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The map label for this gene is CooC [H]

Identifier: 20808134

GI number: 20808134

Start: 1658881

End: 1659627

Strand: Reverse

Name: CooC [H]

Synonym: TTE1709

Alternate gene names: 20808134

Gene position: 1659627-1658881 (Counterclockwise)

Preceding gene: 20808135

Following gene: 20808133

Centisome position: 61.71

GC content: 40.29

Gene sequence:

>747_bases
ATGAAAATCGCTATTTCTGGGAAAGGTGGTGTAGGTAAAACCACTATAGCTGCAGGTTTAATTAAATATTTTGCACAAAA
GGGTTACCAAGTATATGCTGTAGATGCAGACCCTGATACCAGTTTGGGGATGATACTAGGGCTTCCTGAGGAAAGGATTG
GCAGTCTTAAACCCATTGTAGCTATGCGGGAATTGATTGCTGAACGGACAGGGGGAAATGGTGCTTTCTTTTCTTTAAAT
CCGGATGTAGACAGTATTTTGGAAGATTACACTATTCGAAATGGCAATATTCTTTTTTTAAAAATGGGAGCCGTCAAACC
GGGAGGTTCTGAGTGTTATTGCCGGGAAAACACGGTACTTAATGCTCTTGTAAATTCTATTATTTTAAAACGCAAAGAAA
TTGTGGTTATGGATATGAGTGCTGGAATTGAGCATCTTACAAGAGGGACTGCCCGTGGGGTAGACATCATGCTAATTGTC
ACGGAACCTACTCTGGTTAGTATACAAACAGCCAGAACTATACAAAAACTAGCTACAGAACTTGGTATTTCCAAGATAAA
ATTTGTCGCTAATAAAATTCGTCAATCAAAGGATGAAGAATTTATTCTTAGCCACCTGCCCCCAGGTGATGTTATTGGCC
TGATTCCATTCCAAACGGAAATTTTAGACCAGGCTGCCGGTTTTAACAGTGAGCAGTCTTTTACGGCAGCAGGTATTACC
GAACTGGCTACTAGGTTGTTAAACTAA

Upstream 100 bases:

>100_bases
AGACCGGTTGATTTTAACGGTCTTTTTCTTTTGGCACGATTTTTGCTAAACAGATAGAAATGGATTTAAGGTGTACCATA
TAAGGATTGGAGGTATTTGA

Downstream 100 bases:

>100_bases
CTAGATGTTGCCCGAGCGTATTCAACCGGAGTTCTCCGCAGAGATAGCCGTGGCCTTGATTAAGGGAGCAAAAACCAAGG
AGGTGAAGTTCAACTAAATG

Product: CO dehydrogenas ematuration factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKIAISGKGGVGKTTIAAGLIKYFAQKGYQVYAVDADPDTSLGMILGLPEERIGSLKPIVAMRELIAERTGGNGAFFSLN
PDVDSILEDYTIRNGNILFLKMGAVKPGGSECYCRENTVLNALVNSIILKRKEIVVMDMSAGIEHLTRGTARGVDIMLIV
TEPTLVSIQTARTIQKLATELGISKIKFVANKIRQSKDEEFILSHLPPGDVIGLIPFQTEILDQAAGFNSEQSFTAAGIT
ELATRLLN

Sequences:

>Translated_248_residues
MKIAISGKGGVGKTTIAAGLIKYFAQKGYQVYAVDADPDTSLGMILGLPEERIGSLKPIVAMRELIAERTGGNGAFFSLN
PDVDSILEDYTIRNGNILFLKMGAVKPGGSECYCRENTVLNALVNSIILKRKEIVVMDMSAGIEHLTRGTARGVDIMLIV
TEPTLVSIQTARTIQKLATELGISKIKFVANKIRQSKDEEFILSHLPPGDVIGLIPFQTEILDQAAGFNSEQSFTAAGIT
ELATRLLN
>Mature_248_residues
MKIAISGKGGVGKTTIAAGLIKYFAQKGYQVYAVDADPDTSLGMILGLPEERIGSLKPIVAMRELIAERTGGNGAFFSLN
PDVDSILEDYTIRNGNILFLKMGAVKPGGSECYCRENTVLNALVNSIILKRKEIVVMDMSAGIEHLTRGTARGVDIMLIV
TEPTLVSIQTARTIQKLATELGISKIKFVANKIRQSKDEEFILSHLPPGDVIGLIPFQTEILDQAAGFNSEQSFTAAGIT
ELATRLLN

Specific function: Involved in the insertion of nickel into the carbon monoxide dehydrogenase (CODH) [H]

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 26742; Mature: 26742

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAISGKGGVGKTTIAAGLIKYFAQKGYQVYAVDADPDTSLGMILGLPEERIGSLKPIV
CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCHHHHCCCCHHH
AMRELIAERTGGNGAFFSLNPDVDSILEDYTIRNGNILFLKMGAVKPGGSECYCRENTVL
HHHHHHHHCCCCCEEEEEECCCHHHHHHHCEECCCCEEEEEECCCCCCCCCEEECCHHHH
NALVNSIILKRKEIVVMDMSAGIEHLTRGTARGVDIMLIVTEPTLVSIQTARTIQKLATE
HHHHHHHHHCCCEEEEEEHHHCHHHHHCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHH
LGISKIKFVANKIRQSKDEEFILSHLPPGDVIGLIPFQTEILDQAAGFNSEQSFTAAGIT
HCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
ELATRLLN
HHHHHHCC
>Mature Secondary Structure
MKIAISGKGGVGKTTIAAGLIKYFAQKGYQVYAVDADPDTSLGMILGLPEERIGSLKPIV
CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCHHHHCCCCHHH
AMRELIAERTGGNGAFFSLNPDVDSILEDYTIRNGNILFLKMGAVKPGGSECYCRENTVL
HHHHHHHHCCCCCEEEEEECCCHHHHHHHCEECCCCEEEEEECCCCCCCCCEEECCHHHH
NALVNSIILKRKEIVVMDMSAGIEHLTRGTARGVDIMLIVTEPTLVSIQTARTIQKLATE
HHHHHHHHHCCCEEEEEEHHHCHHHHHCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHH
LGISKIKFVANKIRQSKDEEFILSHLPPGDVIGLIPFQTEILDQAAGFNSEQSFTAAGIT
HCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
ELATRLLN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9079911; 1644755 [H]