Click here to switch to the map view.

The map label for this gene is FabH4 [H]

Identifier: 20808287

GI number: 20808287

Start: 1819843

End: 1821372

Strand: Reverse

Name: FabH4 [H]

Synonym: TTE1875

Alternate gene names: 20808287

Gene position: 1821372-1819843 (Counterclockwise)

Preceding gene: 20808288

Following gene: 20808286

Centisome position: 67.72

GC content: 40.2

Gene sequence:

>1530_bases
ATGAATCCAGTGATAAAAGGATGTAGTCATATTTTGGTTCATGTGCCTAACGTAATGCTGGAAGCAGGTACAACCCAAAT
ATTAGAAAGAGAAAACAAAAATTCCGATTATCTCTTAAAAATAAATGACTACATAAGGTCTTATGAAGACTGTATTTCTT
ACCCTCCAAATCAAGCTTATATAGGGAATATATATCCTGACAAACTGAATGATATTCCACGGCCATGGTATCAAAATCCA
TTGCCTCCTAAGAGATTTGGGTCATTTGGAGAGATAATGCCTGAGGATGAGTTTTACGCTTTGATGCAGATATCTGACGT
TTTTGATTTAGTGCTTTTGGAAAAAGACTTTGTAAAAGAAGTTAGAAGAAAATTAGAAGGACATCCATTGATCAGTGAGA
AAGATTTGTCAAGATTAAAAGAAGGAGTCTCTTTAGAGGAGATAGAGAGGCAGATAGAAAATAAGGCGGTACCTCTTAGA
TTTAACGGCAAAATAGTTGGATGTGTAAAGAAAGCTCATGACAAAGATATAACTCTTTCCTCCCATGTAATGTTGGAAAA
TCTGGCCACAAAGGCTTCTGCAGTATTGGCCTTTAAGCATTTGTTAAAAAATACAGGGATGAGTCCGGAAGAAATAGACT
ACATAATAGAATGTTCGGAAGAAGCCTGTGGGGACATGAATCAGAGAGGTGGCGGAAACTTTGCAAAAGCCATCGGTGAA
ATTGTAGGTTGCAGTAATGCCACAGGTGCCGATGTAAGGGGATTTTGTGCCGGACCTGCCCATGCTCTTTTGAATGCTGC
GTCGTTAGTAAAAGCAGGTGTTTTTAAAAATATAGTAGTGGTAGCTGGTGGGGCTACTGCTAAATTAGGAATGAATGGGA
GAGACCATGTTAAAAAAGGATTGCCTGTCCTTGAGGATGTGTTGGGCGGTTTTGCTGTACTAGTTTCACAAGATGATGGA
ATAAATCCAATTATTAGATTGGATAGCATTGGAAGACATACAATAGGAGCAGGCGCTTCGCCTCAGGCTGTTATGCATGC
AGTAGCAGTGGAACCTCTTGAGAGGTTGGGGCTTAAAGTGACAGATGTTGACAAATATTCAGTTGAGATGCAAAACCCAG
AGATAACAGAGCCAGCAGGTGCAGGAGATGTCCCTAAAGCTAACTACAAGATGATTGCAGCACTAGGTGTGAAGCGAGGG
GATATAGAAAAGAGTCAAATAGATGAATTCATACTAAAACACGGCATGCCTGGTTTTGCTCCCACTCAAGGGCACATTCC
TTCAGGTGTTCCTGTATTGGGGCATATAAGAGAAAAAATACTAAAGGGAGAAATTAAAAGAGCTATGATAATAGGGAAAG
GTAGCCTCTTTCTGGCGCGCATGACAAATCTGTTTGATGGGATTTCAATGATTATAGAGGCAAATCCGGGGGTAAAAGAA
GAAAAGGGAGTTGAAGAAAAAGAGATAAGGAAAATGATAGCTAAAGCCCTGAGGGACCTTGCAGAGCATCTCATTGGTAG
TGAGGTGTAA

