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The map label for this gene is yqfO [H]

Identifier: 20808172

GI number: 20808172

Start: 1699517

End: 1700647

Strand: Reverse

Name: yqfO [H]

Synonym: TTE1753

Alternate gene names: 20808172

Gene position: 1700647-1699517 (Counterclockwise)

Preceding gene: 20808173

Following gene: 20808171

Centisome position: 63.23

GC content: 40.76

Gene sequence:

>1131_bases
TTGAGGTGTTGGGCGATGGCAGTGAAATGCCAAACAATAGTTTCTATAATGGATAGGCTTGCGCCGCGCAAATTTGCCCA
GGATTGGGACAATGTGGGGTTAATTGTAGGAGACCCTTTACAGGATGTTTCGAAGATACTAGTAGCACTTGATGCCACTC
ATGAAGTTGTTGAAGAAGCTATAGAGAAAAAAGTAGATATGATTGTGACTCATCATCCGCTGATTTTTAAGTCTATAAAA
TCTGTCAGATCCGATACGCCAGTCGGCATGCTTGTCATGAAACTTATCAAACATGAGATTTCCCTTTATGCAGCTCATAC
TTCTTTTGATATAGCACCAAATGGCATGAATGACATCTTGTGCAATATATTGGGGATTTACGAAAGAGAAGTTCTAGATG
TCACATATTCAGAAGATTATAAAAAAGTCGTTGTGTACGTGCCCAAGGGATATGAAGATGTAGTGCGGAATGCCATGTGC
AGCGCAGGAGCAGGTTTTATAGGAAATTACAGCGATTCCACTTTTCAGGTAGAAGGCACAGGCACTTTCAAACCTATGGA
GGGAGCCGACCCATTTATTGGGGAAGTAGGGAAGTTAGAAAAGGTAGAAGAAATAAGACTGGAAACAGTAGTTCCACAAA
AATATTTGGATAAAGTGATAAACGCCATGCTAAGAGTCCATCCCTATGAAGAAGTTGCTTATGACGTTTATTCACTGGCA
AATCTCAGGGAAGAGTACGGACTTGGAAGAATAGGAGTCATTGAAGAGACGACTTTGAAAGAATTAGCCTTAAAGGTCAA
AGCAAAGCTTAAAGCTGAATCTCTCAAGGTGGTTGGCGATTTAGAAAGAAGAGTTAAAAAAGTTGCTGTATGCGGTGGAA
GTGGTGCAAGCCTAATTCATAAGGCTGTTATGAAAGGAGCGGATGTTTTAATAACTGCCGATATAGGCTATCACGATGCG
GTAGAAGCCCAGCACCTCGGTTTAGCTTTGATTGATGCTGGCCATTTTGCCACAGAAAACATAGCAGTGAGGTTTATCGC
AGAATACTTGATTGATGAAACTCAAAAACAAGGGCATGAAATAGAGGTCTTTGTAAGTGAAGTTCAAAAAGACCCTTTTA
CATGCCTTTAA

Upstream 100 bases:

>100_bases
GAGTTTTTGCTTTACAAGATACAAAAAATTCGAAGGATTTTGAATAAAATTCCACCTGGAGATCCAAAGAGAAAAGGCTT
AGAAGAGAAAATAAAAAAGC

Downstream 100 bases:

>100_bases
GTAAGGCTTGACAATAGCAAAAGCCTGTGGTAATATATCATTGTCTGATATAAAAAATGATATACAATGCATGTGAGTAA
GTCGGATGGCCGCGGGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRCWAMAVKCQTIVSIMDRLAPRKFAQDWDNVGLIVGDPLQDVSKILVALDATHEVVEEAIEKKVDMIVTHHPLIFKSIK
SVRSDTPVGMLVMKLIKHEISLYAAHTSFDIAPNGMNDILCNILGIYEREVLDVTYSEDYKKVVVYVPKGYEDVVRNAMC
SAGAGFIGNYSDSTFQVEGTGTFKPMEGADPFIGEVGKLEKVEEIRLETVVPQKYLDKVINAMLRVHPYEEVAYDVYSLA
NLREEYGLGRIGVIEETTLKELALKVKAKLKAESLKVVGDLERRVKKVAVCGGSGASLIHKAVMKGADVLITADIGYHDA
VEAQHLGLALIDAGHFATENIAVRFIAEYLIDETQKQGHEIEVFVSEVQKDPFTCL

Sequences:

