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The map label for this gene is DedA2 [H]

Identifier: 20808260

GI number: 20808260

Start: 1793066

End: 1793695

Strand: Reverse

Name: DedA2 [H]

Synonym: TTE1844

Alternate gene names: 20808260

Gene position: 1793695-1793066 (Counterclockwise)

Preceding gene: 20808261

Following gene: 20808259

Centisome position: 66.69

GC content: 36.35

Gene sequence:

>630_bases
ATGGACATCGTAAAAAATTTTGTAGATATTGTACTTCACTTGGATAAATATCTTGGAACGATAATTCAAACTTATGGCAC
ATGGACCTATAGCCTTTTGTTTTTTATCATTTTTCTTGAGACGGGTTTTGTAGTGACCCCTTTTCTCCCAGGTGATTCGC
TTTTATTTGCTGCAGGGACCTTTGCTGCGATAGGGAGTCTGAACGTGTACTATGTGATTGTGCTTTTAGCTTCTGCTGCA
ATATTGGGAGATACGGTTAATTACCATATAGGTAAGTTTATAGGTGAAAAAATTTATGAGAGTGAAAATTTGAGATGGAT
AAAAAAAGAGCATTTACTGGAAGCTCGTGATTTTTATGAGAAGTACGGCGCTATTACTATTGTGGTAGGAAGGTTTATCC
CTATCATCAGAACCTTTGTCCCTTTTGTTGCAGGAATTGGCCAGATGAGATGTTTTAGGTTTTTGTTTTACAACGCATTT
GGCGGAATTCTCTGGGTTTCTCTTTTTACTTTGGGAGGATACTTTTTTGGAAATTTGAAAATAGTCAAGGACCATTTTGG
GTTGGTTACTATTGCTATAATTGTGATTTCAGTGATACCTGCAATTGCCACTTTTCTTAAAAGAAGATGA

Upstream 100 bases:

>100_bases
AAGAAGATTAAATTTTGATTAAAATTTCTCGTATTTTCACACAACCTTTCATATATATAGTATAATTGAAAAGGACTATA
TATATGGAAGGATGAAGTTA

Downstream 100 bases:

>100_bases
GCTGGGGTTTTGCCCTAGCTCATCTCAGACTGATGACAAACTCAGAGAAGTGGCATTTTGTATGTAAATGCGACTTGTTA
CAAAGCGGTAACAAAACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDIVKNFVDIVLHLDKYLGTIIQTYGTWTYSLLFFIIFLETGFVVTPFLPGDSLLFAAGTFAAIGSLNVYYVIVLLASAA
ILGDTVNYHIGKFIGEKIYESENLRWIKKEHLLEARDFYEKYGAITIVVGRFIPIIRTFVPFVAGIGQMRCFRFLFYNAF
GGILWVSLFTLGGYFFGNLKIVKDHFGLVTIAIIVISVIPAIATFLKRR

Sequences:

>Translated_209_residues
MDIVKNFVDIVLHLDKYLGTIIQTYGTWTYSLLFFIIFLETGFVVTPFLPGDSLLFAAGTFAAIGSLNVYYVIVLLASAA
ILGDTVNYHIGKFIGEKIYESENLRWIKKEHLLEARDFYEKYGAITIVVGRFIPIIRTFVPFVAGIGQMRCFRFLFYNAF
GGILWVSLFTLGGYFFGNLKIVKDHFGLVTIAIIVISVIPAIATFLKRR
>Mature_209_residues
MDIVKNFVDIVLHLDKYLGTIIQTYGTWTYSLLFFIIFLETGFVVTPFLPGDSLLFAAGTFAAIGSLNVYYVIVLLASAA
ILGDTVNYHIGKFIGEKIYESENLRWIKKEHLLEARDFYEKYGAITIVVGRFIPIIRTFVPFVAGIGQMRCFRFLFYNAF
GGILWVSLFTLGGYFFGNLKIVKDHFGLVTIAIIVISVIPAIATFLKRR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=46.6666666666667, Blast_Score=213, Evalue=8e-57,
Organism=Escherichia coli, GI1789481, Length=152, Percent_Identity=36.1842105263158, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=32.5443786982249, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23636; Mature: 23636

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVKNFVDIVLHLDKYLGTIIQTYGTWTYSLLFFIIFLETGFVVTPFLPGDSLLFAAGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
FAAIGSLNVYYVIVLLASAAILGDTVNYHIGKFIGEKIYESENLRWIKKEHLLEARDFYE
HHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KYGAITIVVGRFIPIIRTFVPFVAGIGQMRCFRFLFYNAFGGILWVSLFTLGGYFFGNLK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
IVKDHFGLVTIAIIVISVIPAIATFLKRR
EEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIVKNFVDIVLHLDKYLGTIIQTYGTWTYSLLFFIIFLETGFVVTPFLPGDSLLFAAGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
FAAIGSLNVYYVIVLLASAAILGDTVNYHIGKFIGEKIYESENLRWIKKEHLLEARDFYE
HHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KYGAITIVVGRFIPIIRTFVPFVAGIGQMRCFRFLFYNAFGGILWVSLFTLGGYFFGNLK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
IVKDHFGLVTIAIIVISVIPAIATFLKRR
EEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]