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The map label for this gene is UbiB4

Identifier: 20807967

GI number: 20807967

Start: 1494087

End: 1494830

Strand: Reverse

Name: UbiB4

Synonym: TTE1531

Alternate gene names: 20807967

Gene position: 1494830-1494087 (Counterclockwise)

Preceding gene: 20807968

Following gene: 20807966

Centisome position: 55.58

GC content: 41.4

Gene sequence:

>744_bases
TTGAGGTGGAAGATGAAGGCAAGAGTATTGTCCAATAGAAGAATAGCTTCTGAAGTCTATGAAATGACATTTGAGTGGAA
AGGAAAAAAACCTCATCCAGGGCAGTTTCTAATGATAGACTGCCAGGGAAAGACCTTTTTAAAAAGGCCGTTTAGTGTGA
ATGACTTTGAAGAGGAGAAAATGACAATTCTCTATCAAGTAAGGGGAGAAGGCACAAAAAATTTGTCTCAGATGAAAGAG
GGAGATATTCTTGAAATAACTGGCCCTCATGGCAATGGATTTGAGATTTTGGAAGGAAAGAGAGTTCTTATAGTGGGCGG
AGGAGTAGGAATTGCTCCCCTTTTGTACCTTGCTAAGAAAGTAAAGGCACAGAAGCTGTACATCGCTCTAGGCTTTAAAA
GAGAAACTTTTCTTGTGGAAAAATTTGAGGGGTTAGGGGAAGTTGTAGTGACTACAGAAGAAGGAAGTACGGGAAGAAAA
GGATTGGTAACTTCTGTAGTTGAGGAAATGATAGGAGAAGTGGATATAGTATACGGATGTGGACCAAAGCCCATGTTAAA
AGCTCTTCAGGAAATTTCGATGAAGGCAAACGTCTTATGCCAAATTTCTTTAGAAGAGAAAATGGCCTGTGGTATTGGGG
CCTGCCTTGGATGTGCGTGCAAGGTCAGAGAAGATAAAGGCTTTTCTTACAAGAGAGTTTGCAGAGATGGGCCGGTTTTC
TGGGCAGAGGAGGTGCTATTTTGA

Upstream 100 bases:

>100_bases
CCTATTCGGAATATGAGTATGGTCAGGCGGCAAGAGAAGAAGTGATTTTGATGACGGGCATGATCAACAATGCCCTTGTA
AAAAGAAAATACATTGCCAG

Downstream 100 bases:

>100_bases
ACCTATCGGTTGAGATTGGAAAGATAAAGCTTAAAAACCCTGTGATTACTGCCTCAGGAACTTTTGGTTTTGGCAGGGAG
TACAGTGAATACATCGACCT

Product: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRWKMKARVLSNRRIASEVYEMTFEWKGKKPHPGQFLMIDCQGKTFLKRPFSVNDFEEEKMTILYQVRGEGTKNLSQMKE
GDILEITGPHGNGFEILEGKRVLIVGGGVGIAPLLYLAKKVKAQKLYIALGFKRETFLVEKFEGLGEVVVTTEEGSTGRK
GLVTSVVEEMIGEVDIVYGCGPKPMLKALQEISMKANVLCQISLEEKMACGIGACLGCACKVREDKGFSYKRVCRDGPVF
WAEEVLF

Sequences:

>Translated_247_residues
MRWKMKARVLSNRRIASEVYEMTFEWKGKKPHPGQFLMIDCQGKTFLKRPFSVNDFEEEKMTILYQVRGEGTKNLSQMKE
GDILEITGPHGNGFEILEGKRVLIVGGGVGIAPLLYLAKKVKAQKLYIALGFKRETFLVEKFEGLGEVVVTTEEGSTGRK
GLVTSVVEEMIGEVDIVYGCGPKPMLKALQEISMKANVLCQISLEEKMACGIGACLGCACKVREDKGFSYKRVCRDGPVF
WAEEVLF
>Mature_247_residues
MRWKMKARVLSNRRIASEVYEMTFEWKGKKPHPGQFLMIDCQGKTFLKRPFSVNDFEEEKMTILYQVRGEGTKNLSQMKE
GDILEITGPHGNGFEILEGKRVLIVGGGVGIAPLLYLAKKVKAQKLYIALGFKRETFLVEKFEGLGEVVVTTEEGSTGRK
GLVTSVVEEMIGEVDIVYGCGPKPMLKALQEISMKANVLCQISLEEKMACGIGACLGCACKVREDKGFSYKRVCRDGPVF
WAEEVLF

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+)

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PYRK_THETN (P58885)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623138.1
- ProteinModelPortal:   P58885
- SMR:   P58885
- GeneID:   996609
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1531
- NMPDR:   fig|273068.3.peg.1485
- HOGENOM:   HBG730970
- OMA:   RPISICS
- ProtClustDB:   CLSK901294
- BioCyc:   TTEN273068:TTE1531-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01211_B
- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938
- PIRSF:   PIRSF006816
- PRINTS:   PR00409

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1; SSF63380 Riboflavin_synthase_like_b-brl

EC number: NA

Molecular weight: Translated: 27604; Mature: 27604

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS51384 FAD_FR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWKMKARVLSNRRIASEVYEMTFEWKGKKPHPGQFLMIDCQGKTFLKRPFSVNDFEEEK
CCCCHHHHHHHCCHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCC
MTILYQVRGEGTKNLSQMKEGDILEITGPHGNGFEILEGKRVLIVGGGVGIAPLLYLAKK
EEEEEEECCCCCCCHHHHCCCCEEEEECCCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
VKAQKLYIALGFKRETFLVEKFEGLGEVVVTTEEGSTGRKGLVTSVVEEMIGEVDIVYGC
HHHEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEC
GPKPMLKALQEISMKANVLCQISLEEKMACGIGACLGCACKVREDKGFSYKRVCRDGPVF
CCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCEE
WAEEVLF
HHHHHCC
>Mature Secondary Structure
MRWKMKARVLSNRRIASEVYEMTFEWKGKKPHPGQFLMIDCQGKTFLKRPFSVNDFEEEK
CCCCHHHHHHHCCHHHHHHHHEEEEECCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCC
MTILYQVRGEGTKNLSQMKEGDILEITGPHGNGFEILEGKRVLIVGGGVGIAPLLYLAKK
EEEEEEECCCCCCCHHHHCCCCEEEEECCCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
VKAQKLYIALGFKRETFLVEKFEGLGEVVVTTEEGSTGRKGLVTSVVEEMIGEVDIVYGC
HHHEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEC
GPKPMLKALQEISMKANVLCQISLEEKMACGIGACLGCACKVREDKGFSYKRVCRDGPVF
CCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCEE
WAEEVLF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336