>Translated_376_residues
MRCWAMAVKCQTIVSIMDRLAPRKFAQDWDNVGLIVGDPLQDVSKILVALDATHEVVEEAIEKKVDMIVTHHPLIFKSIK
SVRSDTPVGMLVMKLIKHEISLYAAHTSFDIAPNGMNDILCNILGIYEREVLDVTYSEDYKKVVVYVPKGYEDVVRNAMC
SAGAGFIGNYSDSTFQVEGTGTFKPMEGADPFIGEVGKLEKVEEIRLETVVPQKYLDKVINAMLRVHPYEEVAYDVYSLA
NLREEYGLGRIGVIEETTLKELALKVKAKLKAESLKVVGDLERRVKKVAVCGGSGASLIHKAVMKGADVLITADIGYHDA
VEAQHLGLALIDAGHFATENIAVRFIAEYLIDETQKQGHEIEVFVSEVQKDPFTCL
>Mature_376_residues
MRCWAMAVKCQTIVSIMDRLAPRKFAQDWDNVGLIVGDPLQDVSKILVALDATHEVVEEAIEKKVDMIVTHHPLIFKSIK
SVRSDTPVGMLVMKLIKHEISLYAAHTSFDIAPNGMNDILCNILGIYEREVLDVTYSEDYKKVVVYVPKGYEDVVRNAMC
SAGAGFIGNYSDSTFQVEGTGTFKPMEGADPFIGEVGKLEKVEEIRLETVVPQKYLDKVINAMLRVHPYEEVAYDVYSLA
NLREEYGLGRIGVIEETTLKELALKVKAKLKAESLKVVGDLERRVKKVAVCGGSGASLIHKAVMKGADVLITADIGYHDA
VEAQHLGLALIDAGHFATENIAVRFIAEYLIDETQKQGHEIEVFVSEVQKDPFTCL

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=375, Percent_Identity=27.7333333333333, Blast_Score=128, Evalue=7e-30,
Organism=Homo sapiens, GI215272360, Length=375, Percent_Identity=27.7333333333333, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI56605983, Length=375, Percent_Identity=27.7333333333333, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI215272362, Length=131, Percent_Identity=32.824427480916, Blast_Score=93, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6321217, Length=118, Percent_Identity=33.8983050847458, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19921430, Length=120, Percent_Identity=34.1666666666667, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41675; Mature: 41675

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCWAMAVKCQTIVSIMDRLAPRKFAQDWDNVGLIVGDPLQDVSKILVALDATHEVVEEA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
IEKKVDMIVTHHPLIFKSIKSVRSDTPVGMLVMKLIKHEISLYAAHTSFDIAPNGMNDIL
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHH
CNILGIYEREVLDVTYSEDYKKVVVYVPKGYEDVVRNAMCSAGAGFIGNYSDSTFQVEGT
HHHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
GTFKPMEGADPFIGEVGKLEKVEEIRLETVVPQKYLDKVINAMLRVHPYEEVAYDVYSLA
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NLREEYGLGRIGVIEETTLKELALKVKAKLKAESLKVVGDLERRVKKVAVCGGSGASLIH
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHH
KAVMKGADVLITADIGYHDAVEAQHLGLALIDAGHFATENIAVRFIAEYLIDETQKQGHE
HHHHCCCCEEEEECCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCE
IEVFVSEVQKDPFTCL
EEEHHHHHCCCCCCCC
>Mature Secondary Structure
MRCWAMAVKCQTIVSIMDRLAPRKFAQDWDNVGLIVGDPLQDVSKILVALDATHEVVEEA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
IEKKVDMIVTHHPLIFKSIKSVRSDTPVGMLVMKLIKHEISLYAAHTSFDIAPNGMNDIL
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHH
CNILGIYEREVLDVTYSEDYKKVVVYVPKGYEDVVRNAMCSAGAGFIGNYSDSTFQVEGT
HHHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
GTFKPMEGADPFIGEVGKLEKVEEIRLETVVPQKYLDKVINAMLRVHPYEEVAYDVYSLA
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NLREEYGLGRIGVIEETTLKELALKVKAKLKAESLKVVGDLERRVKKVAVCGGSGASLIH
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHH
KAVMKGADVLITADIGYHDAVEAQHLGLALIDAGHFATENIAVRFIAEYLIDETQKQGHE
HHHHCCCCEEEEECCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCE
IEVFVSEVQKDPFTCL
EEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]