Upstream 100 bases:

>100_bases
AGCTTTAGAAACAGATATAGAAGGGCAAACTGTTTTTGAATAAAATTTTATGCAGCTCTTTTTAAAAGAGCTGCAATTTC
ATGTGAAAGGAGTGGCGCTG

Downstream 100 bases:

>100_bases
AAAATGAACAAGAAAGTGATTGCAGAGATTTTTAATCAAATGGCGGATTTTGTTGAGAAGGGGGAATACAGCAAGAAAAT
AAGAGTAGGAATAACTACCT

Product: 3-oxoacyl-(acyl-carrier-protein) synthase III

Products: NA

Alternate protein names: Protein PC beta [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MNPVIKGCSHILVHVPNVMLEAGTTQILERENKNSDYLLKINDYIRSYEDCISYPPNQAYIGNIYPDKLNDIPRPWYQNP
LPPKRFGSFGEIMPEDEFYALMQISDVFDLVLLEKDFVKEVRRKLEGHPLISEKDLSRLKEGVSLEEIERQIENKAVPLR
FNGKIVGCVKKAHDKDITLSSHVMLENLATKASAVLAFKHLLKNTGMSPEEIDYIIECSEEACGDMNQRGGGNFAKAIGE
IVGCSNATGADVRGFCAGPAHALLNAASLVKAGVFKNIVVVAGGATAKLGMNGRDHVKKGLPVLEDVLGGFAVLVSQDDG
INPIIRLDSIGRHTIGAGASPQAVMHAVAVEPLERLGLKVTDVDKYSVEMQNPEITEPAGAGDVPKANYKMIAALGVKRG
DIEKSQIDEFILKHGMPGFAPTQGHIPSGVPVLGHIREKILKGEIKRAMIIGKGSLFLARMTNLFDGISMIIEANPGVKE
EKGVEEKEIRKMIAKALRDLAEHLIGSEV

Sequences:

>Translated_509_residues
MNPVIKGCSHILVHVPNVMLEAGTTQILERENKNSDYLLKINDYIRSYEDCISYPPNQAYIGNIYPDKLNDIPRPWYQNP
LPPKRFGSFGEIMPEDEFYALMQISDVFDLVLLEKDFVKEVRRKLEGHPLISEKDLSRLKEGVSLEEIERQIENKAVPLR
FNGKIVGCVKKAHDKDITLSSHVMLENLATKASAVLAFKHLLKNTGMSPEEIDYIIECSEEACGDMNQRGGGNFAKAIGE
IVGCSNATGADVRGFCAGPAHALLNAASLVKAGVFKNIVVVAGGATAKLGMNGRDHVKKGLPVLEDVLGGFAVLVSQDDG
INPIIRLDSIGRHTIGAGASPQAVMHAVAVEPLERLGLKVTDVDKYSVEMQNPEITEPAGAGDVPKANYKMIAALGVKRG
DIEKSQIDEFILKHGMPGFAPTQGHIPSGVPVLGHIREKILKGEIKRAMIIGKGSLFLARMTNLFDGISMIIEANPGVKE
EKGVEEKEIRKMIAKALRDLAEHLIGSEV
>Mature_509_residues
MNPVIKGCSHILVHVPNVMLEAGTTQILERENKNSDYLLKINDYIRSYEDCISYPPNQAYIGNIYPDKLNDIPRPWYQNP
LPPKRFGSFGEIMPEDEFYALMQISDVFDLVLLEKDFVKEVRRKLEGHPLISEKDLSRLKEGVSLEEIERQIENKAVPLR
FNGKIVGCVKKAHDKDITLSSHVMLENLATKASAVLAFKHLLKNTGMSPEEIDYIIECSEEACGDMNQRGGGNFAKAIGE
IVGCSNATGADVRGFCAGPAHALLNAASLVKAGVFKNIVVVAGGATAKLGMNGRDHVKKGLPVLEDVLGGFAVLVSQDDG
INPIIRLDSIGRHTIGAGASPQAVMHAVAVEPLERLGLKVTDVDKYSVEMQNPEITEPAGAGDVPKANYKMIAALGVKRG
DIEKSQIDEFILKHGMPGFAPTQGHIPSGVPVLGHIREKILKGEIKRAMIIGKGSLFLARMTNLFDGISMIIEANPGVKE
EKGVEEKEIRKMIAKALRDLAEHLIGSEV

