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The map label for this gene is yacP [H]

Identifier: 20808678

GI number: 20808678

Start: 2193951

End: 2194454

Strand: Reverse

Name: yacP [H]

Synonym: TTE2312

Alternate gene names: 20808678

Gene position: 2194454-2193951 (Counterclockwise)

Preceding gene: 20808679

Following gene: 20808677

Centisome position: 81.6

GC content: 39.29

Gene sequence:

>504_bases
ATGCCCTTGTATATGCTGGTAGACGGTTATAATGTCATAAACAACTGGCAGATGCTCAAGGAAATTGCAAAGAGAAGTCT
GGAAGATGCGAGAGACAAATTAATAGATTTGCTGGCAGATTTTAAAGGATATACAGGCATAAATATAATATTGGTTTTCG
ATGCCATGTATGTAAAAGGGAGTTTGGAAAAGCATGAAGAGATAAATGGCATTGAAGTAGTGTACACAAAAGAAGGAGAA
TCGGCAGACCATTTTATAGAGTCGAAAGTGGTAGAGCTCGTCAAAAAAGAGGATGTGGTAGTGGTAAGCTCAGACTGGAT
TGTGCAGCAGGTAGTCATGGCTCACGGTGCCATTAGGATGTCAGCTAGGGAACTTTACGAGGAGATGAACAGGTACATTG
AAAAGCACAAAAAGGAGTATATGAATACTTTTTACAAGGACAATCTGGAAAATAGGTTAGATGAGGAAACTGTAAAGAAG
CTTCGTCAAATGAGGGAAAACTAG

Upstream 100 bases:

>100_bases
TTAAAATTCCCATGAAGGGTAAAATCAATTCTCTTAACGCTTCTGTTGCTGCTTCTATTTTGATGTACAACATTTTATCA
AAAAGGCAAGGTAAGGCGTG

Downstream 100 bases:

>100_bases
TAAAATTAGCTTGACTACCTTTACCAATATAATGTATAATTATAACGTGTAAGGTTGCGGGAATAACAAATGGGGGCGGT
ATTAGTGAAATCTGGGGCGC

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPLYMLVDGYNVINNWQMLKEIAKRSLEDARDKLIDLLADFKGYTGINIILVFDAMYVKGSLEKHEEINGIEVVYTKEGE
SADHFIESKVVELVKKEDVVVVSSDWIVQQVVMAHGAIRMSARELYEEMNRYIEKHKKEYMNTFYKDNLENRLDEETVKK
LRQMREN

Sequences:

>Translated_167_residues
MPLYMLVDGYNVINNWQMLKEIAKRSLEDARDKLIDLLADFKGYTGINIILVFDAMYVKGSLEKHEEINGIEVVYTKEGE
SADHFIESKVVELVKKEDVVVVSSDWIVQQVVMAHGAIRMSARELYEEMNRYIEKHKKEYMNTFYKDNLENRLDEETVKK
LRQMREN
>Mature_166_residues
PLYMLVDGYNVINNWQMLKEIAKRSLEDARDKLIDLLADFKGYTGINIILVFDAMYVKGSLEKHEEINGIEVVYTKEGES
ADHFIESKVVELVKKEDVVVVSSDWIVQQVVMAHGAIRMSARELYEEMNRYIEKHKKEYMNTFYKDNLENRLDEETVKKL
RQMREN

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 19686; Mature: 19555

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYMLVDGYNVINNWQMLKEIAKRSLEDARDKLIDLLADFKGYTGINIILVFDAMYVKG
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
SLEKHEEINGIEVVYTKEGESADHFIESKVVELVKKEDVVVVSSDWIVQQVVMAHGAIRM
CCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHH
SARELYEEMNRYIEKHKKEYMNTFYKDNLENRLDEETVKKLRQMREN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PLYMLVDGYNVINNWQMLKEIAKRSLEDARDKLIDLLADFKGYTGINIILVFDAMYVKG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
SLEKHEEINGIEVVYTKEGESADHFIESKVVELVKKEDVVVVSSDWIVQQVVMAHGAIRM
CCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHH
SARELYEEMNRYIEKHKKEYMNTFYKDNLENRLDEETVKKLRQMREN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]