| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is MalG6 [H]
Identifier: 20808776
GI number: 20808776
Start: 2307532
End: 2308350
Strand: Reverse
Name: MalG6 [H]
Synonym: TTE2415
Alternate gene names: 20808776
Gene position: 2308350-2307532 (Counterclockwise)
Preceding gene: 20808777
Following gene: 20808775
Centisome position: 85.83
GC content: 33.09
Gene sequence:
>819_bases ATGAAAGTAAAAACTGTTTTAATTCAATTATTTTTGATACTCATATCAGTCACATGTTTGTTTCCTTTAGTATGGATGTT TTCTACTTCTCTGAAAACTCGATCGGAAGTGTATACAAGCAGAAGTCTTATTCCCTCACACTGGAATTTCGATAACTATG TCAAAGCTTGGACTGAAGGCAATTTTTCTATATATTTTCTAAACAGTGTAATATACACAATTGCTATTGTGGCGGGAGTT GTAATAGTCTCCACACTTGCAGCTTATGGCTTTGCTAGACTAGATTTTCCACTTAAGAATCTGTTCTATTATGCTTTTTT GGTGTTTATGATGATACCAATTCCCGGATCTTTTATTCCATTATATGTACTTTTAGTGAAATTAGGAATACAAAACACGA GAATAGGATATATATTGCCAATGATTAATTCAGGTTTAGCAGTGGCCATATTTATACTCAAGGGATTTTTTGAAGAAATT CCAAAAGAGCTGGAAGAAGCGGCTATTATGGATGGGTGTAATAAATTTCAGATTTACTATAAAATTATGTTTCCTTTAGC TATGCCGGCTATCTCTACAATAATAATATTCAATACACTTTCTGCATGGAATGAATATATCCTGGCGGCAGTTAATTTTA CGAATCCAAATCTTATGCCCATTCAGCAGGGGTTGGTTGTGTTTCAGGGGCAGTATTTTACTCAATATGAATTACTTATG GCTGCAAATGTTATTACTACTTTGCCCATTATATTAGTATACCTTGTCTTACAGAAGTATATAATAAAAGGAATTACAGC AGGTGCAATAAAAGGATAA
Upstream 100 bases:
>100_bases GGATATGCCACTGCTTTATCTGTTATCCTGGGATTAATGCTTTTGATCATTTCTTTGATTCAGATAAAACTGCGTAGAGA AGAATGAAGAGGTGTGCTTT
Downstream 100 bases:
>100_bases AATTTAGGAAAGGAGGGACTTTTGTGAACCTGGAAATTACTGTAATACCAGCCTATAGAGTTTCCAATCAAGTAACCCCA GAGGTGCGGATATATTCAGA
Product: sugar permeases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKVKTVLIQLFLILISVTCLFPLVWMFSTSLKTRSEVYTSRSLIPSHWNFDNYVKAWTEGNFSIYFLNSVIYTIAIVAGV VIVSTLAAYGFARLDFPLKNLFYYAFLVFMMIPIPGSFIPLYVLLVKLGIQNTRIGYILPMINSGLAVAIFILKGFFEEI PKELEEAAIMDGCNKFQIYYKIMFPLAMPAISTIIIFNTLSAWNEYILAAVNFTNPNLMPIQQGLVVFQGQYFTQYELLM AANVITTLPIILVYLVLQKYIIKGITAGAIKG
Sequences:
>Translated_272_residues MKVKTVLIQLFLILISVTCLFPLVWMFSTSLKTRSEVYTSRSLIPSHWNFDNYVKAWTEGNFSIYFLNSVIYTIAIVAGV VIVSTLAAYGFARLDFPLKNLFYYAFLVFMMIPIPGSFIPLYVLLVKLGIQNTRIGYILPMINSGLAVAIFILKGFFEEI PKELEEAAIMDGCNKFQIYYKIMFPLAMPAISTIIIFNTLSAWNEYILAAVNFTNPNLMPIQQGLVVFQGQYFTQYELLM AANVITTLPIILVYLVLQKYIIKGITAGAIKG >Mature_272_residues MKVKTVLIQLFLILISVTCLFPLVWMFSTSLKTRSEVYTSRSLIPSHWNFDNYVKAWTEGNFSIYFLNSVIYTIAIVAGV VIVSTLAAYGFARLDFPLKNLFYYAFLVFMMIPIPGSFIPLYVLLVKLGIQNTRIGYILPMINSGLAVAIFILKGFFEEI PKELEEAAIMDGCNKFQIYYKIMFPLAMPAISTIIIFNTLSAWNEYILAAVNFTNPNLMPIQQGLVVFQGQYFTQYELLM AANVITTLPIILVYLVLQKYIIKGITAGAIKG
Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=271, Percent_Identity=31.7343173431734, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1790464, Length=272, Percent_Identity=29.7794117647059, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=27.4074074074074, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30765; Mature: 30765
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKTVLIQLFLILISVTCLFPLVWMFSTSLKTRSEVYTSRSLIPSHWNFDNYVKAWTEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC NFSIYFLNSVIYTIAIVAGVVIVSTLAAYGFARLDFPLKNLFYYAFLVFMMIPIPGSFIP CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH LYVLLVKLGIQNTRIGYILPMINSGLAVAIFILKGFFEEIPKELEEAAIMDGCNKFQIYY HHHHHHHHCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIMFPLAMPAISTIIIFNTLSAWNEYILAAVNFTNPNLMPIQQGLVVFQGQYFTQYELLM HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHCCCEEECCCHHHHHHHHH AANVITTLPIILVYLVLQKYIIKGITAGAIKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKVKTVLIQLFLILISVTCLFPLVWMFSTSLKTRSEVYTSRSLIPSHWNFDNYVKAWTEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC NFSIYFLNSVIYTIAIVAGVVIVSTLAAYGFARLDFPLKNLFYYAFLVFMMIPIPGSFIP CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH LYVLLVKLGIQNTRIGYILPMINSGLAVAIFILKGFFEEIPKELEEAAIMDGCNKFQIYY HHHHHHHHCCCCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIMFPLAMPAISTIIIFNTLSAWNEYILAAVNFTNPNLMPIQQGLVVFQGQYFTQYELLM HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHCCCEEECCCHHHHHHHHH AANVITTLPIILVYLVLQKYIIKGITAGAIKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]