYIEKFYPSLWDEVGKDWDEIFPEIEIKVDVTSHVRRIGLFR

Sequences:

>Translated_384_residues
MKRKTLLFILLIFLIFVLTGCWDKIEIEDRAFVMAIGIDLSNSNKKYVVTFQFPNVAQLAKGSGGGGSGGSEKPSFAVSE
VADTIFSASRHISTRLDKALYLGHTQAIIFGKEVVENKTRFQEVLDSLDRSYELSRKVYLLVTPGKAQDILLKKYDLEPN
TGAYIRDIFKHYNLTSIFPSVDYNKITKSLHETNGNAIIPRIVAGKNEVKIAGSAIIKDYKLAGWMEDDENMGYMFLTGL
VKGGDVTVSVPADEEEVKVPFNVSNVIRRRGVKVENGKIIYRVKLDVEGDVTEYTFEKHGEMIKGDIVNLIERETSRKIK
SMAYKAVNRFQKELKVDMFGIGDYIEKFYPSLWDEVGKDWDEIFPEIEIKVDVTSHVRRIGLFR
>Mature_384_residues
MKRKTLLFILLIFLIFVLTGCWDKIEIEDRAFVMAIGIDLSNSNKKYVVTFQFPNVAQLAKGSGGGGSGGSEKPSFAVSE
VADTIFSASRHISTRLDKALYLGHTQAIIFGKEVVENKTRFQEVLDSLDRSYELSRKVYLLVTPGKAQDILLKKYDLEPN
TGAYIRDIFKHYNLTSIFPSVDYNKITKSLHETNGNAIIPRIVAGKNEVKIAGSAIIKDYKLAGWMEDDENMGYMFLTGL
VKGGDVTVSVPADEEEVKVPFNVSNVIRRRGVKVENGKIIYRVKLDVEGDVTEYTFEKHGEMIKGDIVNLIERETSRKIK
SMAYKAVNRFQKELKVDMFGIGDYIEKFYPSLWDEVGKDWDEIFPEIEIKVDVTSHVRRIGLFR

Specific function: Involved in the response to the germinative mixture of L-asparagine, glucose, fructose and potassium ions (AGFK). Cannot stimulate germination in the absence of gerD and gerK gene products (fructose and glucose receptors respectively) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 43496; Mature: 43496

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKTLLFILLIFLIFVLTGCWDKIEIEDRAFVMAIGIDLSNSNKKYVVTFQFPNVAQLA
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEECCCCCEEEEEEECCCHHHHH
KGSGGGGSGGSEKPSFAVSEVADTIFSASRHISTRLDKALYLGHTQAIIFGKEVVENKTR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH
FQEVLDSLDRSYELSRKVYLLVTPGKAQDILLKKYDLEPNTGAYIRDIFKHYNLTSIFPS
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHEEEEECCCCCCCHHHHHHHHHCCHHHCCCC
VDYNKITKSLHETNGNAIIPRIVAGKNEVKIAGSAIIKDYKLAGWMEDDENMGYMFLTGL
CCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEE
VKGGDVTVSVPADEEEVKVPFNVSNVIRRRGVKVENGKIIYRVKLDVEGDVTEYTFEKHG
ECCCCEEEECCCCCCCEECCCCHHHHHHHCCCEEECCEEEEEEEEECCCCCHHHHHHHCC
EMIKGDIVNLIERETSRKIKSMAYKAVNRFQKELKVDMFGIGDYIEKFYPSLWDEVGKDW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHCCCH
DEIFPEIEIKVDVTSHVRRIGLFR
HHCCCCEEEEEEHHHHHHHHCCCC
>Mature Secondary Structure
MKRKTLLFILLIFLIFVLTGCWDKIEIEDRAFVMAIGIDLSNSNKKYVVTFQFPNVAQLA
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEECCCCCEEEEEEECCCHHHHH
KGSGGGGSGGSEKPSFAVSEVADTIFSASRHISTRLDKALYLGHTQAIIFGKEVVENKTR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH
FQEVLDSLDRSYELSRKVYLLVTPGKAQDILLKKYDLEPNTGAYIRDIFKHYNLTSIFPS
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHEEEEECCCCCCCHHHHHHHHHCCHHHCCCC
VDYNKITKSLHETNGNAIIPRIVAGKNEVKIAGSAIIKDYKLAGWMEDDENMGYMFLTGL
CCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEE
VKGGDVTVSVPADEEEVKVPFNVSNVIRRRGVKVENGKIIYRVKLDVEGDVTEYTFEKHG
ECCCCEEEECCCCCCCEECCCCHHHHHHHCCCEEECCEEEEEEEEECCCCCHHHHHHHCC
EMIKGDIVNLIERETSRKIKSMAYKAVNRFQKELKVDMFGIGDYIEKFYPSLWDEVGKDW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHCCCH
DEIFPEIEIKVDVTSHVRRIGLFR
HHCCCCEEEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8012571; 9384377 [H]