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The map label for this gene is XerC3 [C]

Identifier: 20808517

GI number: 20808517

Start: 2041737

End: 2042912

Strand: Direct

Name: XerC3 [C]

Synonym: TTE2127

Alternate gene names: 20808517

Gene position: 2041737-2042912 (Clockwise)

Preceding gene: 20808516

Following gene: 20808519

Centisome position: 75.92

GC content: 32.14

Gene sequence:

>1176_bases
ATGGCTAAGAAGACGAATTATGTTAAAAACGGAAAAGAGTATTACCGTGTAACAGTTACTATTGGGAGAGATGAAAATGG
AAAGCTAATACGTAAAGAATTTTATGGAAAAACAAAAAAGGAAGCTGAAGCAAAGAAAGAAGAATATTTAAACGGAATAA
GAAACGGATTGAATGTTGATTTTCAAGATGTTACTTTGGGAGATTTAATGCATACATGGCTTTTTGAAGTAGTGAGAATG
TCAAGAAAGCCTGCTACGTTTGTGAAATATGAAGGACATTATAGAAATTACATAAAAAATAGTGAACTATATGGAATGAA
AATCAGTATCATAAAGTCGATACAAATACAGAGGTATTACAACAAGCTATATCAGCAAGGGAAAAGCAGTAAAACAATAA
AAGCTTTGAACAATTTTTTGAAGACGTTTTTTAATTATGCAGTAGATGAAGGATATTTAGCTAAAAATCCATGCACAGGG
AAGAAAATAGTTATACCCGGTACTCCAGAAGAAAAAATTGAAACAGAAATTGAAACTTTTTCTGATGAGGAAATAAAGAA
AATTAAAGAAGCATTAAAAGGGCATCGTCTGAAGGCACTGTTTTTGCTGGCTTTTGGAACAGGTCTAAGGCAGGGAGAAT
TGTTGGGATTGAAATGGACAGATATTGACTTTGAAAAAAAGGAATTAAGGGTTCAGCGTATGATTAAACAAGTTACTATT
ATTGATGAAAAAGGAAATAGAAAATATAAAACTATTGAACAAATACCAAAAACAAAAAACAGCATAAGGACAGTTCCAAT
TCCATCATCACTTATACCAATGCTAAAGGAGCACAGAAATAGGCAAAGGGAAGAAAAATTAAAGGCAGGCTCAGTCTACC
TCAATGATGTTGAAAAAGGATATGTGTTTACAACAGAATTGGGCAATACTATAGATGCAAGTAACCTTTTAAAGACATAT
AAAAAAATTTTAAATAGAGCAGGAGTACCTTATAGAAAATTTCATGCCATACGACACACGTATGCAACAAAACTATTTGA
AAGGGGCGTACCACTCAAAACAGTATCAGAATTATTAGGGCACTCCAACATCTCTATCACAGCAAATATTTATACTCATG
TAATACCTAAACAAAAAACTAACGCAGTAGAAACACTAAATGACCTTTTTATTTAG

Upstream 100 bases:

>100_bases
CAGTATCCCACATTGCTGCTGTTCTGGGTGTTAGTGAAGGACTTGTAAAATATAAACTTTTAAAGTTTTTATAAAAAAAT
TTTACGCAGGAGGAGATGTT

Downstream 100 bases:

>100_bases
AAAAACAGCTTTTTAAAGGCTTTGTTTTATTCCCACACTTTTCCCACAAAAGTTTTAGAAAGTTATAGAATGTTTTAGTA
CGTTAAAGTACAAAAAAGCA

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MAKKTNYVKNGKEYYRVTVTIGRDENGKLIRKEFYGKTKKEAEAKKEEYLNGIRNGLNVDFQDVTLGDLMHTWLFEVVRM
SRKPATFVKYEGHYRNYIKNSELYGMKISIIKSIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTG
KKIVIPGTPEEKIETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVTI
IDEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKAGSVYLNDVEKGYVFTTELGNTIDASNLLKTY
KKILNRAGVPYRKFHAIRHTYATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLNDLFI

Sequences:

>Translated_391_residues
MAKKTNYVKNGKEYYRVTVTIGRDENGKLIRKEFYGKTKKEAEAKKEEYLNGIRNGLNVDFQDVTLGDLMHTWLFEVVRM
SRKPATFVKYEGHYRNYIKNSELYGMKISIIKSIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTG
KKIVIPGTPEEKIETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVTI
IDEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKAGSVYLNDVEKGYVFTTELGNTIDASNLLKTY
KKILNRAGVPYRKFHAIRHTYATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLNDLFI
>Mature_390_residues
AKKTNYVKNGKEYYRVTVTIGRDENGKLIRKEFYGKTKKEAEAKKEEYLNGIRNGLNVDFQDVTLGDLMHTWLFEVVRMS
RKPATFVKYEGHYRNYIKNSELYGMKISIIKSIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGK
KIVIPGTPEEKIETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVTII
DEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKAGSVYLNDVEKGYVFTTELGNTIDASNLLKTYK
KILNRAGVPYRKFHAIRHTYATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLNDLFI

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily

Homologues:

Organism=Escherichia coli, GI1787607, Length=313, Percent_Identity=25.8785942492013, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XERCL_THETN (Q8R890)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623688.1
- ProteinModelPortal:   Q8R890
- SMR:   Q8R890
- GeneID:   997430
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE2127
- NMPDR:   fig|273068.3.peg.2231
- HOGENOM:   HBG728231
- OMA:   EGVHVAD
- ProtClustDB:   CLSK901554
- BioCyc:   TTEN273068:TTE2127-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01808
- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- Gene3D:   G3DSA:1.10.150.130
- Gene3D:   G3DSA:1.10.443.10

Pfam domain/function: PF00589 Phage_integrase; SSF56349 DNA_brk_join_enz

EC number: NA

Molecular weight: Translated: 45309; Mature: 45178

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: ACT_SITE 210-210 ACT_SITE 244-244 ACT_SITE 335-335 ACT_SITE 338-338 ACT_SITE 361-361 ACT_SITE 371-371

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKTNYVKNGKEYYRVTVTIGRDENGKLIRKEFYGKTKKEAEAKKEEYLNGIRNGLNVD
CCCCCCCHHCCCEEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
FQDVTLGDLMHTWLFEVVRMSRKPATFVKYEGHYRNYIKNSELYGMKISIIKSIQIQRYY
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEHHHHHHHHHHHH
NKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTPEEKIETEIETF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHC
SDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVTI
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHEE
IDEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKAGSVYLNDVEKG
EECCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
YVFTTELGNTIDASNLLKTYKKILNRAGVPYRKFHAIRHTYATKLFERGVPLKTVSELLG
EEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
HSNISITANIYTHVIPKQKTNAVETLNDLFI
CCCCEEEEEEHEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AKKTNYVKNGKEYYRVTVTIGRDENGKLIRKEFYGKTKKEAEAKKEEYLNGIRNGLNVD
CCCCCCHHCCCEEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
FQDVTLGDLMHTWLFEVVRMSRKPATFVKYEGHYRNYIKNSELYGMKISIIKSIQIQRYY
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEHHHHHHHHHHHH
NKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTPEEKIETEIETF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHC
SDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVTI
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHEE
IDEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKAGSVYLNDVEKG
EECCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
YVFTTELGNTIDASNLLKTYKKILNRAGVPYRKFHAIRHTYATKLFERGVPLKTVSELLG
EEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
HSNISITANIYTHVIPKQKTNAVETLNDLFI
CCCCEEEEEEHEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336