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The map label for this gene is yhbA [H]

Identifier: 20808189

GI number: 20808189

Start: 1716971

End: 1718092

Strand: Reverse

Name: yhbA [H]

Synonym: TTE1770

Alternate gene names: 20808189

Gene position: 1718092-1716971 (Counterclockwise)

Preceding gene: 20808190

Following gene: 20808188

Centisome position: 63.88

GC content: 36.1

Gene sequence:

>1122_bases
GTGAGCTGTATAAGCAAAAAGGAAATAACAGACTTTGCTAAAGCAGTTGGCATTGACTTGATCGGTTTTGCTTCTGCCGA
TTGCCTTAAAGGATATAAAAGCTTTTTAGAAGAAAGAAAAAGTCTAGGTTATGAATGCCCTATTGAGGAGAGAATGCCGG
ATAAGAGGGTCTCTCCTGAATTTATTTTGCCAGAAGTTAAAACCATAATTTCTGTAGCTTTGTCCTACAATATAGAATAC
CAAGTAAAACTTCCTAGTAAAAGCTTTGGCATAATCTCAAAAAGCAGCTGGGGAATGGATTATCATTTGGTTTTAAAAGA
AAAGATGAAAAGAGTGTGTGAGTTTGTAAAATCAAAATGTCCTGATGTAAAGACGGTTTCTCTGGTGGACAACAATCCTC
TTTTGGAAAGGGCAATAGCCTATCACGCAGGGATAGGGTGGTTTGGTAAAAATGGGCTTATAATAAACGAAGAATACGGT
TCATACCTTTTCTTAGGAGAAATTTTAATAAACGAATATTTTGAGCCTGATACTCCTCAGGAGTCAAAGTGTGGCGATTG
CGATTTGTGTATGAAAGCTTGTCCTACAAAAGCTATAGAAAAGCCGTATATAGTTAATGCAAATAAGTGTCTTTCCTTTA
TAACAGTCAAAAAAGGAGAAATAGAAGAGGAATTTTTAAAAAAATTAGGAAGGAGAATATACGGATGCGATACCTGTCAG
GAAGTCTGCCCTTTTAATAAGGAAGCCAAAAAAGTGAAAAGAGAAGAATTTACGCCTTCCAAACTTTTGCCTAGGCCTAA
CTTGATCGAGATTTTAAATATGTCAAATAAAGAGTTTAAGGAAATTTTTGGACCTACAGCTTCTTCTTGGAGAGGGAAAA
GTGTTATAATAAGAAATGCAATAATTGCCTGTGTGAATACGAAAGACCAAGAGTGCATAGAGCCTATCAAGAAGCTTCTA
AAGTCTCCGAGCCCTCTTTTGAGGGGATATAGTGCCTGGGCTATATCTTACTTGGAAGAAAGAGATAAAGCTATAGAGGA
AATAAAAGAAGCTTTGAATAAAGAAAAAGATGGTTTTGCAATAAAGATGATGGCAGAAGCCTTACAAAAACTAGAAAGGT
GA

Upstream 100 bases:

>100_bases
CTGGCAGAAGTTTTGAGGAGATTTATGAAAGAGCTTATAATAAACTGAAGTACTATTACGAACTTTTGACAAACAAAAAA
GAGGACAAAGGGGAGAAAAA

Downstream 100 bases:

>100_bases
GGAAAGTGCGCATATCTAAAGAAGAAGCCCTGAAAGTCATAGAGATTTTGAAAAAAATCTATCCAAATGCAAAATCTGGT
CTTAAGTTTAATAATCCTTT

Product: uncharacterized Fe-S protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSCISKKEITDFAKAVGIDLIGFASADCLKGYKSFLEERKSLGYECPIEERMPDKRVSPEFILPEVKTIISVALSYNIEY
QVKLPSKSFGIISKSSWGMDYHLVLKEKMKRVCEFVKSKCPDVKTVSLVDNNPLLERAIAYHAGIGWFGKNGLIINEEYG
SYLFLGEILINEYFEPDTPQESKCGDCDLCMKACPTKAIEKPYIVNANKCLSFITVKKGEIEEEFLKKLGRRIYGCDTCQ
EVCPFNKEAKKVKREEFTPSKLLPRPNLIEILNMSNKEFKEIFGPTASSWRGKSVIIRNAIIACVNTKDQECIEPIKKLL
KSPSPLLRGYSAWAISYLEERDKAIEEIKEALNKEKDGFAIKMMAEALQKLER

