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The map label for this gene is cooS2 [H]

Identifier: 20808133

GI number: 20808133

Start: 1656646

End: 1658574

Strand: Reverse

Name: cooS2 [H]

Synonym: TTE1708

Alternate gene names: 20808133

Gene position: 1658574-1656646 (Counterclockwise)

Preceding gene: 20808134

Following gene: 20808132

Centisome position: 61.67

GC content: 60.6

Gene sequence:

>1929_bases
ATGACTAAACAGTGTAAGGTTTCTTTGGATCCGGCGGTTTGCGAGATGGTAGAAAAGGCCAGGCGCGTGAAGGTGGAGAC
GGTCTGGGACCGCTACCAGGCCATGCTCCCACAGTGCGGCTTTGGTGAAACCGGGCTGTGCTGCCGGCACTGCCTGCAAG
GCCCCTGCCGCATTGATCCCTTCGGAGGCGAACCCAAGCTCGGCATATGCGGGGCTACTGCGGACGTCATTGTAGCCCGG
GGCCTTGATCGAGCTATTGCAGCGGGGGCGGCGTCCCATTCTGGCCATGCCAGACACCTGGCCCATACCCTAAAGCTGGC
GGCCAAGGGCAAGGCGCGGGACTACACCATTAAAGACAAAGCCAAGCTGCGCTCTGTGGCTGCGCGACTCGGCATCCCCA
CCGAGGGGAGAAGTATCGCAGAGATTGCTTTAGATGTGGCGGAAGCGGCCCTGGCTGATTTCCACGAGAAAGACACACCG
GTAATGTGGGCAGCCACCACTGTGACTAAGAAGCGGGCTAGACTATTTGAGGAAAAAGGTTTGCTCCCCAAGGGTATAGA
CTACGAAGTATCCGATATCATGCACCGTACCAGCTACGGCGTAGATGCGGACCCCGTTAACCTGCTTCTGGGCGGGTTGC
GATGTGGTTTGGCAGACCTGGCCGGCTGCTATATGGGCACAGACATGGCCGACATCCTCTTCGGTACTCCCCAGCCGGTG
GTGACGGAGGCTAATATGGGGGTGTTGAAGGCCGATGCCGTCAACGTGGCGGTCCACGGCCATAACCCGGTCCTTTCTGA
AGTGATCGTTGCGGTGGCCAAGGAGATGGAGGCCGAGGCCAAGGCGGCTGGCGCTTCTGGCATCAATGTGGTGGGCATCT
GCTGTACAGGCAATGAGGTACTGATGCGGCACGGCATTCCGGCCTGCACTCACTCGGTGAGCCAGGAGATGGCCCTGGTA
ACCGGTGCGCTGGATGCCATGGTGGTGGATTACCAGTGCATCATGCCCTCCCTGGCCACGGTGGCCGAATGTATGGGCAC
TAAGCTCATCACTACCATGGAGATCGCCAAAATCCCCGGTGCCATCCATATCGAGTTTTCAGAGGAGAAAGCCGGGGAGA
AAGCCCGGGAGATCCTCCGCCTGGCCATCGAGACTTTCACCCGGCGCCGGGGTAAGCCGGTGGACATACCGCCATATAAG
ACCAAAGTGGTTGCAGGCTTTTCCGTGGAAGCCATCGTGAAAGCCCTCTCTAAGCTAAATGCCGAGGATCCTTTGAAACC
CCTGATCGACCAGATCGCCGCCGGCAATATACGAGGAGTCTGCCTCTTCGCCGGGTGCAACAACGTCAAGGTTCCGCAGG
ACCAGAATTTTACCGCCATAGCTCGCAGGCTACTTAAGGAGAACGTGCTGGTTCTGGCTACCGGCTGCGGAGCAGGTGCG
CTCATGCGCCACGGGTTCATGGATCCGGCCAACGTGGGCGAGCTCTGCGGAGAAGGTTTGAAGGCGGTCCTGACCGCCAT
AGGTGAGGCCAACGGGTTGGGTGGGCCGCTGCCACCGGTGCTGCATGTGGGCTCCTGCGTGGACAATTCGAGGGCGGTGG
CCCTGGCTGTGGCGGTGGCCGACCGGCTGGGCGTAGATACGGATCAGCTGCCGGTGGTGGCTTCGGCTGCTGAGGCAGTG
GCGGAGAAAGCCGTCTCCATCGGGACCTATGCCGTGGCTCTGGGCTTACCAACCCACGTGGGAGTCATGCTGCCGGTCCT
GGGGGGCCCTCTGGTTACCAAAGTGCTGACAGACAAAGTCAAGGAGTTGACCGGTGGTTACTTTATCGTGGACCTAGACC
CCGAGTCCGCGGCCGAAAAGCTCCTGGCGGCCATTGACGAGCGCAGGGCTGCTCTGGGGCTCAGCGTTCCGGGAGGTGGG
CGGCGATGA

