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The map label for this gene is spoIIR [H]

Identifier: 20808901

GI number: 20808901

Start: 2440830

End: 2441459

Strand: Reverse

Name: spoIIR [H]

Synonym: TTE2552

Alternate gene names: 20808901

Gene position: 2441459-2440830 (Counterclockwise)

Preceding gene: 20808902

Following gene: 20808900

Centisome position: 90.78

GC content: 37.78

Gene sequence:

>630_bases
ATGAAAAAAATAATTGCGGTACTCTTAATTGCGATTATAAGTATTTTAGTAATTTCGGGTAAAACGTCAGAAAATAGGAC
AAATGTTGATAGCTGGTCAAAAAAGTTAATACGCTTTCATGTGATTGCCAACAGCGATTCTCCTGAAGACCAGGAGTTAA
AGCTCAAGGTTAGAGATGCTATTCTCGTTGAGCTAGCTCCTAAGCTTGAAGGTTTAAAGACAAAAGAGGAATCGGAAAGG
GTGATAAAGGAAAACCTGGTAAATATAGAAAAAGTGGCTGAAAAAATAATAAAAGAAGAGGGGAAAGATTATAAAGTCAG
AGTGGACTACGGGGTTTTTTCTTTTCCAACTAGATATTATGGTGCTTTGACAGTCCCAGCAGGGAAGTATACCGCCCTTA
AAGTTGTGATAGGAGAAGGTGAAGGTAAAAATTGGTGGTGTGTGGTTTTCCCGCCCCTTTGCATTGTAGATGCCAAGCAC
GGCTTTACTGACGAGAAGACGGCAGAAGAGATAATGAAATACCTTGTGAGCGAAGACAAAGAAAAATTTGATAGGAGCAA
AGTGAAGTTTAAAATAGCGGAATTGATTGAAAAATATTACTCAAAATTAAAAATGGCTCTGGCGCCTTAA

Upstream 100 bases:

>100_bases
AAGAATAGGTCTTTTCAGGTAATACGTATATTTTCTCTGTAGGCTGTCAATACTTAAATTGTAAAGAATACGGTGAGAAT
TGGGGAGATGACAAGTTAAG

Downstream 100 bases:

>100_bases
AGGCCTTGAAAAGGGCCTTTTATTTTTTAAGTGAATAATAGTTTTATTACTACAAAAAATATTTACAGACGCAAGAAAGG
AGGCAAGAGAAAATTGAGCT

Product: pro-sigma-E processing factor spoIIR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKKIIAVLLIAIISILVISGKTSENRTNVDSWSKKLIRFHVIANSDSPEDQELKLKVRDAILVELAPKLEGLKTKEESER
VIKENLVNIEKVAEKIIKEEGKDYKVRVDYGVFSFPTRYYGALTVPAGKYTALKVVIGEGEGKNWWCVVFPPLCIVDAKH
GFTDEKTAEEIMKYLVSEDKEKFDRSKVKFKIAELIEKYYSKLKMALAP

Sequences:

>Translated_209_residues
MKKIIAVLLIAIISILVISGKTSENRTNVDSWSKKLIRFHVIANSDSPEDQELKLKVRDAILVELAPKLEGLKTKEESER
VIKENLVNIEKVAEKIIKEEGKDYKVRVDYGVFSFPTRYYGALTVPAGKYTALKVVIGEGEGKNWWCVVFPPLCIVDAKH
GFTDEKTAEEIMKYLVSEDKEKFDRSKVKFKIAELIEKYYSKLKMALAP
>Mature_209_residues
MKKIIAVLLIAIISILVISGKTSENRTNVDSWSKKLIRFHVIANSDSPEDQELKLKVRDAILVELAPKLEGLKTKEESER
VIKENLVNIEKVAEKIIKEEGKDYKVRVDYGVFSFPTRYYGALTVPAGKYTALKVVIGEGEGKNWWCVVFPPLCIVDAKH
GFTDEKTAEEIMKYLVSEDKEKFDRSKVKFKIAELIEKYYSKLKMALAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 23798; Mature: 23798

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIAVLLIAIISILVISGKTSENRTNVDSWSKKLIRFHVIANSDSPEDQELKLKVRDA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCHHHEEHHHHH
ILVELAPKLEGLKTKEESERVIKENLVNIEKVAEKIIKEEGKDYKVRVDYGVFSFPTRYY
HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCEEECCHHHC
GALTVPAGKYTALKVVIGEGEGKNWWCVVFPPLCIVDAKHGFTDEKTAEEIMKYLVSEDK
EEEECCCCCEEEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCHH
EKFDRSKVKFKIAELIEKYYSKLKMALAP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIIAVLLIAIISILVISGKTSENRTNVDSWSKKLIRFHVIANSDSPEDQELKLKVRDA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCHHHEEHHHHH
ILVELAPKLEGLKTKEESERVIKENLVNIEKVAEKIIKEEGKDYKVRVDYGVFSFPTRYY
HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCEEECCHHHC
GALTVPAGKYTALKVVIGEGEGKNWWCVVFPPLCIVDAKHGFTDEKTAEEIMKYLVSEDK
EEEECCCCCEEEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCHH
EKFDRSKVKFKIAELIEKYYSKLKMALAP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]