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The map label for this gene is ybhK [C]

Identifier: 20808249

GI number: 20808249

Start: 1783737

End: 1784693

Strand: Reverse

Name: ybhK [C]

Synonym: TTE1833

Alternate gene names: 20808249

Gene position: 1784693-1783737 (Counterclockwise)

Preceding gene: 20808250

Following gene: 20808248

Centisome position: 66.36

GC content: 40.02

Gene sequence:

>957_bases
ATGCGAAAACAGCCTCGCATTGTGGCGATTGGTGGAGGTACAGGGCTCTCTACTATGTTAAGAGGGCTCAAGCTTTTCAC
AACAAATATAACTGCTGTAGTGACAGTGGCAGATGATGGAGGAGGGTCGGGAATTTTGAGAGAAGACTTAGGTATACTTC
CTCCTGGAGATATACGAAATTGCATATTGGCTTTGGCAAACACAGAGCCTACAATGGAACAGCTTCTCCAGTACAGATTT
ACAGAGGGGATGTTAAAGGGGCAGAGTTTTGGAAATTTGTTTTTGGCTGCAATGATAGGAATTTCTAACAGTTTTGAAGA
GGCTGTCAAGAGGATGAGTGAAGTATTAGCTGTGTCAGGAAAGGTTTTGCCTGTTACAGTGGAAGATGTGAGACTTGTCG
CTGAGCTGGAAAATGGTACTATTATAAGAGGAGAGTCCAAAATACCTGAGATACAGCAAAAAGAAAACAGCAGAATAAAG
AGAATATATTTGGAACCTTCTCCTGCTGCTCCTTTTGAAGAAGTTTTAGTGGATATATTGAATGCCGAGGCGATAGTGTT
AGGGCCGGGGAGTTTGTATACAAGTGTTATTCCGAACCTTTTGGTAGATGGAATTTGTGATGCTATTGAAACATCTAAAG
CCATAAAAATATATGTATGTAATATAATGACACAGCCGGGTGAGACTTTGGGGTATACTGCTACTGACCATATAAAGGCT
CTTTTTGACCATGGGCTTAAGTCTTTGGACTATGTGATTGTGAACAAAGGTGAAATCCCTGAGGAGTACAGGCAGCGCTA
TATAAGAGATTTATCTGAGCCCGTGAAATATGACAAAGAGGAGATAGAAAAAATGGGTATAAAAGTTGTTGAAGAAGACT
TGGTAACTATAAAGCAGGAATATATAAGGCATGATGAGCAAAAGCTTGCAGAGATTATTGTAGATTTGATAAGTTAA

Upstream 100 bases:

>100_bases
CAGGTCTGTTGCGATTGCCAATGCCCTTTATGACCTTTTAAAAAAAGAGGATTATTCTGTTGTGGTGAATCACAGAGACA
TTGGAGAGGAGTAGATATTT

Downstream 100 bases:

>100_bases
GTTTAATTTTTAGTCCATCTTGTACAAAAAAATCTATTGACATTCGTCTAAATAAGATATACAATATTATTGAAACGATA
GCGCAAGCGATTGCAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRKQPRIVAIGGGTGLSTMLRGLKLFTTNITAVVTVADDGGGSGILREDLGILPPGDIRNCILALANTEPTMEQLLQYRF
TEGMLKGQSFGNLFLAAMIGISNSFEEAVKRMSEVLAVSGKVLPVTVEDVRLVAELENGTIIRGESKIPEIQQKENSRIK
RIYLEPSPAAPFEEVLVDILNAEAIVLGPGSLYTSVIPNLLVDGICDAIETSKAIKIYVCNIMTQPGETLGYTATDHIKA
LFDHGLKSLDYVIVNKGEIPEEYRQRYIRDLSEPVKYDKEEIEKMGIKVVEEDLVTIKQEYIRHDEQKLAEIIVDLIS

Sequences:

>Translated_318_residues
MRKQPRIVAIGGGTGLSTMLRGLKLFTTNITAVVTVADDGGGSGILREDLGILPPGDIRNCILALANTEPTMEQLLQYRF
TEGMLKGQSFGNLFLAAMIGISNSFEEAVKRMSEVLAVSGKVLPVTVEDVRLVAELENGTIIRGESKIPEIQQKENSRIK
RIYLEPSPAAPFEEVLVDILNAEAIVLGPGSLYTSVIPNLLVDGICDAIETSKAIKIYVCNIMTQPGETLGYTATDHIKA
LFDHGLKSLDYVIVNKGEIPEEYRQRYIRDLSEPVKYDKEEIEKMGIKVVEEDLVTIKQEYIRHDEQKLAEIIVDLIS
>Mature_318_residues
MRKQPRIVAIGGGTGLSTMLRGLKLFTTNITAVVTVADDGGGSGILREDLGILPPGDIRNCILALANTEPTMEQLLQYRF
TEGMLKGQSFGNLFLAAMIGISNSFEEAVKRMSEVLAVSGKVLPVTVEDVRLVAELENGTIIRGESKIPEIQQKENSRIK
RIYLEPSPAAPFEEVLVDILNAEAIVLGPGSLYTSVIPNLLVDGICDAIETSKAIKIYVCNIMTQPGETLGYTATDHIKA
LFDHGLKSLDYVIVNKGEIPEEYRQRYIRDLSEPVKYDKEEIEKMGIKVVEEDLVTIKQEYIRHDEQKLAEIIVDLIS

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=219, Percent_Identity=34.703196347032, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 35076; Mature: 35076

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQPRIVAIGGGTGLSTMLRGLKLFTTNITAVVTVADDGGGSGILREDLGILPPGDIRN
CCCCCCEEEEECCCCHHHHHHHHHHEEECEEEEEEEECCCCCCCCHHHCCCCCCCCHHHH
CILALANTEPTMEQLLQYRFTEGMLKGQSFGNLFLAAMIGISNSFEEAVKRMSEVLAVSG
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
KVLPVTVEDVRLVAELENGTIIRGESKIPEIQQKENSRIKRIYLEPSPAAPFEEVLVDIL
CEEEEEHHHHHEEEEECCCEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
NAEAIVLGPGSLYTSVIPNLLVDGICDAIETSKAIKIYVCNIMTQPGETLGYTATDHIKA
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHH
LFDHGLKSLDYVIVNKGEIPEEYRQRYIRDLSEPVKYDKEEIEKMGIKVVEEDLVTIKQE
HHHHCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHH
YIRHDEQKLAEIIVDLIS
HHHCHHHHHHHHHHHHHC
>Mature Secondary Structure
MRKQPRIVAIGGGTGLSTMLRGLKLFTTNITAVVTVADDGGGSGILREDLGILPPGDIRN
CCCCCCEEEEECCCCHHHHHHHHHHEEECEEEEEEEECCCCCCCCHHHCCCCCCCCHHHH
CILALANTEPTMEQLLQYRFTEGMLKGQSFGNLFLAAMIGISNSFEEAVKRMSEVLAVSG
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
KVLPVTVEDVRLVAELENGTIIRGESKIPEIQQKENSRIKRIYLEPSPAAPFEEVLVDIL
CEEEEEHHHHHEEEEECCCEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
NAEAIVLGPGSLYTSVIPNLLVDGICDAIETSKAIKIYVCNIMTQPGETLGYTATDHIKA
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHH
LFDHGLKSLDYVIVNKGEIPEEYRQRYIRDLSEPVKYDKEEIEKMGIKVVEEDLVTIKQE
HHHHCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHH
YIRHDEQKLAEIIVDLIS
HHHCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195085 [H]