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The map label for this gene is BaeS8 [H]

Identifier: 20808108

GI number: 20808108

Start: 1630714

End: 1631880

Strand: Reverse

Name: BaeS8 [H]

Synonym: TTE1682

Alternate gene names: 20808108

Gene position: 1631880-1630714 (Counterclockwise)

Preceding gene: 20808109

Following gene: 20808107

Centisome position: 60.68

GC content: 39.16

Gene sequence:

>1167_bases
ATGACTCAAAGTAGTGAAGTCCTGTATAAAAAAAGATTAGAAAACATTGTAGAAAAAACTATTGAAGTCATTGAAAGCAG
CAAGCAACAGATTTTTGAGATCCTTGAAAAAGCAAAAGATGAAGCTAGAAAGCTGGAAGCACAGTTGGAAGAACTTAAAG
TTCAGGTGATAAACGTCATAAAAGAAGTGGAAATGTGTGAGAAAAAAGAAAAAAAATGTCGACTGAAATTGGCTTTGGTG
AGCAAACAGTTTGGTCACCTCTCTGAGCAGGCAATAAAAGAAGCTTATGAGGAGGCAAAAGAGGCGCAGATAGAGTTGGC
TCTAAAAAGGAGAGAAGAAAAGGAGCTTATAGAGAGGAGAAATGAACTAGAGAGGAAGCTTCTTGATACGAAAGCCATTA
TAGAAAAGGCTGAAAAGTTATCTTCCCAGATAAACATAGCTTTAAATTATTTGAATGGAGATTTGAAGGCGATGAACCTA
CAGCTGGAGCAACTCAAGGACAAGCAGGCTTTGAGCGTGAAGATCATTGAGGCCCAAGAGGAAGAAAGGAAAAGAATTGC
AAGAGAGATTCACGATGGACCGGCTCAAGCAATGGCAAATGTTCTTTTAAAGTCAGAATTATGTGAAAAGTTAATCACAA
AGGATGTGGAGCAGGCAAGGTTAGAACTCAAAAATTTAAAAGAAATTGTCCAGCAGTCTTTGAAGGAAGTCAGAAAGATA
ATCTACGATTTGAGACCTTCTGCATTGGACGATTTAGGCCTTGTACCCGCTTTGTCCAGGTACATAAAGAATTTTGAAGA
AGAGACCGGGATACATGTTGATTTTACTGTGCTTTCAGATTACCAGAGGTTGAGTCCAGAGATTGAGGTCACATGTTTTC
GCGTGGTGCAGGAGGCCCTCACAAATATAAAAAAGCATTCCAGGGCAAAGACTGCTTCAATTAAGTTTGAGTTTGGGATG
AAATTTGTAAGCATAATCATAAAAGACGATGGGATAGGATTTGATAAAGAAAAGATAGGACAGGGATATGGCCTTATGGG
GATGAGGGAGAGGGTGGAAATTTTGAATGGAAAGTTTGAGATAAGCAGTTTCAAAGGCAAAGGGACTCAAATTTACATTT
CCATTCCTGTAAGGGGTGTTGAGGATGATTCGGTTGCTAGTGGCTGA

Upstream 100 bases:

>100_bases
TTTTTTGCCTTCTTCAAGTTTAGCATTTTTTTCTTCAAAATGCAGGATTTTTTACTTTTTTGTCGAATTATTAAAACAAT
GGGCTCAGGAGGTGAGATGA

Downstream 100 bases:

>100_bases
TGACCACGCTCTCATAAGAAAAGGACTTGTCCAGCTGATAGAACTTGAGAAGGATATAAGAGTGATATCCCAAGCTTCAA
ATGGTGAGGAAGCTTACAGG

Product: sensory transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTQSSEVLYKKRLENIVEKTIEVIESSKQQIFEILEKAKDEARKLEAQLEELKVQVINVIKEVEMCEKKEKKCRLKLALV
SKQFGHLSEQAIKEAYEEAKEAQIELALKRREEKELIERRNELERKLLDTKAIIEKAEKLSSQINIALNYLNGDLKAMNL
QLEQLKDKQALSVKIIEAQEEERKRIAREIHDGPAQAMANVLLKSELCEKLITKDVEQARLELKNLKEIVQQSLKEVRKI
IYDLRPSALDDLGLVPALSRYIKNFEEETGIHVDFTVLSDYQRLSPEIEVTCFRVVQEALTNIKKHSRAKTASIKFEFGM
KFVSIIIKDDGIGFDKEKIGQGYGLMGMRERVEILNGKFEISSFKGKGTQIYISIPVRGVEDDSVASG

