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The map label for this gene is DegQ [H]

Identifier: 20808377

GI number: 20808377

Start: 1922044

End: 1923288

Strand: Reverse

Name: DegQ [H]

Synonym: TTE1973

Alternate gene names: 20808377

Gene position: 1923288-1922044 (Counterclockwise)

Preceding gene: 20808378

Following gene: 20808376

Centisome position: 71.51

GC content: 42.09

Gene sequence:

>1245_bases
ATGAATACACTTTTTCAGGTCGCTTGGATTGTTATAGAGACAATTGCTCTTTCTGTTTTTTCTCCTTTTTTCTGGATTGT
TATAATACTTGTAATAATGCAGTACAGAAACAAAATAGCCATAGAGAGAGAAATAATGGGGATAGAGCAGGAACCGATAA
AAGAGCTTGTGCTCGATTCCGTCTTCTACGGAGTGATAGCTGCGACTATAGGAAGCTTCATAATGGTGTTTTTAGGGATA
ACAATTGAGAACATAGGCCTTCAATACGTTTGGCCTTTAGCTATACTTCTCATGTTTATAAGCCCGAGATACATTTGCTT
TTCCTACTCTGGAGGAATTGTGTCCCTTATAAGCCTCATTTTTGGAGTCCCTAAGATAAGCGTTCCTGCTCTAATGGCTA
TTGTGGGGATTCTCCATCTCATGGAAAGCCTTCTAATATACATAGATGGGTGGAGGACTCCCACCCCCATTTTTATAAGG
CTCAAGGATGGAAGGATTGCTGGCGGTTTTACAATGCAGAAGTTTTGGCCCATACCTTTTGCGGCCTTAACAGTAGTGAC
GGCTACTAATATGACAGGAGAGTTAATCCACATGCCAGACTGGTGGCCCGTGTTAAAGCCGGAAGGCATAGACCCTGCTA
CGGCAGTTTTTTTGATAATACCTGCTGTGGCGGCGCTGGGGTATGGGGATTTAGCGCTTGCACAGCTTCCTGAAGAAAAG
ACAAAACTGTCCTCTAAGCGGTTGTTTCTCTTTAGTGGGACGCTCATACTTTTTGCTGTTCTTGGAATTTATGAGAAGGT
TTTTCAATATATAGCTGCGCTGTTTGCACCTATTGCCCATGAACTTTTGATAATAATAGGGCAGAGGGAAGAGAGAGAAA
AACCTCCTATATTCGTGGCTCCTGATACTGGGCTTATGGTTTTGACCACTGCAAAGGGCTCTCCAGCAAGACAAATGGGT
ATAAGGCCAGGAGACGTTATTTTAAGTGTAAATGGTGCTCCTGTGAATGAGCCTGAAGACATAATAAGGGTTATAGAGGA
TAGGCCGACAATGCTATGGATTACTGTGAAAGACCTGAAGGGCCATTACACCAGTTACGAGTATAGAGATCCAGAAGGGG
TATACAGTTTAGGGGTTTTGGTGGTGCCTAAAACAGTGGGAATTGTGTACGACATAAATGAAGATGGGATCATTCTAAAA
AAGCTTAAAAGCATCTTTAGAAATATCTTCAAAAAGGGAGAATAA

Upstream 100 bases:

>100_bases
TAAAGACTACACTTTAAAGGACACTCCTGACCTAAAAGGAGATACTCAGCTTATAAAAGCTTATGAGATAATAAAGTCTG
AGATAAAGTAGGGTGTTAAG

Downstream 100 bases:

>100_bases
GGGGGTCTTTAGAGTGTTTTTGCAAACTTATGAGACGTACAATTCTATAAACGACAGAGATTTAAAAGAAAAAAATGTCG
TCGTTATAGATACGTTGAGA

Product: trypsin-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNTLFQVAWIVIETIALSVFSPFFWIVIILVIMQYRNKIAIEREIMGIEQEPIKELVLDSVFYGVIAATIGSFIMVFLGI
TIENIGLQYVWPLAILLMFISPRYICFSYSGGIVSLISLIFGVPKISVPALMAIVGILHLMESLLIYIDGWRTPTPIFIR
LKDGRIAGGFTMQKFWPIPFAALTVVTATNMTGELIHMPDWWPVLKPEGIDPATAVFLIIPAVAALGYGDLALAQLPEEK
TKLSSKRLFLFSGTLILFAVLGIYEKVFQYIAALFAPIAHELLIIIGQREEREKPPIFVAPDTGLMVLTTAKGSPARQMG
IRPGDVILSVNGAPVNEPEDIIRVIEDRPTMLWITVKDLKGHYTSYEYRDPEGVYSLGVLVVPKTVGIVYDINEDGIILK
KLKSIFRNIFKKGE

