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The map label for this gene is 20808261

Identifier: 20808261

GI number: 20808261

Start: 1793785

End: 1794141

Strand: Reverse

Name: 20808261

Synonym: TTE1845

Alternate gene names: NA

Gene position: 1794141-1793785 (Counterclockwise)

Preceding gene: 20808262

Following gene: 20808260

Centisome position: 66.71

GC content: 43.7

Gene sequence:

>357_bases
ATGCCAAGACCGCCGAAGTGGAGATGGGTTAGAAGCGAACCAAATGTTACTTATTTTAAACCAGTAGGGATTCCGCTTTC
TATGCTGGAAGAAGTGATACTCACAGTAGAAGAACTGGAGGCTATCAGGCTGAAGGATTTAGAAGGGTTGGAACAGGAAG
AATGTGCCGATATGATGAAGGTATCTCGGCCAACTTTTTTTAGAATAATAACTTCTGCTAGGCAGAAGATAGCTGATGCA
TTGGTAAATGGCAAGGCTATAAGGGTAGAAGGAGGAAATTACAAAGTATACGGGGAGGATATGAGGGGTCACGGTGGAAT
GAGGCACAGGCATGGCTGGTATAACGAAGAAGATTAA

Upstream 100 bases:

>100_bases
TCTTGACACTATCGGATTTCATGAGGGATTGATATTTTTTCGCAGAAAGTATAAAATATTAAAGTAATTGCAATTTATAA
AAATAGTAGGGTGTGATAAA

Downstream 100 bases:

>100_bases
ATTTTGATTAAAATTTCTCGTATTTTCACACAACCTTTCATATATATAGTATAATTGAAAAGGACTATATATATGGAAGG
ATGAAGTTAATGGACATCGT

Product: DNA-binding proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPRPPKWRWVRSEPNVTYFKPVGIPLSMLEEVILTVEELEAIRLKDLEGLEQEECADMMKVSRPTFFRIITSARQKIADA
LVNGKAIRVEGGNYKVYGEDMRGHGGMRHRHGWYNEED

Sequences:

>Translated_118_residues
MPRPPKWRWVRSEPNVTYFKPVGIPLSMLEEVILTVEELEAIRLKDLEGLEQEECADMMKVSRPTFFRIITSARQKIADA
LVNGKAIRVEGGNYKVYGEDMRGHGGMRHRHGWYNEED
>Mature_117_residues
PRPPKWRWVRSEPNVTYFKPVGIPLSMLEEVILTVEELEAIRLKDLEGLEQEECADMMKVSRPTFFRIITSARQKIADAL
VNGKAIRVEGGNYKVYGEDMRGHGGMRHRHGWYNEED

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1845_THETN (Q8R8Y7)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623432.1
- GeneID:   997041
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1845
- NMPDR:   fig|273068.3.peg.1605
- HOGENOM:   HBG513201
- OMA:   GRPKIPR
- ProtClustDB:   CLSK901446
- BioCyc:   TTEN273068:TTE1845-MONOMER
- HAMAP:   MF_00674
- InterPro:   IPR002852

Pfam domain/function: PF02001 DUF134

EC number: NA

Molecular weight: Translated: 13703; Mature: 13572

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPPKWRWVRSEPNVTYFKPVGIPLSMLEEVILTVEELEAIRLKDLEGLEQEECADMMK
CCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VSRPTFFRIITSARQKIADALVNGKAIRVEGGNYKVYGEDMRGHGGMRHRHGWYNEED
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRPPKWRWVRSEPNVTYFKPVGIPLSMLEEVILTVEELEAIRLKDLEGLEQEECADMMK
CCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VSRPTFFRIITSARQKIADALVNGKAIRVEGGNYKVYGEDMRGHGGMRHRHGWYNEED
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336