Sequences:

>Translated_373_residues
MSCISKKEITDFAKAVGIDLIGFASADCLKGYKSFLEERKSLGYECPIEERMPDKRVSPEFILPEVKTIISVALSYNIEY
QVKLPSKSFGIISKSSWGMDYHLVLKEKMKRVCEFVKSKCPDVKTVSLVDNNPLLERAIAYHAGIGWFGKNGLIINEEYG
SYLFLGEILINEYFEPDTPQESKCGDCDLCMKACPTKAIEKPYIVNANKCLSFITVKKGEIEEEFLKKLGRRIYGCDTCQ
EVCPFNKEAKKVKREEFTPSKLLPRPNLIEILNMSNKEFKEIFGPTASSWRGKSVIIRNAIIACVNTKDQECIEPIKKLL
KSPSPLLRGYSAWAISYLEERDKAIEEIKEALNKEKDGFAIKMMAEALQKLER
>Mature_372_residues
SCISKKEITDFAKAVGIDLIGFASADCLKGYKSFLEERKSLGYECPIEERMPDKRVSPEFILPEVKTIISVALSYNIEYQ
VKLPSKSFGIISKSSWGMDYHLVLKEKMKRVCEFVKSKCPDVKTVSLVDNNPLLERAIAYHAGIGWFGKNGLIINEEYGS
YLFLGEILINEYFEPDTPQESKCGDCDLCMKACPTKAIEKPYIVNANKCLSFITVKKGEIEEEFLKKLGRRIYGCDTCQE
VCPFNKEAKKVKREEFTPSKLLPRPNLIEILNMSNKEFKEIFGPTASSWRGKSVIIRNAIIACVNTKDQECIEPIKKLLK
SPSPLLRGYSAWAISYLEERDKAIEEIKEALNKEKDGFAIKMMAEALQKLER

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=299, Percent_Identity=37.123745819398, Blast_Score=211, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42372; Mature: 42241

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCISKKEITDFAKAVGIDLIGFASADCLKGYKSFLEERKSLGYECPIEERMPDKRVSPE
CCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
FILPEVKTIISVALSYNIEYQVKLPSKSFGIISKSSWGMDYHLVLKEKMKRVCEFVKSKC
HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHC
PDVKTVSLVDNNPLLERAIAYHAGIGWFGKNGLIINEEYGSYLFLGEILINEYFEPDTPQ
CCCEEEEEECCCHHHHHHHHHHCCCCEECCCCEEEECCCCCEEHHHHHHHHHCCCCCCCC
ESKCGDCDLCMKACPTKAIEKPYIVNANKCLSFITVKKGEIEEEFLKKLGRRIYGCDTCQ
CCCCCCHHHHHHHCCHHHCCCCEEEEHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCHHH
EVCPFNKEAKKVKREEFTPSKLLPRPNLIEILNMSNKEFKEIFGPTASSWRGKSVIIRNA
HHCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCEEEHHHH
IIACVNTKDQECIEPIKKLLKSPSPLLRGYSAWAISYLEERDKAIEEIKEALNKEKDGFA
HHEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IKMMAEALQKLER
HHHHHHHHHHHCC
>Mature Secondary Structure 
SCISKKEITDFAKAVGIDLIGFASADCLKGYKSFLEERKSLGYECPIEERMPDKRVSPE
CCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
FILPEVKTIISVALSYNIEYQVKLPSKSFGIISKSSWGMDYHLVLKEKMKRVCEFVKSKC
HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHC
PDVKTVSLVDNNPLLERAIAYHAGIGWFGKNGLIINEEYGSYLFLGEILINEYFEPDTPQ
CCCEEEEEECCCHHHHHHHHHHCCCCEECCCCEEEECCCCCEEHHHHHHHHHCCCCCCCC
ESKCGDCDLCMKACPTKAIEKPYIVNANKCLSFITVKKGEIEEEFLKKLGRRIYGCDTCQ
CCCCCCHHHHHHHCCHHHCCCCEEEEHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCHHH
EVCPFNKEAKKVKREEFTPSKLLPRPNLIEILNMSNKEFKEIFGPTASSWRGKSVIIRNA
HHCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCEEEHHHH
IIACVNTKDQECIEPIKKLLKSPSPLLRGYSAWAISYLEERDKAIEEIKEALNKEKDGFA
HHEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IKMMAEALQKLER
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]