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The map label for this gene is MalF6 [H]

Identifier: 20808777

GI number: 20808777

Start: 2308364

End: 2309239

Strand: Reverse

Name: MalF6 [H]

Synonym: TTE2416

Alternate gene names: 20808777

Gene position: 2309239-2308364 (Counterclockwise)

Preceding gene: 20808778

Following gene: 20808776

Centisome position: 85.86

GC content: 36.07

Gene sequence:

>876_bases
ATGAGAAAAAGCCATGTTCTATCGCGACTGAGCAATATGCTTTTTGTGCTACCTGCAGTAGCATTTTTCATCACTTTTAG
TATATACCCACTTTATAAAACTTTTCAACTGAGTTTTTTTGATTGGAATGGAATTGCTCCGACGATGAATTTTGTGGGAC
TTCAAAATTATATTACTGCATTTTCGGATAAAGTTTGGTGGAAAGCTGTATATAATGGATTTTATCTTGCGGTTCTTGCG
CTGATTTTTATGAATTCACTGGCTCTGTTTCTGGCTATTTTAGTTAACAATGACATCAGAGGAGCAAGTGTGTATAGGGT
TATTTTCTATATACCCCCAATTTTATCTGGCATAGTTGTTGGATATATATGGAAATGGATATATGACCCAACGTATGGAA
TATTAAATGCAATACTTGAATATTTGCATTTAGGTTTCCTAAAACATGCTTGGTTAAGCGACGTAAAAACGGCATTATTA
TCTGTTGCAATAGCTTCAATTTGGCAGGGATTTGGAGGGTCATTCATAATATTTCTTGCAGGATTGCAGGGAATTCCACA
GGAGCTTTACGAAGCAGCTAAAGTTGATGGGGCATCAGCTTGGGAACAGTTTAGGTGGATAACATTACCACTTTTATCTA
AAACTTATACAATAGTTTCAATTTTAACAATTTTAGGAGCAATGCAGCTTCTTACTCTAGTTCTTGCCCTTACAAATGGA
GGCCCAGGGTTTGAGACAGAAGTTCCTGCCTTAAGGATTTACAAGGAAGCATTTAGCAGTTATAGATTTGGATATGCCAC
TGCTTTATCTGTTATCCTGGGATTAATGCTTTTGATCATTTCTTTGATTCAGATAAAACTGCGTAGAGAAGAATGA

Upstream 100 bases:

>100_bases
TGAGGTTGTAAAAGAAATGGATGAAGCAAATAAATAAAAAATGCCAAGGTATAACCTCATAGGGTGGTTATGCCTTGGCT
TTGAAGTGAGGTAATAGAAT

Downstream 100 bases:

>100_bases
AGAGGTGTGCTTTATGAAAGTAAAAACTGTTTTAATTCAATTATTTTTGATACTCATATCAGTCACATGTTTGTTTCCTT
TAGTATGGATGTTTTCTACT

Product: ABC-type sugar transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRKSHVLSRLSNMLFVLPAVAFFITFSIYPLYKTFQLSFFDWNGIAPTMNFVGLQNYITAFSDKVWWKAVYNGFYLAVLA
LIFMNSLALFLAILVNNDIRGASVYRVIFYIPPILSGIVVGYIWKWIYDPTYGILNAILEYLHLGFLKHAWLSDVKTALL
SVAIASIWQGFGGSFIIFLAGLQGIPQELYEAAKVDGASAWEQFRWITLPLLSKTYTIVSILTILGAMQLLTLVLALTNG
GPGFETEVPALRIYKEAFSSYRFGYATALSVILGLMLLIISLIQIKLRREE

Sequences:

>Translated_291_residues
MRKSHVLSRLSNMLFVLPAVAFFITFSIYPLYKTFQLSFFDWNGIAPTMNFVGLQNYITAFSDKVWWKAVYNGFYLAVLA
LIFMNSLALFLAILVNNDIRGASVYRVIFYIPPILSGIVVGYIWKWIYDPTYGILNAILEYLHLGFLKHAWLSDVKTALL
SVAIASIWQGFGGSFIIFLAGLQGIPQELYEAAKVDGASAWEQFRWITLPLLSKTYTIVSILTILGAMQLLTLVLALTNG
GPGFETEVPALRIYKEAFSSYRFGYATALSVILGLMLLIISLIQIKLRREE
>Mature_291_residues
MRKSHVLSRLSNMLFVLPAVAFFITFSIYPLYKTFQLSFFDWNGIAPTMNFVGLQNYITAFSDKVWWKAVYNGFYLAVLA
LIFMNSLALFLAILVNNDIRGASVYRVIFYIPPILSGIVVGYIWKWIYDPTYGILNAILEYLHLGFLKHAWLSDVKTALL
SVAIASIWQGFGGSFIIFLAGLQGIPQELYEAAKVDGASAWEQFRWITLPLLSKTYTIVSILTILGAMQLLTLVLALTNG
GPGFETEVPALRIYKEAFSSYRFGYATALSVILGLMLLIISLIQIKLRREE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=261, Percent_Identity=28.3524904214559, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789861, Length=280, Percent_Identity=26.0714285714286, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=30.3149606299213, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32803; Mature: 32803

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]