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The map label for this gene is CheD

Identifier: 20807861

GI number: 20807861

Start: 1394952

End: 1395440

Strand: Reverse

Name: CheD

Synonym: TTE1414

Alternate gene names: 20807861

Gene position: 1395440-1394952 (Counterclockwise)

Preceding gene: 20807862

Following gene: 20807860

Centisome position: 51.89

GC content: 40.49

Gene sequence:

>489_bases
ATGGAGAGCAAAATTCTTAGGGTTGGAATGGCGGATGCAAAAGTCACAAAGAGCCCGGGCATTTTGACTACAATTGGGCT
GGGGTCCTGTGTGGGGATTGTGCTTTACGACCCTATCGCAAAAGTTGCAGGACTTGTTCACATAATGTTGCCTTACAGCA
ATAAAATATCTGACAATTCTAATAAGCTGAAATTTGCTGATACTGGAATAGAGATTTTGATTGAAGAGATGTTGAAGGAA
GGAGCTAATCCGAAAAGGTTGATAAGCAAGTTAGCTGGAGGCGCGCAAATGTTTTCTTCAAAGATAAATTCTGACATCAT
GAACATAGGGGAAAGGAATGTAATCGCTACAAAGGAAGTGCTCAAAAAGCTCGGCATACCTATTGTAGCTGAGGATACAG
GTGGAAATTACGGAAGGACTATAGAATTTTATTCTGAAGACGGCAGACTTTTAGTAAAGACTATAGGCCATGGAGTCAAG
TACATTTAA

Upstream 100 bases:

>100_bases
CAGTTTGTAGAAGGAGAAAGGTTAATAAGAGGAGATTTTTTCCTGATACCTGATATAAACTCTTTTGATTTAATACTAAA
AGCGCTTGGAGTTGAAGTAA

Downstream 100 bases:

>100_bases
AATAAAAAACTGGGGGAATTCATATGTCAGTAGTGGAGGAGGATGTTTGGAAAGTTTACAACCTTCAAAAAGACCCTGAT
GCGAGAAATGAGATTATTGT

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MESKILRVGMADAKVTKSPGILTTIGLGSCVGIVLYDPIAKVAGLVHIMLPYSNKISDNSNKLKFADTGIEILIEEMLKE
GANPKRLISKLAGGAQMFSSKINSDIMNIGERNVIATKEVLKKLGIPIVAEDTGGNYGRTIEFYSEDGRLLVKTIGHGVK
YI

Sequences:

>Translated_162_residues
MESKILRVGMADAKVTKSPGILTTIGLGSCVGIVLYDPIAKVAGLVHIMLPYSNKISDNSNKLKFADTGIEILIEEMLKE
GANPKRLISKLAGGAQMFSSKINSDIMNIGERNVIATKEVLKKLGIPIVAEDTGGNYGRTIEFYSEDGRLLVKTIGHGVK
YI
>Mature_162_residues
MESKILRVGMADAKVTKSPGILTTIGLGSCVGIVLYDPIAKVAGLVHIMLPYSNKISDNSNKLKFADTGIEILIEEMLKE
GANPKRLISKLAGGAQMFSSKINSDIMNIGERNVIATKEVLKKLGIPIVAEDTGGNYGRTIEFYSEDGRLLVKTIGHGVK
YI

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_THETN (Q8RA16)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623032.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q8RA16
- SMR:   Q8RA16
- GeneID:   997874
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1414
- NMPDR:   fig|273068.3.peg.1379
- HOGENOM:   HBG531149
- OMA:   GGAAMFK
- ProtClustDB:   CLSK2392230
- BioCyc:   TTEN273068:TTE1414-MONOMER
- BRENDA:   3.5.1.44
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659
- InterPro:   IPR003730
- Gene3D:   G3DSA:3.60.140.10

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 17451; Mature: 17451

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKILRVGMADAKVTKSPGILTTIGLGSCVGIVLYDPIAKVAGLVHIMLPYSNKISDNS
CCCCEEEEECCCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NKLKFADTGIEILIEEMLKEGANPKRLISKLAGGAQMFSSKINSDIMNIGERNVIATKEV
CEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
LKKLGIPIVAEDTGGNYGRTIEFYSEDGRLLVKTIGHGVKYI
HHHHCCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MESKILRVGMADAKVTKSPGILTTIGLGSCVGIVLYDPIAKVAGLVHIMLPYSNKISDNS
CCCCEEEEECCCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NKLKFADTGIEILIEEMLKEGANPKRLISKLAGGAQMFSSKINSDIMNIGERNVIATKEV
CEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
LKKLGIPIVAEDTGGNYGRTIEFYSEDGRLLVKTIGHGVKYI
HHHHCCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336