Sequences:

>Translated_414_residues
MNTLFQVAWIVIETIALSVFSPFFWIVIILVIMQYRNKIAIEREIMGIEQEPIKELVLDSVFYGVIAATIGSFIMVFLGI
TIENIGLQYVWPLAILLMFISPRYICFSYSGGIVSLISLIFGVPKISVPALMAIVGILHLMESLLIYIDGWRTPTPIFIR
LKDGRIAGGFTMQKFWPIPFAALTVVTATNMTGELIHMPDWWPVLKPEGIDPATAVFLIIPAVAALGYGDLALAQLPEEK
TKLSSKRLFLFSGTLILFAVLGIYEKVFQYIAALFAPIAHELLIIIGQREEREKPPIFVAPDTGLMVLTTAKGSPARQMG
IRPGDVILSVNGAPVNEPEDIIRVIEDRPTMLWITVKDLKGHYTSYEYRDPEGVYSLGVLVVPKTVGIVYDINEDGIILK
KLKSIFRNIFKKGE
>Mature_414_residues
MNTLFQVAWIVIETIALSVFSPFFWIVIILVIMQYRNKIAIEREIMGIEQEPIKELVLDSVFYGVIAATIGSFIMVFLGI
TIENIGLQYVWPLAILLMFISPRYICFSYSGGIVSLISLIFGVPKISVPALMAIVGILHLMESLLIYIDGWRTPTPIFIR
LKDGRIAGGFTMQKFWPIPFAALTVVTATNMTGELIHMPDWWPVLKPEGIDPATAVFLIIPAVAALGYGDLALAQLPEEK
TKLSSKRLFLFSGTLILFAVLGIYEKVFQYIAALFAPIAHELLIIIGQREEREKPPIFVAPDTGLMVLTTAKGSPARQMG
IRPGDVILSVNGAPVNEPEDIIRVIEDRPTMLWITVKDLKGHYTSYEYRDPEGVYSLGVLVVPKTVGIVYDINEDGIILK
KLKSIFRNIFKKGE

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46176; Mature: 46176

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLFQVAWIVIETIALSVFSPFFWIVIILVIMQYRNKIAIEREIMGIEQEPIKELVLDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHH
VFYGVIAATIGSFIMVFLGITIENIGLQYVWPLAILLMFISPRYICFSYSGGIVSLISLI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
FGVPKISVPALMAIVGILHLMESLLIYIDGWRTPTPIFIRLKDGRIAGGFTMQKFWPIPF
HCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCEEECCEEHHHCCCCCH
AALTVVTATNMTGELIHMPDWWPVLKPEGIDPATAVFLIIPAVAALGYGDLALAQLPEEK
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHH
TKLSSKRLFLFSGTLILFAVLGIYEKVFQYIAALFAPIAHELLIIIGQREEREKPPIFVA
HHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEE
PDTGLMVLTTAKGSPARQMGIRPGDVILSVNGAPVNEPEDIIRVIEDRPTMLWITVKDLK
CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEECC
GHYTSYEYRDPEGVYSLGVLVVPKTVGIVYDINEDGIILKKLKSIFRNIFKKGE
CCCCCCCCCCCCCHHEEEEEEEECEEEEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTLFQVAWIVIETIALSVFSPFFWIVIILVIMQYRNKIAIEREIMGIEQEPIKELVLDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHH
VFYGVIAATIGSFIMVFLGITIENIGLQYVWPLAILLMFISPRYICFSYSGGIVSLISLI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
FGVPKISVPALMAIVGILHLMESLLIYIDGWRTPTPIFIRLKDGRIAGGFTMQKFWPIPF
HCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCEEECCEEHHHCCCCCH
AALTVVTATNMTGELIHMPDWWPVLKPEGIDPATAVFLIIPAVAALGYGDLALAQLPEEK
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHH
TKLSSKRLFLFSGTLILFAVLGIYEKVFQYIAALFAPIAHELLIIIGQREEREKPPIFVA
HHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEE
PDTGLMVLTTAKGSPARQMGIRPGDVILSVNGAPVNEPEDIIRVIEDRPTMLWITVKDLK
CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEECC
GHYTSYEYRDPEGVYSLGVLVVPKTVGIVYDINEDGIILKKLKSIFRNIFKKGE
CCCCCCCCCCCCCHHEEEEEEEECEEEEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]