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The map label for this gene is Prc [H]

Identifier: 20808378

GI number: 20808378

Start: 1923298

End: 1924494

Strand: Reverse

Name: Prc [H]

Synonym: TTE1974

Alternate gene names: 20808378

Gene position: 1924494-1923298 (Counterclockwise)

Preceding gene: 20808379

Following gene: 20808377

Centisome position: 71.56

GC content: 40.77

Gene sequence:

>1197_bases
ATGTCAAAGAAAAGATTTTATGTCTTGCTGGCAGTTTTATTGATAGTAACGAACGTTTTTACTTTTTTCATAGCTAATAC
GGTGTCAGTGGCTCTGCCAGGAGGAAAGGTTATCGTTTCAAGGGAAGATTACCGGCTTTTGAACCAGTATAAAAAGCTCT
TTGAAGTAGGTAAAATACTGGAGAGCAGGTATGTGGATAAAGTAAATCCGTCGACGCTCTTAGAAGGAGCCTTAAAAGGC
ATGGCTGGTTCTCTGCAGGACCCATATACAGTGTACATGAATAAAAAAGAGTTTGCGGAGTTTATGACGCAGACCACAGG
AACTTATGGTGGCATAGGCATAATAGTGGCTGTAGACCAGGAAGACCACATCGTAGTAGTTTCTCCAATAAAGAATACCC
CTGGGGAAAGGGCAGGAATTAAATCTGGAGACATAATATTAGAGGTGAACGGCAAAAAAGTGAGTGGTAAGAATCTGGAT
GAAGCAGTGTCTATGATGAGAGGGCCTAAGGGGACGCAGGTTACTCTAACTATAATGAGGGATGGAAAGACTTTTACAAA
GACCATAACTAGGGAAATAATAAAACTGGAAACAGTTTTTGACTACATGTTGCCTGACAAGATTGGATACATTAAGATAA
CCCTTTTTGACCAGAGCACTTCTTCTGATTTCAAAAAGGCTCTGGAGCGGCTTAAAAAAGATGGAATGAAAGGACTCATA
ATTGATTTAAGGGATAATCCTGGCGGGCTTTTAGAAGAGTGCGTAAATATAGCTGATATGCTTTTGCCGAAAGGAGTAAT
AGTCACTACAAAAGGTAGGGCAGAAAGTCAGGAATTTTATTCAAAAGGTACGGGGCTTGGCATGCCTTTAGTCGTCCTTG
TAAACAAGGGAAGTGCTAGTGCTTCCGAGATTCTGGCAGGCGCCATTAAGGATAGAAAAGCAGGAGTGTTAGTAGGGACA
ACTACTTTTGGAAAAGGCCTTGTGCAGACTGTTGTCAACTTTGGAGATGGAACAGGGCTTAAATACACTATAGCAAGGTA
CTACACTCCAAATGGGACAGATATACAAGGAAAAGGCATTGAGCCAAACTATGTGGTAGAACTGCCTAAAGACTACACTT
TAAAGGACACTCCTGACCTAAAAGGAGATACTCAGCTTATAAAAGCTTATGAGATAATAAAGTCTGAGATAAAGTAG

Upstream 100 bases:

>100_bases
GTTCCAGTGAATCCAATGGACTGGCTTAAATAGCCTGTCTGTTTTTTTTATTAGCAGAATGTTGTATAATAAAGAGGAGA
CTAAAAAAGGTGGGGGAAAG

Downstream 100 bases:

>100_bases
GGTGTTAAGATGAATACACTTTTTCAGGTCGCTTGGATTGTTATAGAGACAATTGCTCTTTCTGTTTTTTCTCCTTTTTT
CTGGATTGTTATAATACTTG

Product: periplasmic protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSKKRFYVLLAVLLIVTNVFTFFIANTVSVALPGGKVIVSREDYRLLNQYKKLFEVGKILESRYVDKVNPSTLLEGALKG
MAGSLQDPYTVYMNKKEFAEFMTQTTGTYGGIGIIVAVDQEDHIVVVSPIKNTPGERAGIKSGDIILEVNGKKVSGKNLD
EAVSMMRGPKGTQVTLTIMRDGKTFTKTITREIIKLETVFDYMLPDKIGYIKITLFDQSTSSDFKKALERLKKDGMKGLI
IDLRDNPGGLLEECVNIADMLLPKGVIVTTKGRAESQEFYSKGTGLGMPLVVLVNKGSASASEILAGAIKDRKAGVLVGT
TTFGKGLVQTVVNFGDGTGLKYTIARYYTPNGTDIQGKGIEPNYVVELPKDYTLKDTPDLKGDTQLIKAYEIIKSEIK