Upstream 100 bases:

>100_bases
AGGTAGGACTTTATGCCATAAGCAATTTTTAACTTAAAACAAGCACTAATACTTAAAAGCTTGCGGCGTTGCCGCCTATT
ATTAAAGGAGGTTGATGTTT

Downstream 100 bases:

>100_bases
TACGGAGAGAGATCTTCGTCCGTTATGATCGATGTGTAGGCTGCCATTCCTGTGAGCTGGCCTGCGCCATAAGCCATACC
GCGGCCCGAGACTTGTTTGG

Product: carbon monoxide dehydrogenase subunit CooS

Products: NA

Alternate protein names: CODH 2 [H]

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MTKQCKVSLDPAVCEMVEKARRVKVETVWDRYQAMLPQCGFGETGLCCRHCLQGPCRIDPFGGEPKLGICGATADVIVAR
GLDRAIAAGAASHSGHARHLAHTLKLAAKGKARDYTIKDKAKLRSVAARLGIPTEGRSIAEIALDVAEAALADFHEKDTP
VMWAATTVTKKRARLFEEKGLLPKGIDYEVSDIMHRTSYGVDADPVNLLLGGLRCGLADLAGCYMGTDMADILFGTPQPV
VTEANMGVLKADAVNVAVHGHNPVLSEVIVAVAKEMEAEAKAAGASGINVVGICCTGNEVLMRHGIPACTHSVSQEMALV
TGALDAMVVDYQCIMPSLATVAECMGTKLITTMEIAKIPGAIHIEFSEEKAGEKAREILRLAIETFTRRRGKPVDIPPYK
TKVVAGFSVEAIVKALSKLNAEDPLKPLIDQIAAGNIRGVCLFAGCNNVKVPQDQNFTAIARRLLKENVLVLATGCGAGA
LMRHGFMDPANVGELCGEGLKAVLTAIGEANGLGGPLPPVLHVGSCVDNSRAVALAVAVADRLGVDTDQLPVVASAAEAV
AEKAVSIGTYAVALGLPTHVGVMLPVLGGPLVTKVLTDKVKELTGGYFIVDLDPESAAEKLLAAIDERRAALGLSVPGGG
RR

Sequences:

>Translated_642_residues
MTKQCKVSLDPAVCEMVEKARRVKVETVWDRYQAMLPQCGFGETGLCCRHCLQGPCRIDPFGGEPKLGICGATADVIVAR
GLDRAIAAGAASHSGHARHLAHTLKLAAKGKARDYTIKDKAKLRSVAARLGIPTEGRSIAEIALDVAEAALADFHEKDTP
VMWAATTVTKKRARLFEEKGLLPKGIDYEVSDIMHRTSYGVDADPVNLLLGGLRCGLADLAGCYMGTDMADILFGTPQPV
VTEANMGVLKADAVNVAVHGHNPVLSEVIVAVAKEMEAEAKAAGASGINVVGICCTGNEVLMRHGIPACTHSVSQEMALV
TGALDAMVVDYQCIMPSLATVAECMGTKLITTMEIAKIPGAIHIEFSEEKAGEKAREILRLAIETFTRRRGKPVDIPPYK
TKVVAGFSVEAIVKALSKLNAEDPLKPLIDQIAAGNIRGVCLFAGCNNVKVPQDQNFTAIARRLLKENVLVLATGCGAGA
LMRHGFMDPANVGELCGEGLKAVLTAIGEANGLGGPLPPVLHVGSCVDNSRAVALAVAVADRLGVDTDQLPVVASAAEAV
AEKAVSIGTYAVALGLPTHVGVMLPVLGGPLVTKVLTDKVKELTGGYFIVDLDPESAAEKLLAAIDERRAALGLSVPGGG
RR
>Mature_641_residues
TKQCKVSLDPAVCEMVEKARRVKVETVWDRYQAMLPQCGFGETGLCCRHCLQGPCRIDPFGGEPKLGICGATADVIVARG
LDRAIAAGAASHSGHARHLAHTLKLAAKGKARDYTIKDKAKLRSVAARLGIPTEGRSIAEIALDVAEAALADFHEKDTPV
MWAATTVTKKRARLFEEKGLLPKGIDYEVSDIMHRTSYGVDADPVNLLLGGLRCGLADLAGCYMGTDMADILFGTPQPVV
TEANMGVLKADAVNVAVHGHNPVLSEVIVAVAKEMEAEAKAAGASGINVVGICCTGNEVLMRHGIPACTHSVSQEMALVT
GALDAMVVDYQCIMPSLATVAECMGTKLITTMEIAKIPGAIHIEFSEEKAGEKAREILRLAIETFTRRRGKPVDIPPYKT
KVVAGFSVEAIVKALSKLNAEDPLKPLIDQIAAGNIRGVCLFAGCNNVKVPQDQNFTAIARRLLKENVLVLATGCGAGAL
MRHGFMDPANVGELCGEGLKAVLTAIGEANGLGGPLPPVLHVGSCVDNSRAVALAVAVADRLGVDTDQLPVVASAAEAVA
EKAVSIGTYAVALGLPTHVGVMLPVLGGPLVTKVLTDKVKELTGGYFIVDLDPESAAEKLLAAIDERRAALGLSVPGGGR
R

