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The map label for this gene is Smf [H]

Identifier: 20807897

GI number: 20807897

Start: 1425140

End: 1426228

Strand: Reverse

Name: Smf [H]

Synonym: TTE1450

Alternate gene names: 20807897

Gene position: 1426228-1425140 (Counterclockwise)

Preceding gene: 20807900

Following gene: 20807896

Centisome position: 53.03

GC content: 39.12

Gene sequence:

>1089_bases
GTGAACAGAGAAAAAGTTTTTAAGATATGGCTTAGTAGTGTAGTGGGGATAGGATACAAGTCCTATTTTCAATTGATGGA
GTTTTTTAAAAAGGCCGAGGAAATCTACAGGGCAAAAGAAATTGATATATTTAAGGCAACAGGAAAGAAAAATCTAACGG
AGAAAATAGTGGAGGCACAAAAATTAAACCCGTTTGAATATGTAGAAAGGTTGCAAAAATTAAAAGTAAGTGTATATACA
TTAGAAGAGGAGGAGTATCCTTCTATTCTTAGGGAAATTCACAACCCTCCTGTTGTCCTTTATTTGAAAGGCAGGTTAAA
TTTAAAAGACAAATTTTCAATTGCCATGGTAGGATCAAGAAAAGCTACGTACTATGGAAAGCAAATGGCTCAAAAACTCT
CTTACGACCTTTCAGAAAGAGGTATAACGGTTGTGAGCGGACTGGCAAGGGGTATAGATACATATTCCCATTTAGGTGCT
TTAAAAGGAAGGGGGAGCACTATAGCCGTTTTAGGATGTGGAATAAATGTGGTATATCCTACAGAGAATAAAAAGTTGAT
GGAGCAAATTGGAGAGGAAGGACTTTTGGTGTCTGAATATCCTCTTGACTATCCGCCCCTCTCTCAGAATTTTCCGCTGA
GGAACAGGATAATAAGCGGCCTTTCTCAGGGAGTAGTAGTGGTAGAGGCTGGGGCCAAAAGCGGTGCCTTGATAACTGCA
CAATTTGCTTTAGAACAGGGCAGGGAAGTTTTCGCGGTGCCCGGAAATGTCACAAGTGCATATAGTGCTGGAACGAATGA
CCTCATAAAACAAGGAGCAAAAATTGTAACACAGGTGGAGGATATTTTAGAAGAGTTTAGCTTCAGAGAAGACCTCAGAA
TGGCATTAACTGAAAATGAGGAACTATCTTTGACGGAGGATGAGAAGGTGGTGTACGAGTTTATTAAAGAGGCTCCTAGG
GATGTGGAAGAAATTTCTTATACTTTGAACATGAAAATGTCGAAATTGAACAGCATTTTGACCTCTCTCATGCTCAAAGG
TTTGATTGACAGGCTCCCTGGCAACAAATATACTAAAAAAATTTTTTGA

Upstream 100 bases:

>100_bases
CTTCCTCACCTTTTTAATATTTTGTTCTCCTTTATTTTATCACAGTTTTTGTATTATAATAAAGGTAAATTGAAGAAAGA
ATTTACAAAAGGTGATACAA

Downstream 100 bases:

>100_bases
TAATTACAAAAAACTTTGATATAATTATTAGTTGTTTTGGAGGTGTACTCATGGCAAAGTCTCTAGTTATTGTGGAATCT
CCTGCGAAGGCTAAAACTAT

Product: DNA uptake Rossmann fold nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MNREKVFKIWLSSVVGIGYKSYFQLMEFFKKAEEIYRAKEIDIFKATGKKNLTEKIVEAQKLNPFEYVERLQKLKVSVYT
LEEEEYPSILREIHNPPVVLYLKGRLNLKDKFSIAMVGSRKATYYGKQMAQKLSYDLSERGITVVSGLARGIDTYSHLGA
LKGRGSTIAVLGCGINVVYPTENKKLMEQIGEEGLLVSEYPLDYPPLSQNFPLRNRIISGLSQGVVVVEAGAKSGALITA
QFALEQGREVFAVPGNVTSAYSAGTNDLIKQGAKIVTQVEDILEEFSFREDLRMALTENEELSLTEDEKVVYEFIKEAPR
DVEEISYTLNMKMSKLNSILTSLMLKGLIDRLPGNKYTKKIF

