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The map label for this gene is yafM [C]

Identifier: 20808882

GI number: 20808882

Start: 2419454

End: 2420257

Strand: Reverse

Name: yafM [C]

Synonym: TTE2528

Alternate gene names: 20808882

Gene position: 2420257-2419454 (Counterclockwise)

Preceding gene: 20808883

Following gene: 20808881

Centisome position: 89.99

GC content: 31.72

Gene sequence:

>804_bases
ATGCCTAGAAAGTCAAGAGTTAAAAGCAAGAGTGGATATTATCATGTGATGTTGCGGGGAAATGAAAAGAAAAATATATT
TAACAATGATGATGATAAAAAGCGCTTTATAGAAATATTGGCAGAGAAAAAGCTAGACGGGAAGTTTTATTTAACTGCTT
TTTGTCTAATGAGTAACCATGTTCATTTGATGATCAAGGAAGGCAATGAAGATTTGTCAAGTTCTATTAAGAGGATTGCA
GGAACTTATGTTTCTTATTTTAATAAAAAATACGATAGGACAGGGCATTTATTTCAAGATAGGTTTAGAAGTGAGCCAGT
TGAAGATGAGAGTTACGTTATAGCATTAGTAAGATACATTCACCAGAATCCGGTAAAAGCGGGACTAGTGAAAGAAGTTT
CTGATTATAAGTGGAGCAGTTATAGCTGTTATCTTAACGATAATGATAAAATGTGTCAAATTGTAGATACAGAGTTGATT
TTAGGTATTTTCTCTGATGATAAAAAGAAAGCTATAGAACAGTTTAAGAAATATATGGAGCAGACAGAAGGCACTGAAAT
TTTTATCGACATTGAGGAAGAAAAAATGAGTACGGAAGAAGCCAAAGAGTTATTTAAAAAAATGGCAATGGAATTTGGGA
TTAAAGATATAGAAAATCTGGAAATTAAAAAACGTAAAGAATGGCATGACTTAATAAAAAAATACAGAGAAAAAACAGGA
CTTTCAATTAAAGATATTGCTTCTATTGCTGGGGTGACTAGGTATAGTATACATAAGATTTTGAAAGAAAAAGGCAAAGC
CTGA

Upstream 100 bases:

>100_bases
ACTTCTGAAAAAATGGGAGATTTTATCTGATTTATATGTTATAATCAGACAAGGGGGACGGTTCCTTTTGTCTGAATTAT
TATTTTTGGAGTGGATATAA

Downstream 100 bases:

>100_bases
CTATATAGCCTGATTAAATTTAAAAGATCAGACGGAAGGAACCGTCCCCTTTGTCTGATTGTCTGGGAAGAAAGGAGAAA
GTGTATGGGGCTTTTTGACC

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Methionine-R-Sulfoxide Reductase; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase Domain-Containing Protein

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MPRKSRVKSKSGYYHVMLRGNEKKNIFNNDDDKKRFIEILAEKKLDGKFYLTAFCLMSNHVHLMIKEGNEDLSSSIKRIA
GTYVSYFNKKYDRTGHLFQDRFRSEPVEDESYVIALVRYIHQNPVKAGLVKEVSDYKWSSYSCYLNDNDKMCQIVDTELI
LGIFSDDKKKAIEQFKKYMEQTEGTEIFIDIEEEKMSTEEAKELFKKMAMEFGIKDIENLEIKKRKEWHDLIKKYREKTG
LSIKDIASIAGVTRYSIHKILKEKGKA

Sequences:

>Translated_267_residues
MPRKSRVKSKSGYYHVMLRGNEKKNIFNNDDDKKRFIEILAEKKLDGKFYLTAFCLMSNHVHLMIKEGNEDLSSSIKRIA
GTYVSYFNKKYDRTGHLFQDRFRSEPVEDESYVIALVRYIHQNPVKAGLVKEVSDYKWSSYSCYLNDNDKMCQIVDTELI
LGIFSDDKKKAIEQFKKYMEQTEGTEIFIDIEEEKMSTEEAKELFKKMAMEFGIKDIENLEIKKRKEWHDLIKKYREKTG
LSIKDIASIAGVTRYSIHKILKEKGKA
>Mature_266_residues
PRKSRVKSKSGYYHVMLRGNEKKNIFNNDDDKKRFIEILAEKKLDGKFYLTAFCLMSNHVHLMIKEGNEDLSSSIKRIAG
TYVSYFNKKYDRTGHLFQDRFRSEPVEDESYVIALVRYIHQNPVKAGLVKEVSDYKWSSYSCYLNDNDKMCQIVDTELIL
GIFSDDKKKAIEQFKKYMEQTEGTEIFIDIEEEKMSTEEAKELFKKMAMEFGIKDIENLEIKKRKEWHDLIKKYREKTGL
SIKDIASIAGVTRYSIHKILKEKGKA

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31411; Mature: 31279

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00356 HTH_LACI_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKSRVKSKSGYYHVMLRGNEKKNIFNNDDDKKRFIEILAEKKLDGKFYLTAFCLMSNH
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
VHLMIKEGNEDLSSSIKRIAGTYVSYFNKKYDRTGHLFQDRFRSEPVEDESYVIALVRYI
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
HQNPVKAGLVKEVSDYKWSSYSCYLNDNDKMCQIVDTELILGIFSDDKKKAIEQFKKYME
HCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHEECCCCHHHHHHHHHHHHHH
QTEGTEIFIDIEEEKMSTEEAKELFKKMAMEFGIKDIENLEIKKRKEWHDLIKKYREKTG
HCCCCEEEEEECHHHCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHC
LSIKDIASIAGVTRYSIHKILKEKGKA
CCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRKSRVKSKSGYYHVMLRGNEKKNIFNNDDDKKRFIEILAEKKLDGKFYLTAFCLMSNH
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
VHLMIKEGNEDLSSSIKRIAGTYVSYFNKKYDRTGHLFQDRFRSEPVEDESYVIALVRYI
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
HQNPVKAGLVKEVSDYKWSSYSCYLNDNDKMCQIVDTELILGIFSDDKKKAIEQFKKYME
HCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHEECCCCHHHHHHHHHHHHHH
QTEGTEIFIDIEEEKMSTEEAKELFKKMAMEFGIKDIENLEIKKRKEWHDLIKKYREKTG
HCCCCEEEEEECHHHCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHC
LSIKDIASIAGVTRYSIHKILKEKGKA
CCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA