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The map label for this gene is yfiN [H]

Identifier: 20808883

GI number: 20808883

Start: 2420328

End: 2421467

Strand: Reverse

Name: yfiN [H]

Synonym: TTE2529

Alternate gene names: 20808883

Gene position: 2421467-2420328 (Counterclockwise)

Preceding gene: 20808884

Following gene: 20808882

Centisome position: 90.04

GC content: 29.82

Gene sequence:

>1140_bases
GTGAGAGAGCTATTTTTGGTTATGAACAATACTGTAAAGTTATTTTTTAGAAGGAAAGGGAATATTATTTTATTGATTTC
TGGTATTATAATTCCACTTTTCTTTTTGCTTTTTACCTATGGTGGCAGCGGACAGCTTAGAATAGGTGTTGTAGATAAAG
ATAAAAGTCTGATTTCGGCAGATTTAATTAATTCATTGGAAAAAACGGATAAATTCAAGGTTGTTTTCTTAAAAGAAGAT
GAGATAAATGATAAAGTATCGAAAGGAAAAGTTGACAGCGCTATAGTGATTCCTCAAAGATTTGAAGAAGAAATTTTGAA
GGGAAATCCAAAGGATGTAGAGATTGTATCAATAAAAGGGGAAGAAACCACCTTATTTTTGAAAAGTTATCTTGACCGCA
AGATAAATGTTCTTTACAATTTGAGTAAGGCATCCGAAGGAAATAAAGAAAATTTTTATAAGATGTACAACCTTTATAAG
AACAGTCCTTTTAGCTTGAAAACATATATTGTTGAAGATATAGGGAAGACGGCAGTGGCAACAACAAGAAGTTTAGGATT
TTTTATAATGTTTTTGATGTTTAGTACTTTTAATATTTCTAATTTTATACTTGTGGAGAAGAGAGATAAAACTTTTTACA
GAATTTTTGCTTCTCCTTTAAAGCCAAGAACTTATTTAGCGAGCAATTTTTTGGTAAATTTGATTTTGACAGTTTTTCAA
ATAGCTTTTATACTTGCGTTGATTACCTTTATATTAAACTTAAGCTTCACAAAAGCGACATTTGATGTTTTTTTAGTACT
GGTTTCTTTTGGAATAACCTCTATTGGTTTAAGTTCAATGATAGTTGCTTTTTCACCCTCTACAAGTTATTCTAATGTCT
TGTCTACTTTAATTATTACACCTACTTGTATGTTAGGGGGAACTTTCTGGCCATTATATTTAATGCCAAAATCATTTCAA
AAGCTTTCTGATTTTATACCACAGAAATGGGCAATAGACGCTATAGAAAAAATTCAAATGGGTGGTAGTTTAAGCGATGT
TTATATGAATATAATCATACTGTTGGCTTTTGCATTAACCTTTATCCTGTTAGGAATATATAAAATTAAAACTTCTGAAA
AAATGGGAGATTTTATCTGA

Upstream 100 bases:

>100_bases
TAATTACCAATATGTACCTACAGCCCTCATGGTAAATTTAATTCCTGCAGCTTTTTTCATAGTGTTGTCGGCCTACTTAT
TCAGAAGGGAGGCTTTTTAA

Downstream 100 bases:

>100_bases
TTTATATGTTATAATCAGACAAGGGGGACGGTTCCTTTTGTCTGAATTATTATTTTTGGAGTGGATATAAATGCCTAGAA
AGTCAAGAGTTAAAAGCAAG

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRELFLVMNNTVKLFFRRKGNIILLISGIIIPLFFLLFTYGGSGQLRIGVVDKDKSLISADLINSLEKTDKFKVVFLKED
EINDKVSKGKVDSAIVIPQRFEEEILKGNPKDVEIVSIKGEETTLFLKSYLDRKINVLYNLSKASEGNKENFYKMYNLYK
NSPFSLKTYIVEDIGKTAVATTRSLGFFIMFLMFSTFNISNFILVEKRDKTFYRIFASPLKPRTYLASNFLVNLILTVFQ
IAFILALITFILNLSFTKATFDVFLVLVSFGITSIGLSSMIVAFSPSTSYSNVLSTLIITPTCMLGGTFWPLYLMPKSFQ
KLSDFIPQKWAIDAIEKIQMGGSLSDVYMNIIILLAFALTFILLGIYKIKTSEKMGDFI

Sequences:

>Translated_379_residues
MRELFLVMNNTVKLFFRRKGNIILLISGIIIPLFFLLFTYGGSGQLRIGVVDKDKSLISADLINSLEKTDKFKVVFLKED
EINDKVSKGKVDSAIVIPQRFEEEILKGNPKDVEIVSIKGEETTLFLKSYLDRKINVLYNLSKASEGNKENFYKMYNLYK
NSPFSLKTYIVEDIGKTAVATTRSLGFFIMFLMFSTFNISNFILVEKRDKTFYRIFASPLKPRTYLASNFLVNLILTVFQ
IAFILALITFILNLSFTKATFDVFLVLVSFGITSIGLSSMIVAFSPSTSYSNVLSTLIITPTCMLGGTFWPLYLMPKSFQ
KLSDFIPQKWAIDAIEKIQMGGSLSDVYMNIIILLAFALTFILLGIYKIKTSEKMGDFI
>Mature_379_residues
MRELFLVMNNTVKLFFRRKGNIILLISGIIIPLFFLLFTYGGSGQLRIGVVDKDKSLISADLINSLEKTDKFKVVFLKED
EINDKVSKGKVDSAIVIPQRFEEEILKGNPKDVEIVSIKGEETTLFLKSYLDRKINVLYNLSKASEGNKENFYKMYNLYK
NSPFSLKTYIVEDIGKTAVATTRSLGFFIMFLMFSTFNISNFILVEKRDKTFYRIFASPLKPRTYLASNFLVNLILTVFQ
IAFILALITFILNLSFTKATFDVFLVLVSFGITSIGLSSMIVAFSPSTSYSNVLSTLIITPTCMLGGTFWPLYLMPKSFQ
KLSDFIPQKWAIDAIEKIQMGGSLSDVYMNIIILLAFALTFILLGIYKIKTSEKMGDFI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42999; Mature: 42999

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS51012 ABC_TM2 ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELFLVMNNTVKLFFRRKGNIILLISGIIIPLFFLLFTYGGSGQLRIGVVDKDKSLISA
CCEEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
DLINSLEKTDKFKVVFLKEDEINDKVSKGKVDSAIVIPQRFEEEILKGNPKDVEIVSIKG
HHHHHHHCCCCEEEEEEECCCCCCHHHCCCCCCEEECHHHHHHHHHCCCCCCEEEEEECC
EETTLFLKSYLDRKINVLYNLSKASEGNKENFYKMYNLYKNSPFSLKTYIVEDIGKTAVA
CCHHHHHHHHHCHHHHHEEEEHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
TTRSLGFFIMFLMFSTFNISNFILVEKRDKTFYRIFASPLKPRTYLASNFLVNLILTVFQ
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHH
IAFILALITFILNLSFTKATFDVFLVLVSFGITSIGLSSMIVAFSPSTSYSNVLSTLIIT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCHHHEEEEECCCCCHHHHHHHHHHC
PTCMLGGTFWPLYLMPKSFQKLSDFIPQKWAIDAIEKIQMGGSLSDVYMNIIILLAFALT
CHHHHCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FILLGIYKIKTSEKMGDFI
HHHHHHHHEECCHHCCCCC
>Mature Secondary Structure
MRELFLVMNNTVKLFFRRKGNIILLISGIIIPLFFLLFTYGGSGQLRIGVVDKDKSLISA
CCEEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
DLINSLEKTDKFKVVFLKEDEINDKVSKGKVDSAIVIPQRFEEEILKGNPKDVEIVSIKG
HHHHHHHCCCCEEEEEEECCCCCCHHHCCCCCCEEECHHHHHHHHHCCCCCCEEEEEECC
EETTLFLKSYLDRKINVLYNLSKASEGNKENFYKMYNLYKNSPFSLKTYIVEDIGKTAVA
CCHHHHHHHHHCHHHHHEEEEHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
TTRSLGFFIMFLMFSTFNISNFILVEKRDKTFYRIFASPLKPRTYLASNFLVNLILTVFQ
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHH
IAFILALITFILNLSFTKATFDVFLVLVSFGITSIGLSSMIVAFSPSTSYSNVLSTLIIT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCHHHEEEEECCCCCHHHHHHHHHHC
PTCMLGGTFWPLYLMPKSFQKLSDFIPQKWAIDAIEKIQMGGSLSDVYMNIIILLAFALT
CHHHHCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FILLGIYKIKTSEKMGDFI
HHHHHHHHEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]