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The map label for this gene is yutI [H]

Identifier: 20808161

GI number: 20808161

Start: 1686953

End: 1687174

Strand: Reverse

Name: yutI [H]

Synonym: TTE1742

Alternate gene names: 20808161

Gene position: 1687174-1686953 (Counterclockwise)

Preceding gene: 20808162

Following gene: 20808160

Centisome position: 62.73

GC content: 39.64

Gene sequence:

>222_bases
GTGAGAGAGAGAGTAGAAGAGATATTAAACCTTATAAAACCTTCACTTCAGGCAGATGGAGGAGATGTAGAGCTTGTAGA
TGTCACCGAAGACGGTGTTGTAAAAGTGAAATTGACTGGAGCCTGTGGAGGTTGCCCTTTTGCTACTTTGACGCTAAAAG
AGGGTATTGAAAGAGCAATTAAAGAGGAAATTCCAGAAGTAAAAGAAGTTATAGCAGTTTAA

Upstream 100 bases:

>100_bases
GACTTGGCTGCTTTTGATGATAAGGATAAAATATTTTTAGAGGAAGTGGCTAAAATTATTGGTAGAAAATTAGAAGGAAA
GTTTTAAAGGAGGGATTTAG

Downstream 100 bases:

>100_bases
TCCGGGTCTTCCCGGATTTTTTATTTTACGTAAGTTTCGGGAAAGCTAATTAGAGGAGATTATCGACAAAGAAGGGGTGA
AGGTATGGAAGATAGGTTTT

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MRERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIKEEIPEVKEVIAV

Sequences:

>Translated_73_residues
MRERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIKEEIPEVKEVIAV
>Mature_73_residues
MRERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIKEEIPEVKEVIAV

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Escherichia coli, GI1789819, Length=71, Percent_Identity=45.0704225352113, Blast_Score=64, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17541876, Length=70, Percent_Identity=51.4285714285714, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 7863; Mature: 7863

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAI
CHHHHHHHHHHHCHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
KEEIPEVKEVIAV
HHHHHHHHHHHCC
>Mature Secondary Structure
MRERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAI
CHHHHHHHHHHHCHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
KEEIPEVKEVIAV
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]