Sequences:

>Translated_388_residues
MTQSSEVLYKKRLENIVEKTIEVIESSKQQIFEILEKAKDEARKLEAQLEELKVQVINVIKEVEMCEKKEKKCRLKLALV
SKQFGHLSEQAIKEAYEEAKEAQIELALKRREEKELIERRNELERKLLDTKAIIEKAEKLSSQINIALNYLNGDLKAMNL
QLEQLKDKQALSVKIIEAQEEERKRIAREIHDGPAQAMANVLLKSELCEKLITKDVEQARLELKNLKEIVQQSLKEVRKI
IYDLRPSALDDLGLVPALSRYIKNFEEETGIHVDFTVLSDYQRLSPEIEVTCFRVVQEALTNIKKHSRAKTASIKFEFGM
KFVSIIIKDDGIGFDKEKIGQGYGLMGMRERVEILNGKFEISSFKGKGTQIYISIPVRGVEDDSVASG
>Mature_387_residues
TQSSEVLYKKRLENIVEKTIEVIESSKQQIFEILEKAKDEARKLEAQLEELKVQVINVIKEVEMCEKKEKKCRLKLALVS
KQFGHLSEQAIKEAYEEAKEAQIELALKRREEKELIERRNELERKLLDTKAIIEKAEKLSSQINIALNYLNGDLKAMNLQ
LEQLKDKQALSVKIIEAQEEERKRIAREIHDGPAQAMANVLLKSELCEKLITKDVEQARLELKNLKEIVQQSLKEVRKII
YDLRPSALDDLGLVPALSRYIKNFEEETGIHVDFTVLSDYQRLSPEIEVTCFRVVQEALTNIKKHSRAKTASIKFEFGMK
FVSIIIKDDGIGFDKEKIGQGYGLMGMRERVEILNGKFEISSFKGKGTQIYISIPVRGVEDDSVASG

Specific function: Involved in a sensory transduction pathway that affect the production of enzymes that degrade polymeric carbon and nitrogen sources. DegS probably acts as a kinase that phosphorylates degU [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87082311, Length=239, Percent_Identity=32.2175732217573, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1788812, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787474, Length=208, Percent_Identity=27.4038461538462, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR008595
- InterPro:   IPR011712
- InterPro:   IPR005467
- InterPro:   IPR016381 [H]

Pfam domain/function: PF05384 DegS; PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 44507; Mature: 44376

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSSEVLYKKRLENIVEKTIEVIESSKQQIFEILEKAKDEARKLEAQLEELKVQVINVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVEMCEKKEKKCRLKLALVSKQFGHLSEQAIKEAYEEAKEAQIELALKRREEKELIERR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NELERKLLDTKAIIEKAEKLSSQINIALNYLNGDLKAMNLQLEQLKDKQALSVKIIEAQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHEEEEEHHHH
EERKRIAREIHDGPAQAMANVLLKSELCEKLITKDVEQARLELKNLKEIVQQSLKEVRKI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDLRPSALDDLGLVPALSRYIKNFEEETGIHVDFTVLSDYQRLSPEIEVTCFRVVQEAL
HHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHH
TNIKKHSRAKTASIKFEFGMKFVSIIIKDDGIGFDKEKIGQGYGLMGMRERVEILNGKFE
HHHHHHCCCHHHEEEHHHHHHHHHHEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCCEE
ISSFKGKGTQIYISIPVRGVEDDSVASG
EEECCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TQSSEVLYKKRLENIVEKTIEVIESSKQQIFEILEKAKDEARKLEAQLEELKVQVINVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVEMCEKKEKKCRLKLALVSKQFGHLSEQAIKEAYEEAKEAQIELALKRREEKELIERR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NELERKLLDTKAIIEKAEKLSSQINIALNYLNGDLKAMNLQLEQLKDKQALSVKIIEAQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHEEEEEHHHH
EERKRIAREIHDGPAQAMANVLLKSELCEKLITKDVEQARLELKNLKEIVQQSLKEVRKI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDLRPSALDDLGLVPALSRYIKNFEEETGIHVDFTVLSDYQRLSPEIEVTCFRVVQEAL
HHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHH
TNIKKHSRAKTASIKFEFGMKFVSIIIKDDGIGFDKEKIGQGYGLMGMRERVEILNGKFE
HHHHHHCCCHHHEEEHHHHHHHHHHEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCCEE
ISSFKGKGTQIYISIPVRGVEDDSVASG
EEECCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7765823 [H]