Specific function: In the first step of glycine, betaine and sarcosine reductases, the substrate is bound to component PB via a Schiff base intermediate. Then the PB-activated substrate is nucleophilically attacked by the selenol anion of component PA to transform it to a c

COG id: COG0332

COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013751
- InterPro:   IPR017236
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF08545 ACP_syn_III [H]

EC number: =1.21.4.2; =1.21.4.3; =1.21.4.4 [H]

Molecular weight: Translated: 55507; Mature: 55507

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVIKGCSHILVHVPNVMLEAGTTQILERENKNSDYLLKINDYIRSYEDCISYPPNQAY
CCHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCE
IGNIYPDKLNDIPRPWYQNPLPPKRFGSFGEIMPEDEFYALMQISDVFDLVLLEKDFVKE
ECCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRRKLEGHPLISEKDLSRLKEGVSLEEIERQIENKAVPLRFNGKIVGCVKKAHDKDITLS
HHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCEEEEEEHHCCCCCCEEH
SHVMLENLATKASAVLAFKHLLKNTGMSPEEIDYIIECSEEACGDMNQRGGGNFAKAIGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHCCCCCCCCCCHHHHHHHH
IVGCSNATGADVRGFCAGPAHALLNAASLVKAGVFKNIVVVAGGATAKLGMNGRDHVKKG
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCCHHHHHHC
LPVLEDVLGGFAVLVSQDDGINPIIRLDSIGRHTIGAGASPQAVMHAVAVEPLERLGLKV
CHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEE
TDVDKYSVEMQNPEITEPAGAGDVPKANYKMIAALGVKRGDIEKSQIDEFILKHGMPGFA
EECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC
PTQGHIPSGVPVLGHIREKILKGEIKRAMIIGKGSLFLARMTNLFDGISMIIEANPGVKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHEEEEECCCCCCH
EKGVEEKEIRKMIAKALRDLAEHLIGSEV
HCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPVIKGCSHILVHVPNVMLEAGTTQILERENKNSDYLLKINDYIRSYEDCISYPPNQAY
CCHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCE
IGNIYPDKLNDIPRPWYQNPLPPKRFGSFGEIMPEDEFYALMQISDVFDLVLLEKDFVKE
ECCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRRKLEGHPLISEKDLSRLKEGVSLEEIERQIENKAVPLRFNGKIVGCVKKAHDKDITLS
HHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCEEEEEEHHCCCCCCEEH
SHVMLENLATKASAVLAFKHLLKNTGMSPEEIDYIIECSEEACGDMNQRGGGNFAKAIGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHCCCCCCCCCCHHHHHHHH
IVGCSNATGADVRGFCAGPAHALLNAASLVKAGVFKNIVVVAGGATAKLGMNGRDHVKKG
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCCHHHHHHC
LPVLEDVLGGFAVLVSQDDGINPIIRLDSIGRHTIGAGASPQAVMHAVAVEPLERLGLKV
CHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEE
TDVDKYSVEMQNPEITEPAGAGDVPKANYKMIAALGVKRGDIEKSQIDEFILKHGMPGFA
EECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC
PTQGHIPSGVPVLGHIREKILKGEIKRAMIIGKGSLFLARMTNLFDGISMIIEANPGVKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHEEEEECCCCCCH
EKGVEEKEIRKMIAKALRDLAEHLIGSEV
HCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8223622; 1587286 [H]