| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is GdhA2 [H]
Identifier: 20807791
GI number: 20807791
Start: 1327193
End: 1328443
Strand: Direct
Name: GdhA2 [H]
Synonym: TTE1344
Alternate gene names: 20807791
Gene position: 1327193-1328443 (Clockwise)
Preceding gene: 20807790
Following gene: 20807792
Centisome position: 49.35
GC content: 41.09
Gene sequence:
>1251_bases ATGTCCACAGAATCATTAAATCCATTGGTAATTGCTCAAAAGCAAATAAAGAAAGCTTGTGACATTTTAGGAGTTGAGGA GTCAGTTTACGAGCTTTTGAAAGAGCCAATGAGAGTTCTGGAGGTTTCCATCCCTGTGCAAATGGACGATGGAAGCATAA AAGTCTTCAAGGGATATAGATCGCAGCACAACGATGCACTAGGTCCTACAAAAGGAGGAATAAGATTCCATCCGGATGTG ACTTTAGATGAAGTAAAAGCTTTATCCATGTGGATGACCTTTAAATGCGGAGTAGTAGGTCTTCCCTATGGCGGAGCTAA AGGTGGAGTGGTTGTAAATCCAAAAGAACTCTCCAATGATGAACTTCAGAGGCTGAGCAGGGGTTATATAAGGGCTATAG CAAGCATAATAGGACCTGAAAAAGACATACCAGCTCCTGATGTTGGAACAAACGCCCAGATTATGGCTTGGATGGTAGAT GAATACAATAAAATTGTGGGTTACAACAGCCCTGCTGTGATTACGGGAAAACCCCTCATTTACGGCGGTTCAAAAGGGAG AGTGGCAGCTACAGGCTACGGAGTTGCTCTAATGGCAAGGGAAGCAGTAAAACGTTTAAACATGGATTTTAAGGACTGTA CTGTAGCAATTCAGGGGTTTGGAAATGTTGGAAGCCATGCCGGTTTAAGTCTCCAGAGGTTAGGAGCTAAAATTATAGCA GTGAGCGATGTGTACGGAGGAATATACAATGAAAAAGGAATTGATGCAGAGAAGTTAGTAGAACATGTAAACAAAACAGG AACTGTGTGCAATTTTGAGGGAACCACTCCCATCACAAATGAAGAGCTTTTGACGATGAAGGTGGACATATTAGTGTTGG CAGCTTTAGAAAACCAGATTACCTCTGCTAATGCAAATGAAGTAAAGGCAAAGATAATATGTGAAGGTGCTAACGGACCC ACAACTCCAGAAGCCGACAAGATACTTTCTGAAAAAGGTGTTTTTGTAGTGCCTGATATACTTGCTAATTCTGGAGGAGT CATAGTCTCTTACTTTGAGTGGGTACAGAATTTGATGAACTATTACTGGACTGAGAAAGAAGTAGAAGAGAGGCAGGAAA TCATGATGGTAAATGCTTTTAACTCTATATATGATTTAGCACAGCAGTATAAAGTAGACATGAGAACTGCAGCCTACATG ATTTCAATAAAGAGAGTATATGAGGCCATGAAAGTCAGAGGTTGGCTGTAA
Upstream 100 bases:
>100_bases ACTTTTGAAAAACTGGAGAGCATCTGGGATGAATATGGCGTATATATTTCAAAGCAAGGCTAAAAATTTGATTTTAAAAT AAAGAATAGGAGGATGAAAA
Downstream 100 bases:
>100_bases AGACCTTCGTTGAAGGTCTCGGTTTGTTGACAAAATTAGAGAAGTGGCATTTTGTGTGTAAATGCGACTTGTTACAAAGC GGTAACAAAACTTAGCGAGC
Product: glutamate dehydrogenase/leucine dehydrogenase
Products: NA
Alternate protein names: NAD-GDH [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSTESLNPLVIAQKQIKKACDILGVEESVYELLKEPMRVLEVSIPVQMDDGSIKVFKGYRSQHNDALGPTKGGIRFHPDV TLDEVKALSMWMTFKCGVVGLPYGGAKGGVVVNPKELSNDELQRLSRGYIRAIASIIGPEKDIPAPDVGTNAQIMAWMVD EYNKIVGYNSPAVITGKPLIYGGSKGRVAATGYGVALMAREAVKRLNMDFKDCTVAIQGFGNVGSHAGLSLQRLGAKIIA VSDVYGGIYNEKGIDAEKLVEHVNKTGTVCNFEGTTPITNEELLTMKVDILVLAALENQITSANANEVKAKIICEGANGP TTPEADKILSEKGVFVVPDILANSGGVIVSYFEWVQNLMNYYWTEKEVEERQEIMMVNAFNSIYDLAQQYKVDMRTAAYM ISIKRVYEAMKVRGWL
Sequences:
>Translated_416_residues MSTESLNPLVIAQKQIKKACDILGVEESVYELLKEPMRVLEVSIPVQMDDGSIKVFKGYRSQHNDALGPTKGGIRFHPDV TLDEVKALSMWMTFKCGVVGLPYGGAKGGVVVNPKELSNDELQRLSRGYIRAIASIIGPEKDIPAPDVGTNAQIMAWMVD EYNKIVGYNSPAVITGKPLIYGGSKGRVAATGYGVALMAREAVKRLNMDFKDCTVAIQGFGNVGSHAGLSLQRLGAKIIA VSDVYGGIYNEKGIDAEKLVEHVNKTGTVCNFEGTTPITNEELLTMKVDILVLAALENQITSANANEVKAKIICEGANGP TTPEADKILSEKGVFVVPDILANSGGVIVSYFEWVQNLMNYYWTEKEVEERQEIMMVNAFNSIYDLAQQYKVDMRTAAYM ISIKRVYEAMKVRGWL >Mature_415_residues STESLNPLVIAQKQIKKACDILGVEESVYELLKEPMRVLEVSIPVQMDDGSIKVFKGYRSQHNDALGPTKGGIRFHPDVT LDEVKALSMWMTFKCGVVGLPYGGAKGGVVVNPKELSNDELQRLSRGYIRAIASIIGPEKDIPAPDVGTNAQIMAWMVDE YNKIVGYNSPAVITGKPLIYGGSKGRVAATGYGVALMAREAVKRLNMDFKDCTVAIQGFGNVGSHAGLSLQRLGAKIIAV SDVYGGIYNEKGIDAEKLVEHVNKTGTVCNFEGTTPITNEELLTMKVDILVLAALENQITSANANEVKAKIICEGANGPT TPEADKILSEKGVFVVPDILANSGGVIVSYFEWVQNLMNYYWTEKEVEERQEIMMVNAFNSIYDLAQQYKVDMRTAAYMI SIKRVYEAMKVRGWL
Specific function: Unknown
COG id: COG0334
COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]