Specific function: CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH) [H]

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Note=Loosely attached to the inner membrane, probably via CooF [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 67306; Mature: 67175

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQCKVSLDPAVCEMVEKARRVKVETVWDRYQAMLPQCGFGETGLCCRHCLQGPCRIDP
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECC
FGGEPKLGICGATADVIVARGLDRAIAAGAASHSGHARHLAHTLKLAAKGKARDYTIKDK
CCCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHH
AKLRSVAARLGIPTEGRSIAEIALDVAEAALADFHEKDTPVMWAATTVTKKRARLFEEKG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCC
LLPKGIDYEVSDIMHRTSYGVDADPVNLLLGGLRCGLADLAGCYMGTDMADILFGTPQPV
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCE
VTEANMGVLKADAVNVAVHGHNPVLSEVIVAVAKEMEAEAKAAGASGINVVGICCTGNEV
EEECCCCEEEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
LMRHGIPACTHSVSQEMALVTGALDAMVVDYQCIMPSLATVAECMGTKLITTMEIAKIPG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
AIHIEFSEEKAGEKAREILRLAIETFTRRRGKPVDIPPYKTKVVAGFSVEAIVKALSKLN
EEEEEECHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC
AEDPLKPLIDQIAAGNIRGVCLFAGCNNVKVPQDQNFTAIARRLLKENVLVLATGCGAGA
CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHH
LMRHGFMDPANVGELCGEGLKAVLTAIGEANGLGGPLPPVLHVGSCVDNSRAVALAVAVA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
DRLGVDTDQLPVVASAAEAVAEKAVSIGTYAVALGLPTHVGVMLPVLGGPLVTKVLTDKV
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHHHHHHHH
KELTGGYFIVDLDPESAAEKLLAAIDERRAALGLSVPGGGRR
HHHCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure 
TKQCKVSLDPAVCEMVEKARRVKVETVWDRYQAMLPQCGFGETGLCCRHCLQGPCRIDP
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECC
FGGEPKLGICGATADVIVARGLDRAIAAGAASHSGHARHLAHTLKLAAKGKARDYTIKDK
CCCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHH
AKLRSVAARLGIPTEGRSIAEIALDVAEAALADFHEKDTPVMWAATTVTKKRARLFEEKG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCC
LLPKGIDYEVSDIMHRTSYGVDADPVNLLLGGLRCGLADLAGCYMGTDMADILFGTPQPV
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCE
VTEANMGVLKADAVNVAVHGHNPVLSEVIVAVAKEMEAEAKAAGASGINVVGICCTGNEV
EEECCCCEEEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHH
LMRHGIPACTHSVSQEMALVTGALDAMVVDYQCIMPSLATVAECMGTKLITTMEIAKIPG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
AIHIEFSEEKAGEKAREILRLAIETFTRRRGKPVDIPPYKTKVVAGFSVEAIVKALSKLN
EEEEEECHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC
AEDPLKPLIDQIAAGNIRGVCLFAGCNNVKVPQDQNFTAIARRLLKENVLVLATGCGAGA
CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHH
LMRHGFMDPANVGELCGEGLKAVLTAIGEANGLGGPLPPVLHVGSCVDNSRAVALAVAVA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
DRLGVDTDQLPVVASAAEAVAEKAVSIGTYAVALGLPTHVGVMLPVLGGPLVTKVLTDKV
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHHHHHHHH
KELTGGYFIVDLDPESAAEKLLAAIDERRAALGLSVPGGGRR
HHHCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11024270; 11489867; 11509720 [H]