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The map label for this gene is yrrO [H]

Identifier: 20807706

GI number: 20807706

Start: 1256708

End: 1257931

Strand: Direct

Name: yrrO [H]

Synonym: TTE1257

Alternate gene names: 20807706

Gene position: 1256708-1257931 (Clockwise)

Preceding gene: 20807705

Following gene: 20807707

Centisome position: 46.73

GC content: 40.93

Gene sequence:

>1224_bases
ATGTTAGAGCTTTTGGCGCCAGTTGGAGATTTGGAAAGGCTAAAGGTTGCTGTAAAATACGGAGCAGATGCTGTTTACTT
TGGAGGACAAAATTACAGCTTAAGAGCCTATGTGGGGCTTACACTTGATGAGATAAAAGAGGGTGTTAGATATTTAAAAA
AAAGCAACAGAAAAGCCTATATCACCATAAATATTTTTCCCCACAATAAGGATTTAGAAGAGCTGCCGGAATACATTAAA
AAAGTTATAGACCTCGGAGTAGATGCTGTTATTGTCTCTGATTTGGGAGTTTTTTCTATAGTTAAGGAAATTGCTCCTGA
GATAGATGTACACATAAGCACTCAGGCTAATACTGTAAATTACTTGACTGCAAATTTCTGGCACAGATTAGGTGCAAAGA
GAATAATTTTAGCAAGAGAGCTTTCTTTAAAGGAAATAAAAGAGATAAGGGATAAGACGCCTCCTTCTTTAGAATTGGAG
GCTTTTGTGCACGGTGCTATGTGCATATCCTATTCAGGGCGATGCCTTTTGAGCAATTACCTGACAGGAAGAGACGCCAA
CAAAGGGGAATGTGCGCAGCCCTGCCGGTGGAAATATTACCTGATGGAAGAAAAAAGGCCGGGAGAGTATTTTCCTATTG
AAGAAGACGGGCGAGGCACTTATATTTTAAATTCAAAAGACCTGTGCATGATAGAGTACATTCCTCAATTGGTAGAAGCT
GGAGTTACAAGTTTTAAAATTGAGGGGAGAAACAAGAGCGCATATTACGTTGCGGTGGTTACACGGGCTTATAGGAAGGC
AATTGACGATTACCTTGAAAAAGGGAAGGATTACGTTTTTGACAGGAGCCTTCTTGAGGAAGTGGGGAAGGCAAGCCACA
GAGGATTTACCACAGGCTTTTATTTTGGCAGGCCGGGGGCAGATGCTCAAAATTATGAGTCTTCTAAGTACATCCGCACC
CATGACTTTGTGGGCATTGTCAAGAGATATGACCCTGAGACGAGGATAGCGATTGTGGAGCAGAGGAACAGAATGTTTGT
TGGGGATGAAGTGGAAGTTATAGGGCCTAAGGTTCAATTTAAGCAGAAAATTGAGAAGATGTGGGATGAGGAAGGAAGAG
AGATCGAAGTAGCTCCGCACCCCCAGATGATAGTGAAAATTCCTGTTGTTAATCCTGTTGAAGAGCTTTATATTTTAAGA
AGAGAATCTAAAAATAATGTTTAA

Upstream 100 bases:

>100_bases
GAGGGAGTTTATAGAAGTGTTGAAAAAGGACAAGAATTTTTACACGGTGATTTTGCCTTTAGGAGATGGGTTGGCTTTAA
GCATTAGGGAGGAGTGATTT

Downstream 100 bases:

>100_bases
AAAAGCTCCTTTTGGGAATACTGGTTCCTGAAAGGAGCTATTTTTATGGAGAAAAGGATAGTTTTTTTGCGTATAGTTTT
GGCCCTTATGATTTTTATAT

Product: collagenase-like protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MLELLAPVGDLERLKVAVKYGADAVYFGGQNYSLRAYVGLTLDEIKEGVRYLKKSNRKAYITINIFPHNKDLEELPEYIK
KVIDLGVDAVIVSDLGVFSIVKEIAPEIDVHISTQANTVNYLTANFWHRLGAKRIILARELSLKEIKEIRDKTPPSLELE
AFVHGAMCISYSGRCLLSNYLTGRDANKGECAQPCRWKYYLMEEKRPGEYFPIEEDGRGTYILNSKDLCMIEYIPQLVEA
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDRSLLEEVGKASHRGFTTGFYFGRPGADAQNYESSKYIRT
HDFVGIVKRYDPETRIAIVEQRNRMFVGDEVEVIGPKVQFKQKIEKMWDEEGREIEVAPHPQMIVKIPVVNPVEELYILR
RESKNNV