Homologues:
Organism=Homo sapiens, GI31377775, Length=343, Percent_Identity=45.1895043731778, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI4885281, Length=343, Percent_Identity=45.1895043731778, Blast_Score=301, Evalue=1e-81, Organism=Escherichia coli, GI1788059, Length=361, Percent_Identity=33.5180055401662, Blast_Score=199, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17544676, Length=444, Percent_Identity=37.6126126126126, Blast_Score=278, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6324951, Length=417, Percent_Identity=31.4148681055156, Blast_Score=179, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6319256, Length=402, Percent_Identity=31.8407960199005, Blast_Score=172, Evalue=1e-43, Organism=Drosophila melanogaster, GI45549226, Length=341, Percent_Identity=44.8680351906158, Blast_Score=298, Evalue=5e-81, Organism=Drosophila melanogaster, GI45553475, Length=449, Percent_Identity=38.3073496659243, Blast_Score=298, Evalue=5e-81, Organism=Drosophila melanogaster, GI24649283, Length=369, Percent_Identity=41.4634146341463, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24649460, Length=280, Percent_Identity=44.6428571428571, Blast_Score=240, Evalue=1e-63,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006095 - InterPro: IPR006096 - InterPro: IPR006097 - InterPro: IPR014362 - InterPro: IPR016040 [H]
Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]
EC number: =1.4.1.2 [H]
Molecular weight: Translated: 45547; Mature: 45416
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00074 GLFV_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTESLNPLVIAQKQIKKACDILGVEESVYELLKEPMRVLEVSIPVQMDDGSIKVFKGYR CCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCEEECCCCEEEEECCH SQHNDALGPTKGGIRFHPDVTLDEVKALSMWMTFKCGVVGLPYGGAKGGVVVNPKELSND HCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHEEECCEEECCCCCCCCCEEECHHHCCHH ELQRLSRGYIRAIASIIGPEKDIPAPDVGTNAQIMAWMVDEYNKIVGYNSPAVITGKPLI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEEECCEEE YGGSKGRVAATGYGVALMAREAVKRLNMDFKDCTVAIQGFGNVGSHAGLSLQRLGAKIIA EECCCCCEEECCCHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCCCHHHCCCEEEE VSDVYGGIYNEKGIDAEKLVEHVNKTGTVCNFEGTTPITNEELLTMKVDILVLAALENQI EEHHHCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEHHHHEEHHHHHH TSANANEVKAKIICEGANGPTTPEADKILSEKGVFVVPDILANSGGVIVSYFEWVQNLMN CCCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEECHHHCCCCCEEEHHHHHHHHHHH YYWTEKEVEERQEIMMVNAFNSIYDLAQQYKVDMRTAAYMISIKRVYEAMKVRGWL HHCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STESLNPLVIAQKQIKKACDILGVEESVYELLKEPMRVLEVSIPVQMDDGSIKVFKGYR CCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCEEECCCCEEEEECCH SQHNDALGPTKGGIRFHPDVTLDEVKALSMWMTFKCGVVGLPYGGAKGGVVVNPKELSND HCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHEEECCEEECCCCCCCCCEEECHHHCCHH ELQRLSRGYIRAIASIIGPEKDIPAPDVGTNAQIMAWMVDEYNKIVGYNSPAVITGKPLI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEEECCEEE YGGSKGRVAATGYGVALMAREAVKRLNMDFKDCTVAIQGFGNVGSHAGLSLQRLGAKIIA EECCCCCEEECCCHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCCCCHHHCCCEEEE VSDVYGGIYNEKGIDAEKLVEHVNKTGTVCNFEGTTPITNEELLTMKVDILVLAALENQI EEHHHCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEHHHHEEHHHHHH TSANANEVKAKIICEGANGPTTPEADKILSEKGVFVVPDILANSGGVIVSYFEWVQNLMN CCCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEECHHHCCCCCEEEHHHHHHHHHHH YYWTEKEVEERQEIMMVNAFNSIYDLAQQYKVDMRTAAYMISIKRVYEAMKVRGWL HHCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA