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The map label for this gene is RpiR3 [C]

Identifier: 20807790

GI number: 20807790

Start: 1326292

End: 1327155

Strand: Direct

Name: RpiR3 [C]

Synonym: TTE1343

Alternate gene names: 20807790

Gene position: 1326292-1327155 (Clockwise)

Preceding gene: 20807789

Following gene: 20807791

Centisome position: 49.31

GC content: 37.04

Gene sequence:

>864_bases
ATGGGTAGAGCAGATGATTTGATAAAAAGGATACAGGACAACTATGCGAAGCTTTCTAAAAGCCAAAAGATAATTGCTGA
GTACATCATTAACCACTACGACAAAGCAGCTTTTATGACAGCAGCTAAACTTGGAGCTACTATAAATATAAGCGAGTCCA
CTGTTGTCAGATTTGCGAATGCTTTAGGGTATAATGGATATCCTGAACTGCAAAATGCACTCCAAGAGCTTATAAAAACT
AAATTGACTACTGTCCAAAGGCTAGAGATGACAGAAGAAAAAGATGAGATAGCTGTTTTAAATAACGTTTTAAAATCTGA
TATAGAAAACATAAAAGAGACTCTTCACGAGATAGATAAAGAAGATTTTAAAAAAGTCGTTTCAAAAATTCTGGAGGCTT
CTAAGATTTATATAGTCGCTTCTAGAAGCTCTATAGTAATTGCTGAATACCTGGCTTTTTACCTCAATCTAATTCGCGGA
AATGTCTCTGTTGTAAAGCCTGGAGTTTCAGACGTATTTGAGCAGATTTTAAGAGTTGGCGAAAATGACCTTGTAATAGG
TATAGGTTTTCCCAGGTATTCCAAGAGAACAGTAGAAGTATTAAAATACGCAAAAACTCAAAGGGCTAAAATTGTGGCTA
TCACAGACAGCTTAATTTCGCCTTTGACCTCTGTGGCAGATGAGGTTTTAATTGCTAAAAGCCACATGGCTTCTTTTGTG
GATTCTCTTGTGGCGCCTTTGAGCTTGGTCAATGCTCTTGTGGTAGCAGTGGGATTAAAAGAAAGGGAAAAAGTGGCTGA
TACTTTTGAAAAACTGGAGAGCATCTGGGATGAATATGGCGTATATATTTCAAAGCAAGGCTAA

Upstream 100 bases:

>100_bases
CTTTAGAAAAAGCTGTTTTAAAGAGAGTGCCGGCTGGCACAGAAGAACTTAACAGAAAAGCTTTAGAAGAGGGTTTTAAG
TTGGGGAAGGTGGAAGATAA

Downstream 100 bases:

>100_bases
AAATTTGATTTTAAAATAAAGAATAGGAGGATGAAAAATGTCCACAGAATCATTAAATCCATTGGTAATTGCTCAAAAGC
AAATAAAGAAAGCTTGTGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MGRADDLIKRIQDNYAKLSKSQKIIAEYIINHYDKAAFMTAAKLGATINISESTVVRFANALGYNGYPELQNALQELIKT
KLTTVQRLEMTEEKDEIAVLNNVLKSDIENIKETLHEIDKEDFKKVVSKILEASKIYIVASRSSIVIAEYLAFYLNLIRG
NVSVVKPGVSDVFEQILRVGENDLVIGIGFPRYSKRTVEVLKYAKTQRAKIVAITDSLISPLTSVADEVLIAKSHMASFV
DSLVAPLSLVNALVVAVGLKEREKVADTFEKLESIWDEYGVYISKQG

Sequences:

>Translated_287_residues
MGRADDLIKRIQDNYAKLSKSQKIIAEYIINHYDKAAFMTAAKLGATINISESTVVRFANALGYNGYPELQNALQELIKT
KLTTVQRLEMTEEKDEIAVLNNVLKSDIENIKETLHEIDKEDFKKVVSKILEASKIYIVASRSSIVIAEYLAFYLNLIRG
NVSVVKPGVSDVFEQILRVGENDLVIGIGFPRYSKRTVEVLKYAKTQRAKIVAITDSLISPLTSVADEVLIAKSHMASFV
DSLVAPLSLVNALVVAVGLKEREKVADTFEKLESIWDEYGVYISKQG
>Mature_286_residues
GRADDLIKRIQDNYAKLSKSQKIIAEYIINHYDKAAFMTAAKLGATINISESTVVRFANALGYNGYPELQNALQELIKTK
LTTVQRLEMTEEKDEIAVLNNVLKSDIENIKETLHEIDKEDFKKVVSKILEASKIYIVASRSSIVIAEYLAFYLNLIRGN
VSVVKPGVSDVFEQILRVGENDLVIGIGFPRYSKRTVEVLKYAKTQRAKIVAITDSLISPLTSVADEVLIAKSHMASFVD
SLVAPLSLVNALVVAVGLKEREKVADTFEKLESIWDEYGVYISKQG

Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788159, Length=284, Percent_Identity=23.5915492957746, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082130, Length=184, Percent_Identity=24.4565217391304, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31991; Mature: 31860

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRADDLIKRIQDNYAKLSKSQKIIAEYIINHYDKAAFMTAAKLGATINISESTVVRFAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH
ALGYNGYPELQNALQELIKTKLTTVQRLEMTEEKDEIAVLNNVLKSDIENIKETLHEIDK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EDFKKVVSKILEASKIYIVASRSSIVIAEYLAFYLNLIRGNVSVVKPGVSDVFEQILRVG
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCC
ENDLVIGIGFPRYSKRTVEVLKYAKTQRAKIVAITDSLISPLTSVADEVLIAKSHMASFV
CCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLVAPLSLVNALVVAVGLKEREKVADTFEKLESIWDEYGVYISKQG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCC
>Mature Secondary Structure 
GRADDLIKRIQDNYAKLSKSQKIIAEYIINHYDKAAFMTAAKLGATINISESTVVRFAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH
ALGYNGYPELQNALQELIKTKLTTVQRLEMTEEKDEIAVLNNVLKSDIENIKETLHEIDK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EDFKKVVSKILEASKIYIVASRSSIVIAEYLAFYLNLIRGNVSVVKPGVSDVFEQILRVG
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCC
ENDLVIGIGFPRYSKRTVEVLKYAKTQRAKIVAITDSLISPLTSVADEVLIAKSHMASFV
CCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLVAPLSLVNALVVAVGLKEREKVADTFEKLESIWDEYGVYISKQG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]