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The map label for this gene is 20808408

Identifier: 20808408

GI number: 20808408

Start: 1954305

End: 1955345

Strand: Reverse

Name: 20808408

Synonym: TTE2005

Alternate gene names: NA

Gene position: 1955345-1954305 (Counterclockwise)

Preceding gene: 20808409

Following gene: 20808407

Centisome position: 72.7

GC content: 33.05

Gene sequence:

>1041_bases
TTGGATGCGATTTTAGAAAAAAAGAACTTGTACATTTTGGGATTGGCTATTGGAATCAGCTTGATATCAATTGTATTGGT
TTTGAAATTTACAGGGATAACTAATATAGAAAAAGCCTTTGATATTCCGCTTTTTTACATTATAACGATTTTTGCTGTGA
TAATAGCAAGCCTTGTGGTGGATACTTTGCGAGTAAAAGATTTGTTGAAGAAGTTAGGAGAAGACCTCTGTTTTAGTTAC
CTTTTTAAGTTTAATCTTGCTACTTTTTTCATAAGCTATGTAACTCCTTTTGGGTCAGGAGTACTACCTTTAATGATCTA
TTTGCTTAACAAAAAGGGAGTGTCAGCTAATAAGGCTTTAATCGTATTTACGGCAAAACTTTTGTTTTCGGGGATATTTT
TTGTTACTATCCCTCCCTTTCTTCTAATTTTTTTTGGAAGGTATTTAGAATTAGGAAGTTTTTTGATGAGATTAGCTATT
TTTGTAACTTTCTTTTTAATAGGGCTTTTGATTTTGCTCCTTTACATCATTTTAAGACCTCATTTTCTTATTGAAATTGT
TGAAAGATTGGAAAGAATCTCTTTTGCCAAAAGATACATAAAGGAAGATTACTTTAAAAAGACTAAGGAAGAAATTTTGC
TTTATCACAAGAACTTTCGCAATTTATTTGCTTCTTTTTCAGGGTACAGGGTATTTATTTGGCAGTTTTTATATGCTGTT
ATATACTGGATGCTTTTTTACAGCATTGCTCCTCTTTTGCTTATGGCCATGAAAATTCCATTTGACTTTTTGGCGGTTGT
AGGAAGGCAAATCATCTTTTATGATGTACTGGCTTATAGCTTTATTCCAAGCGGTTCTGGCACAGTAGAGTTGGGATTTG
CAGCGATTTTTTCAAATATCTTGCCGACTTCATATGTGGGTGTTTTTATTGGCATGTGGAGATTTTTTACCTATTACGTA
TATCTGGGCCTTTCTGCTTTAGGATTTTTTGCAGCAGTGAGGGATGCCAAAAAGGAGATTGTCAATCAAATAACAAATTG
A

Upstream 100 bases:

>100_bases
AGATAATGCACAGGCACTTGACAGGATAATTAAAAGCATCAAAGAGGAAGGATATGAATTTAAGACATTAGATGATATTC
CGTAAAAGAGGGGAATTGCT

Downstream 100 bases:

>100_bases
TATTAATTATCATGTGAATAGACAACCCTTGGTATTTTTTATCAAGGGTTTATTTTTTTATGGGCTTTTTCCTTGATTTC
TTTTTGGCACAGTTTTTGCA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MDAILEKKNLYILGLAIGISLISIVLVLKFTGITNIEKAFDIPLFYIITIFAVIIASLVVDTLRVKDLLKKLGEDLCFSY
LFKFNLATFFISYVTPFGSGVLPLMIYLLNKKGVSANKALIVFTAKLLFSGIFFVTIPPFLLIFFGRYLELGSFLMRLAI
FVTFFLIGLLILLLYIILRPHFLIEIVERLERISFAKRYIKEDYFKKTKEEILLYHKNFRNLFASFSGYRVFIWQFLYAV
IYWMLFYSIAPLLLMAMKIPFDFLAVVGRQIIFYDVLAYSFIPSGSGTVELGFAAIFSNILPTSYVGVFIGMWRFFTYYV
YLGLSALGFFAAVRDAKKEIVNQITN

Sequences:

>Translated_346_residues
MDAILEKKNLYILGLAIGISLISIVLVLKFTGITNIEKAFDIPLFYIITIFAVIIASLVVDTLRVKDLLKKLGEDLCFSY
LFKFNLATFFISYVTPFGSGVLPLMIYLLNKKGVSANKALIVFTAKLLFSGIFFVTIPPFLLIFFGRYLELGSFLMRLAI
FVTFFLIGLLILLLYIILRPHFLIEIVERLERISFAKRYIKEDYFKKTKEEILLYHKNFRNLFASFSGYRVFIWQFLYAV
IYWMLFYSIAPLLLMAMKIPFDFLAVVGRQIIFYDVLAYSFIPSGSGTVELGFAAIFSNILPTSYVGVFIGMWRFFTYYV
YLGLSALGFFAAVRDAKKEIVNQITN
>Mature_346_residues
MDAILEKKNLYILGLAIGISLISIVLVLKFTGITNIEKAFDIPLFYIITIFAVIIASLVVDTLRVKDLLKKLGEDLCFSY
LFKFNLATFFISYVTPFGSGVLPLMIYLLNKKGVSANKALIVFTAKLLFSGIFFVTIPPFLLIFFGRYLELGSFLMRLAI
FVTFFLIGLLILLLYIILRPHFLIEIVERLERISFAKRYIKEDYFKKTKEEILLYHKNFRNLFASFSGYRVFIWQFLYAV
IYWMLFYSIAPLLLMAMKIPFDFLAVVGRQIIFYDVLAYSFIPSGSGTVELGFAAIFSNILPTSYVGVFIGMWRFFTYYV
YLGLSALGFFAAVRDAKKEIVNQITN

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 39794; Mature: 39794

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]