Sequences:

>Translated_362_residues
MNREKVFKIWLSSVVGIGYKSYFQLMEFFKKAEEIYRAKEIDIFKATGKKNLTEKIVEAQKLNPFEYVERLQKLKVSVYT
LEEEEYPSILREIHNPPVVLYLKGRLNLKDKFSIAMVGSRKATYYGKQMAQKLSYDLSERGITVVSGLARGIDTYSHLGA
LKGRGSTIAVLGCGINVVYPTENKKLMEQIGEEGLLVSEYPLDYPPLSQNFPLRNRIISGLSQGVVVVEAGAKSGALITA
QFALEQGREVFAVPGNVTSAYSAGTNDLIKQGAKIVTQVEDILEEFSFREDLRMALTENEELSLTEDEKVVYEFIKEAPR
DVEEISYTLNMKMSKLNSILTSLMLKGLIDRLPGNKYTKKIF
>Mature_362_residues
MNREKVFKIWLSSVVGIGYKSYFQLMEFFKKAEEIYRAKEIDIFKATGKKNLTEKIVEAQKLNPFEYVERLQKLKVSVYT
LEEEEYPSILREIHNPPVVLYLKGRLNLKDKFSIAMVGSRKATYYGKQMAQKLSYDLSERGITVVSGLARGIDTYSHLGA
LKGRGSTIAVLGCGINVVYPTENKKLMEQIGEEGLLVSEYPLDYPPLSQNFPLRNRIISGLSQGVVVVEAGAKSGALITA
QFALEQGREVFAVPGNVTSAYSAGTNDLIKQGAKIVTQVEDILEEFSFREDLRMALTENEELSLTEDEKVVYEFIKEAPR
DVEEISYTLNMKMSKLNSILTSLMLKGLIDRLPGNKYTKKIF

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=280, Percent_Identity=41.0714285714286, Blast_Score=204, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40821; Mature: 40821

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREKVFKIWLSSVVGIGYKSYFQLMEFFKKAEEIYRAKEIDIFKATGKKNLTEKIVEAQ
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHH
KLNPFEYVERLQKLKVSVYTLEEEEYPSILREIHNPPVVLYLKGRLNLKDKFSIAMVGSR
CCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCC
KATYYGKQMAQKLSYDLSERGITVVSGLARGIDTYSHLGALKGRGSTIAVLGCGINVVYP
CHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEC
TENKKLMEQIGEEGLLVSEYPLDYPPLSQNFPLRNRIISGLSQGVVVVEAGAKSGALITA
CCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEE
QFALEQGREVFAVPGNVTSAYSAGTNDLIKQGAKIVTQVEDILEEFSFREDLRMALTENE
HHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELSLTEDEKVVYEFIKEAPRDVEEISYTLNMKMSKLNSILTSLMLKGLIDRLPGNKYTKK
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
IF
CC
>Mature Secondary Structure
MNREKVFKIWLSSVVGIGYKSYFQLMEFFKKAEEIYRAKEIDIFKATGKKNLTEKIVEAQ
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHH
KLNPFEYVERLQKLKVSVYTLEEEEYPSILREIHNPPVVLYLKGRLNLKDKFSIAMVGSR
CCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCC
KATYYGKQMAQKLSYDLSERGITVVSGLARGIDTYSHLGALKGRGSTIAVLGCGINVVYP
CHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEC
TENKKLMEQIGEEGLLVSEYPLDYPPLSQNFPLRNRIISGLSQGVVVVEAGAKSGALITA
CCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEE
QFALEQGREVFAVPGNVTSAYSAGTNDLIKQGAKIVTQVEDILEEFSFREDLRMALTENE
HHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELSLTEDEKVVYEFIKEAPRDVEEISYTLNMKMSKLNSILTSLMLKGLIDRLPGNKYTKK
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
IF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]