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The map label for this gene is nrnA [H]

Identifier: 20807838

GI number: 20807838

Start: 1374116

End: 1375069

Strand: Reverse

Name: nrnA [H]

Synonym: TTE1391

Alternate gene names: 20807838

Gene position: 1375069-1374116 (Counterclockwise)

Preceding gene: 20807839

Following gene: 20807837

Centisome position: 51.13

GC content: 38.78

Gene sequence:

>954_bases
TTGATACTGATAGACGTAGTTAACGAAATAAAAAAGGCAGAAAGCGTAATTCTCCTTACACATGTAGCACCTGATGGAGA
TGCTATAGGGTCTGTCACTGGAATGTACAAAGTCTTAAAAAAGATGGGCAAGGACGTATCTGCTTTTATAGACGACCAGC
TGCCAGAGATGTACAGCTTCGTCCCAAATGTAGACAAGATATCCCGCCCTTTTGACAAAAAAGCAGACTTAGTGTTGATA
TTTGACTGTGCCGATGAAGAAAGGTTAGGGTCTTCAAAAGAATTCCTTGACAAAGGACCTATCACAGTCAATATTGACCA
TCATATTTCCAATACCCTTTACGCAAAGTTAAATTACGTAGACACAAACGCAGCTGCTACTGCCGAAATAGCTTATCAAT
TGGTGAAACTTCTCGGTATAGACTTTGATGAAGAGATAGCTACAAGTTTTTACACTGCTATTTTAACTGATACAGGTGGT
TTTACTTATGAGAGCACCACTTCTATGACTCATCACATAGCAGGAGACTTGATAAACAATGGGGCAAGGTTTAGAGAAGT
GGCAGAAAAAGTCTTTAATTCCCTCAAGTTCAACAAAGCGAAACTTTTAGGGAAAGCTTTAAACAGCCTTACTTTGTACA
AAGATGGCCTGGTTTCATATATGGAGATTTTGAAAAAGGATTTTGAAGAGACAGGAACAGATTTATCTCATTTAGAAAAC
ATAGTAAGCTATGGAAGAAACATTGAAGGAGTGGAAGTAGCAGTGCTCCTTGTAGAAAAAGAGGGTGAAGTGAAAGTAAG
CTTAAGGTCAAAGGAAAGAGTAGATGTAAACAAAATCGCCAGCACTTTTGGAGGAGGAGGGCATGTAAGGGCCTCTGGCT
GTACAATAGAGGGGACTATCGAAGAAGCAAAAGAGAAAATTCTTAAAGAAGTCTTTAAGGAGTTAGAAAAATGA

Upstream 100 bases:

>100_bases
ATACCCCGGAAATAATATTTGAACTGGATCACTCTATAGAATACGGCGCAAAAATTTCAGAAATTTTAAAAGAACTGAAC
AAACAAGAGGGTGATGACAA

Downstream 100 bases:

>100_bases
GTGTGGACGGCGTTTTAAATGTGCTAAAACCTCCTGGCATGACTTCTCACGATGTGGTGGATTTTATAAGAAAAATTTAC
GGTATAAAGAAAGTGGGCCA

Product: exopolyphosphatase-like protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MILIDVVNEIKKAESVILLTHVAPDGDAIGSVTGMYKVLKKMGKDVSAFIDDQLPEMYSFVPNVDKISRPFDKKADLVLI
FDCADEERLGSSKEFLDKGPITVNIDHHISNTLYAKLNYVDTNAAATAEIAYQLVKLLGIDFDEEIATSFYTAILTDTGG
FTYESTTSMTHHIAGDLINNGARFREVAEKVFNSLKFNKAKLLGKALNSLTLYKDGLVSYMEILKKDFEETGTDLSHLEN
IVSYGRNIEGVEVAVLLVEKEGEVKVSLRSKERVDVNKIASTFGGGGHVRASGCTIEGTIEEAKEKILKEVFKELEK

Sequences:

>Translated_317_residues
MILIDVVNEIKKAESVILLTHVAPDGDAIGSVTGMYKVLKKMGKDVSAFIDDQLPEMYSFVPNVDKISRPFDKKADLVLI
FDCADEERLGSSKEFLDKGPITVNIDHHISNTLYAKLNYVDTNAAATAEIAYQLVKLLGIDFDEEIATSFYTAILTDTGG
FTYESTTSMTHHIAGDLINNGARFREVAEKVFNSLKFNKAKLLGKALNSLTLYKDGLVSYMEILKKDFEETGTDLSHLEN
IVSYGRNIEGVEVAVLLVEKEGEVKVSLRSKERVDVNKIASTFGGGGHVRASGCTIEGTIEEAKEKILKEVFKELEK
>Mature_317_residues
MILIDVVNEIKKAESVILLTHVAPDGDAIGSVTGMYKVLKKMGKDVSAFIDDQLPEMYSFVPNVDKISRPFDKKADLVLI
FDCADEERLGSSKEFLDKGPITVNIDHHISNTLYAKLNYVDTNAAATAEIAYQLVKLLGIDFDEEIATSFYTAILTDTGG
FTYESTTSMTHHIAGDLINNGARFREVAEKVFNSLKFNKAKLLGKALNSLTLYKDGLVSYMEILKKDFEETGTDLSHLEN
IVSYGRNIEGVEVAVLLVEKEGEVKVSLRSKERVDVNKIASTFGGGGHVRASGCTIEGTIEEAKEKILKEVFKELEK

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 34985; Mature: 34985

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIDVVNEIKKAESVILLTHVAPDGDAIGSVTGMYKVLKKMGKDVSAFIDDQLPEMYSF
CEEHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VPNVDKISRPFDKKADLVLIFDCADEERLGSSKEFLDKGPITVNIDHHISNTLYAKLNYV
CCCHHHHCCCCCCCCCEEEEEECCCHHHCCCCHHHHCCCCEEEEECCHHCCEEEEEEEEE
DTNAAATAEIAYQLVKLLGIDFDEEIATSFYTAILTDTGGFTYESTTSMTHHIAGDLINN
ECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHC
GARFREVAEKVFNSLKFNKAKLLGKALNSLTLYKDGLVSYMEILKKDFEETGTDLSHLEN
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IVSYGRNIEGVEVAVLLVEKEGEVKVSLRSKERVDVNKIASTFGGGGHVRASGCTIEGTI
HHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCEEEECCCEEECHH
EEAKEKILKEVFKELEK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILIDVVNEIKKAESVILLTHVAPDGDAIGSVTGMYKVLKKMGKDVSAFIDDQLPEMYSF
CEEHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VPNVDKISRPFDKKADLVLIFDCADEERLGSSKEFLDKGPITVNIDHHISNTLYAKLNYV
CCCHHHHCCCCCCCCCEEEEEECCCHHHCCCCHHHHCCCCEEEEECCHHCCEEEEEEEEE
DTNAAATAEIAYQLVKLLGIDFDEEIATSFYTAILTDTGGFTYESTTSMTHHIAGDLINN
ECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHC
GARFREVAEKVFNSLKFNKAKLLGKALNSLTLYKDGLVSYMEILKKDFEETGTDLSHLEN
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IVSYGRNIEGVEVAVLLVEKEGEVKVSLRSKERVDVNKIASTFGGGGHVRASGCTIEGTI
HHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCEEEECCCEEECHH
EEAKEKILKEVFKELEK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]