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The map label for this gene is DeoR2 [H]

Identifier: 20808182

GI number: 20808182

Start: 1710392

End: 1711414

Strand: Reverse

Name: DeoR2 [H]

Synonym: TTE1763

Alternate gene names: 20808182

Gene position: 1711414-1710392 (Counterclockwise)

Preceding gene: 20808183

Following gene: 20808181

Centisome position: 63.63

GC content: 39.78

Gene sequence:

>1023_bases
ATGAAGGATATAATAGCCTTGCAACAGAAAATAGTACCAGAGCTTATAGAACTTCTCCAAAAAAGGTATGCTATAATGAG
AAACATCTACTTTAACCAGCCCATAGGTCGTCGAGCTCTTTCTCACCAGTTAAACATAGGAGAAAGGATAATACGCACAG
AGGTTTCTTTTCTGAAGTCCCAGGGCCTCATAGATATAAATCCAATGGGCATGACAGTCACTAAAGAAGGCGAAGAATTG
ATTGAGAGCTTGAAAGATTTTATACATGAACTCAAGGGACTTGATAACATAGAGAAAGTCCTTGAGGAAAAATTAAAAGT
GGAAAAAGTTATAGTGGTGCCTGGAAATACAGAAGAAGACCCGATGACAAAAAAAGAGCTTGGCAAATCTGCCGCCAATT
ACCTTAGAGAAATAATAAGGTATGACAGTGTCATAGCTTTAACAGGCGGATCTACTGTGCTGGAAGTTGCAAATGGCATG
CCTCAATTGTACGCCCAATCAGAGATAGTAGTAGTTCCTGCTCGTGGAGGTCTAGGGAGGGAAGTAGAAAAACAGGCTAA
CACGATTGCCTCCATACTCGCTAAAAAACTTGGCGGTACATATAAGATGTTGTATGTTCCTGACCATTTAAGCAAAGAAG
CAGTAGAAAGCCTTATGAAAGAGCCTGATATAAAAGAAGTAGTTGATATACTCAAAAAAGCGGACATCCTCATCTTTGGA
ATAGGTAGAGCTGATGTGATGGCTGACAGGAGAAATCTTCCACAGTCTATAAAGGATTTTTTAAAGGAGAAAGGTGCTGT
GGCAGAAAGCCTGGGATATTACTTTGATAAAGAGGGAAAAATAGTATACGCAACACCTAGTATTTTCCTTACCATTGATG
ATTTGAAGTCAGTAAAGCATTTGATAGGAGTTTCTGGTGGGAAGAGCAAGGCAGAAGCTATTCTAGCCACCTGCAGAAGT
GGAAATGTTAAGGTGCTCGTGACTGATGAAGGAGCTGCTTTTGAAATTTTAAGAATGGTGTAA

Upstream 100 bases:

>100_bases
GTTTGAAATTAGTATAAAATAGTTGGTGTAGGTTATTTTTATAAAAGGTGGGACATTTAAAGAATAACGGGACGGGAAGT
GTCCTGAAGAGGGAAATGAC

Downstream 100 bases:

>100_bases
AAACACCTTATAAGGTGTTTAACAAAAAAACTAACAAGGAGGAGTACATAATGGGTGTTAGAGTAGGAATTAACGGTTTT
GGAAGAATAGGAAGGAATGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKDIIALQQKIVPELIELLQKRYAIMRNIYFNQPIGRRALSHQLNIGERIIRTEVSFLKSQGLIDINPMGMTVTKEGEEL
IESLKDFIHELKGLDNIEKVLEEKLKVEKVIVVPGNTEEDPMTKKELGKSAANYLREIIRYDSVIALTGGSTVLEVANGM
PQLYAQSEIVVVPARGGLGREVEKQANTIASILAKKLGGTYKMLYVPDHLSKEAVESLMKEPDIKEVVDILKKADILIFG
IGRADVMADRRNLPQSIKDFLKEKGAVAESLGYYFDKEGKIVYATPSIFLTIDDLKSVKHLIGVSGGKSKAEAILATCRS
GNVKVLVTDEGAAFEILRMV