Sequences:

>Translated_407_residues
MLELLAPVGDLERLKVAVKYGADAVYFGGQNYSLRAYVGLTLDEIKEGVRYLKKSNRKAYITINIFPHNKDLEELPEYIK
KVIDLGVDAVIVSDLGVFSIVKEIAPEIDVHISTQANTVNYLTANFWHRLGAKRIILARELSLKEIKEIRDKTPPSLELE
AFVHGAMCISYSGRCLLSNYLTGRDANKGECAQPCRWKYYLMEEKRPGEYFPIEEDGRGTYILNSKDLCMIEYIPQLVEA
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDRSLLEEVGKASHRGFTTGFYFGRPGADAQNYESSKYIRT
HDFVGIVKRYDPETRIAIVEQRNRMFVGDEVEVIGPKVQFKQKIEKMWDEEGREIEVAPHPQMIVKIPVVNPVEELYILR
RESKNNV
>Mature_407_residues
MLELLAPVGDLERLKVAVKYGADAVYFGGQNYSLRAYVGLTLDEIKEGVRYLKKSNRKAYITINIFPHNKDLEELPEYIK
KVIDLGVDAVIVSDLGVFSIVKEIAPEIDVHISTQANTVNYLTANFWHRLGAKRIILARELSLKEIKEIRDKTPPSLELE
AFVHGAMCISYSGRCLLSNYLTGRDANKGECAQPCRWKYYLMEEKRPGEYFPIEEDGRGTYILNSKDLCMIEYIPQLVEA
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDRSLLEEVGKASHRGFTTGFYFGRPGADAQNYESSKYIRT
HDFVGIVKRYDPETRIAIVEQRNRMFVGDEVEVIGPKVQFKQKIEKMWDEEGREIEVAPHPQMIVKIPVVNPVEELYILR
RESKNNV

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=440, Percent_Identity=39.5454545454545, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI87081910, Length=323, Percent_Identity=35.6037151702786, Blast_Score=191, Evalue=8e-50,
Organism=Escherichia coli, GI1789548, Length=324, Percent_Identity=33.3333333333333, Blast_Score=171, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 46652; Mature: 46652

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLAPVGDLERLKVAVKYGADAVYFGGQNYSLRAYVGLTLDEIKEGVRYLKKSNRKAY
CCCCCCCCCCHHHHEEEEEECCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE
ITINIFPHNKDLEELPEYIKKVIDLGVDAVIVSDLGVFSIVKEIAPEIDVHISTQANTVN
EEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHCCHHHHHHHHCCCCEEEEECCCCEEH
YLTANFWHRLGAKRIILARELSLKEIKEIRDKTPPSLELEAFVHGAMCISYSGRCLLSNY
HHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHCCCCCEEHHHHHEEEEEEECCCCEEEECC
LTGRDANKGECAQPCRWKYYLMEEKRPGEYFPIEEDGRGTYILNSKDLCMIEYIPQLVEA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHC
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDRSLLEEVGKASHRGFTTGF
CCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCEEEE
YFGRPGADAQNYESSKYIRTHDFVGIVKRYDPETRIAIVEQRNRMFVGDEVEVIGPKVQF
EECCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEECCCHHH
KQKIEKMWDEEGREIEVAPHPQMIVKIPVVNPVEELYILRRESKNNV
HHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLELLAPVGDLERLKVAVKYGADAVYFGGQNYSLRAYVGLTLDEIKEGVRYLKKSNRKAY
CCCCCCCCCCHHHHEEEEEECCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE
ITINIFPHNKDLEELPEYIKKVIDLGVDAVIVSDLGVFSIVKEIAPEIDVHISTQANTVN
EEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHCCHHHHHHHHCCCCEEEEECCCCEEH
YLTANFWHRLGAKRIILARELSLKEIKEIRDKTPPSLELEAFVHGAMCISYSGRCLLSNY
HHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHCCCCCEEHHHHHEEEEEEECCCCEEEECC
LTGRDANKGECAQPCRWKYYLMEEKRPGEYFPIEEDGRGTYILNSKDLCMIEYIPQLVEA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHC
GVTSFKIEGRNKSAYYVAVVTRAYRKAIDDYLEKGKDYVFDRSLLEEVGKASHRGFTTGF
CCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCEEEE
YFGRPGADAQNYESSKYIRTHDFVGIVKRYDPETRIAIVEQRNRMFVGDEVEVIGPKVQF
EECCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEECCCHHH
KQKIEKMWDEEGREIEVAPHPQMIVKIPVVNPVEELYILRRESKNNV
HHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]