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The map label for this gene is CbiQ2

Identifier: 20808017

GI number: 20808017

Start: 1544267

End: 1545016

Strand: Reverse

Name: CbiQ2

Synonym: TTE1588

Alternate gene names: NA

Gene position: 1545016-1544267 (Counterclockwise)

Preceding gene: 20808018

Following gene: 20808016

Centisome position: 57.45

GC content: 32.4

Gene sequence:

>750_bases
ATGGAGATGTTTCTTTACATGGATAAAGATAGTATTTTACATAAATTAGACCCTAGGACAAAAATATTTATCATGTTAAT
AAGCTTTGCAATAGCTTTAATGTTTAGCTCTTTATCTTTGCTCCTTATCCTTTCTTTTCTGGTCATATTATATGGAGCTT
TAGGGAAAGTTCTCAGCAATTTAAAAAGGATACGAGTAATTTTGATAATGATTGCCATAATGTCAGTTATACTTTGGGCT
TTAACTTATCCGGGGACTACAAGGCTTTGGGGGCCTGTTACGAAAGAAGGAATTATATATGGAATCGCTATAGGAATAAA
ATTTGATGTAATGATAATAGCAGGCATGATATTTTTAAGCTCCACAAAAATTGAAGAAATATCTTTAGGTTTAGTAAAAC
TTGGCATACCTTATAGACCTGCTTTTGCGTTTTCTACTGCTGTGAGATTAGTTCCTATGATAGTTTCTACCAGTTACATA
ATAACGCAAGCACAAAAATCAAGAGGATTGGACCTGGATACAGGAAACATTTTACAAAGAATAAAAAAATACATTCATCT
TTTAATACCTGTTCTTATCTCCGTAATTAGGCAGGCAAATATATTGGCTATGGCTTTAGAGTCGAAAGGATTTGGATACA
GTGATAAGAGAACAAGCTATTTGGAGATAAAATTTGAAGTTAGGGATTATGCCTTTTTGGCAGTAGCTCTATTGATTTTG
ATTGTCGCAGTGTATTTTAAATTTAAATAG

Upstream 100 bases:

>100_bases
TCTCTGAAGCCCCCTTCAATAGTGAGTTTGAGCAACAGGCTTGGTAAGACATTCCTTTCTGTAGAAGAAATGGTCAGCTG
TACAAAGAGGTGAAAGCTTT

Downstream 100 bases:

>100_bases
CTGTAGGAGGTAAAGTCCTATGGAGAAAGCTATTATAGGTGGTACCGGAGTGTATGACGTAGCCGATAAAGTAGTTCAAA
AAAAGGTTGAAACGAAATAC

Product: ABC-type cobalt transport system, permease component CbiQ and related transporters

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEMFLYMDKDSILHKLDPRTKIFIMLISFAIALMFSSLSLLLILSFLVILYGALGKVLSNLKRIRVILIMIAIMSVILWA
LTYPGTTRLWGPVTKEGIIYGIAIGIKFDVMIIAGMIFLSSTKIEEISLGLVKLGIPYRPAFAFSTAVRLVPMIVSTSYI
ITQAQKSRGLDLDTGNILQRIKKYIHLLIPVLISVIRQANILAMALESKGFGYSDKRTSYLEIKFEVRDYAFLAVALLIL
IVAVYFKFK

Sequences:

>Translated_249_residues
MEMFLYMDKDSILHKLDPRTKIFIMLISFAIALMFSSLSLLLILSFLVILYGALGKVLSNLKRIRVILIMIAIMSVILWA
LTYPGTTRLWGPVTKEGIIYGIAIGIKFDVMIIAGMIFLSSTKIEEISLGLVKLGIPYRPAFAFSTAVRLVPMIVSTSYI
ITQAQKSRGLDLDTGNILQRIKKYIHLLIPVLISVIRQANILAMALESKGFGYSDKRTSYLEIKFEVRDYAFLAVALLIL
IVAVYFKFK
>Mature_249_residues
MEMFLYMDKDSILHKLDPRTKIFIMLISFAIALMFSSLSLLLILSFLVILYGALGKVLSNLKRIRVILIMIAIMSVILWA
LTYPGTTRLWGPVTKEGIIYGIAIGIKFDVMIIAGMIFLSSTKIEEISLGLVKLGIPYRPAFAFSTAVRLVPMIVSTSYI
ITQAQKSRGLDLDTGNILQRIKKYIHLLIPVLISVIRQANILAMALESKGFGYSDKRTSYLEIKFEVRDYAFLAVALLIL
IVAVYFKFK

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR003339 [H]

Pfam domain/function: PF00005 ABC_tran; PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 28025; Mature: 28025

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMFLYMDKDSILHKLDPRTKIFIMLISFAIALMFSSLSLLLILSFLVILYGALGKVLSN
CCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKRIRVILIMIAIMSVILWALTYPGTTRLWGPVTKEGIIYGIAIGIKFDVMIIAGMIFLS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHC
STKIEEISLGLVKLGIPYRPAFAFSTAVRLVPMIVSTSYIITQAQKSRGLDLDTGNILQR
CCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IKKYIHLLIPVLISVIRQANILAMALESKGFGYSDKRTSYLEIKFEVRDYAFLAVALLIL
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHH
IVAVYFKFK
HHHHHHCCC
>Mature Secondary Structure
MEMFLYMDKDSILHKLDPRTKIFIMLISFAIALMFSSLSLLLILSFLVILYGALGKVLSN
CCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKRIRVILIMIAIMSVILWALTYPGTTRLWGPVTKEGIIYGIAIGIKFDVMIIAGMIFLS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHC
STKIEEISLGLVKLGIPYRPAFAFSTAVRLVPMIVSTSYIITQAQKSRGLDLDTGNILQR
CCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IKKYIHLLIPVLISVIRQANILAMALESKGFGYSDKRTSYLEIKFEVRDYAFLAVALLIL
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHH
IVAVYFKFK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]