Sequences:

>Translated_340_residues
MKDIIALQQKIVPELIELLQKRYAIMRNIYFNQPIGRRALSHQLNIGERIIRTEVSFLKSQGLIDINPMGMTVTKEGEEL
IESLKDFIHELKGLDNIEKVLEEKLKVEKVIVVPGNTEEDPMTKKELGKSAANYLREIIRYDSVIALTGGSTVLEVANGM
PQLYAQSEIVVVPARGGLGREVEKQANTIASILAKKLGGTYKMLYVPDHLSKEAVESLMKEPDIKEVVDILKKADILIFG
IGRADVMADRRNLPQSIKDFLKEKGAVAESLGYYFDKEGKIVYATPSIFLTIDDLKSVKHLIGVSGGKSKAEAILATCRS
GNVKVLVTDEGAAFEILRMV
>Mature_340_residues
MKDIIALQQKIVPELIELLQKRYAIMRNIYFNQPIGRRALSHQLNIGERIIRTEVSFLKSQGLIDINPMGMTVTKEGEEL
IESLKDFIHELKGLDNIEKVLEEKLKVEKVIVVPGNTEEDPMTKKELGKSAANYLREIIRYDSVIALTGGSTVLEVANGM
PQLYAQSEIVVVPARGGLGREVEKQANTIASILAKKLGGTYKMLYVPDHLSKEAVESLMKEPDIKEVVDILKKADILIFG
IGRADVMADRRNLPQSIKDFLKEKGAVAESLGYYFDKEGKIVYATPSIFLTIDDLKSVKHLIGVSGGKSKAEAILATCRS
GNVKVLVTDEGAAFEILRMV

Specific function: Represses the transcription of the gapA gene [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=260, Percent_Identity=27.3076923076923, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082414, Length=249, Percent_Identity=24.0963855421687, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37696; Mature: 37696

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIIALQQKIVPELIELLQKRYAIMRNIYFNQPIGRRALSHQLNIGERIIRTEVSFLKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLIDINPMGMTVTKEGEELIESLKDFIHELKGLDNIEKVLEEKLKVEKVIVVPGNTEED
CCCEEECCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCC
PMTKKELGKSAANYLREIIRYDSVIALTGGSTVLEVANGMPQLYAQSEIVVVPARGGLGR
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHHCCCCEEEEECCCCCCH
EVEKQANTIASILAKKLGGTYKMLYVPDHLSKEAVESLMKEPDIKEVVDILKKADILIFG
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEE
IGRADVMADRRNLPQSIKDFLKEKGAVAESLGYYFDKEGKIVYATPSIFLTIDDLKSVKH
CCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCEEEEEHHHHHHHHH
LIGVSGGKSKAEAILATCRSGNVKVLVTDEGAAFEILRMV
HHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCC
>Mature Secondary Structure
MKDIIALQQKIVPELIELLQKRYAIMRNIYFNQPIGRRALSHQLNIGERIIRTEVSFLKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLIDINPMGMTVTKEGEELIESLKDFIHELKGLDNIEKVLEEKLKVEKVIVVPGNTEED
CCCEEECCCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCC
PMTKKELGKSAANYLREIIRYDSVIALTGGSTVLEVANGMPQLYAQSEIVVVPARGGLGR
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHHCCCCEEEEECCCCCCH
EVEKQANTIASILAKKLGGTYKMLYVPDHLSKEAVESLMKEPDIKEVVDILKKADILIFG
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEE
IGRADVMADRRNLPQSIKDFLKEKGAVAESLGYYFDKEGKIVYATPSIFLTIDDLKSVKH
CCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCEEEEEHHHHHHHHH
LIGVSGGKSKAEAILATCRSGNVKVLVTDEGAAFEILRMV
HHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]