Sequences:

>Translated_398_residues
MSKKRFYVLLAVLLIVTNVFTFFIANTVSVALPGGKVIVSREDYRLLNQYKKLFEVGKILESRYVDKVNPSTLLEGALKG
MAGSLQDPYTVYMNKKEFAEFMTQTTGTYGGIGIIVAVDQEDHIVVVSPIKNTPGERAGIKSGDIILEVNGKKVSGKNLD
EAVSMMRGPKGTQVTLTIMRDGKTFTKTITREIIKLETVFDYMLPDKIGYIKITLFDQSTSSDFKKALERLKKDGMKGLI
IDLRDNPGGLLEECVNIADMLLPKGVIVTTKGRAESQEFYSKGTGLGMPLVVLVNKGSASASEILAGAIKDRKAGVLVGT
TTFGKGLVQTVVNFGDGTGLKYTIARYYTPNGTDIQGKGIEPNYVVELPKDYTLKDTPDLKGDTQLIKAYEIIKSEIK
>Mature_397_residues
SKKRFYVLLAVLLIVTNVFTFFIANTVSVALPGGKVIVSREDYRLLNQYKKLFEVGKILESRYVDKVNPSTLLEGALKGM
AGSLQDPYTVYMNKKEFAEFMTQTTGTYGGIGIIVAVDQEDHIVVVSPIKNTPGERAGIKSGDIILEVNGKKVSGKNLDE
AVSMMRGPKGTQVTLTIMRDGKTFTKTITREIIKLETVFDYMLPDKIGYIKITLFDQSTSSDFKKALERLKKDGMKGLII
DLRDNPGGLLEECVNIADMLLPKGVIVTTKGRAESQEFYSKGTGLGMPLVVLVNKGSASASEILAGAIKDRKAGVLVGTT
TFGKGLVQTVVNFGDGTGLKYTIARYYTPNGTDIQGKGIEPNYVVELPKDYTLKDTPDLKGDTQLIKAYEIIKSEIK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=34.2182890855457, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 43557; Mature: 43426

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKRFYVLLAVLLIVTNVFTFFIANTVSVALPGGKVIVSREDYRLLNQYKKLFEVGKIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHH
ESRYVDKVNPSTLLEGALKGMAGSLQDPYTVYMNKKEFAEFMTQTTGTYGGIGIIVAVDQ
HHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEEEEECC
EDHIVVVSPIKNTPGERAGIKSGDIILEVNGKKVSGKNLDEAVSMMRGPKGTQVTLTIMR
CCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEECCCCHHHHHHHHHCCCCCEEEEEEEE
DGKTFTKTITREIIKLETVFDYMLPDKIGYIKITLFDQSTSSDFKKALERLKKDGMKGLI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEE
IDLRDNPGGLLEECVNIADMLLPKGVIVTTKGRAESQEFYSKGTGLGMPLVVLVNKGSAS
EEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCC
ASEILAGAIKDRKAGVLVGTTTFGKGLVQTVVNFGDGTGLKYTIARYYTPNGTDIQGKGI
HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEECCCC
EPNYVVELPKDYTLKDTPDLKGDTQLIKAYEIIKSEIK
CCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKRFYVLLAVLLIVTNVFTFFIANTVSVALPGGKVIVSREDYRLLNQYKKLFEVGKIL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHH
ESRYVDKVNPSTLLEGALKGMAGSLQDPYTVYMNKKEFAEFMTQTTGTYGGIGIIVAVDQ
HHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEEEEECC
EDHIVVVSPIKNTPGERAGIKSGDIILEVNGKKVSGKNLDEAVSMMRGPKGTQVTLTIMR
CCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEECCCCHHHHHHHHHCCCCCEEEEEEEE
DGKTFTKTITREIIKLETVFDYMLPDKIGYIKITLFDQSTSSDFKKALERLKKDGMKGLI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEE
IDLRDNPGGLLEECVNIADMLLPKGVIVTTKGRAESQEFYSKGTGLGMPLVVLVNKGSAS
EEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCC
ASEILAGAIKDRKAGVLVGTTTFGKGLVQTVVNFGDGTGLKYTIARYYTPNGTDIQGKGI
HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEECCCC
EPNYVVELPKDYTLKDTPDLKGDTQLIKAYEIIKSEIK
CCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]