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The map label for this gene is Sbm3

Identifier: 20807690

GI number: 20807690

Start: 1239034

End: 1241238

Strand: Direct

Name: Sbm3

Synonym: TTE1238

Alternate gene names: NA

Gene position: 1239034-1241238 (Clockwise)

Preceding gene: 20807689

Following gene: 20807691

Centisome position: 46.07

GC content: 42.63

Gene sequence:

>2205_bases
ATGAAGCTGGAGAAAGATAAAAAGATTGACATAGAAGAGATTTTAAAAGGCCTTGACAAATATGTTCCTAGAAGAAGAGG
ATGGCACTGGAGGGAAGGGGTAGGAAGGCGCAAAATTGGAGATTTTGAGTATTACCAGGTCTCTGAGCCATTGAAAAATA
GCATTCCACTGCCTGCTGCAAAGTATTTTGGAAATATTGACCCGCAACCAGACTGCGTGATCACCACTGAAATTGCTTCA
GGAAGATTTGAAGACGACATAAGGCGAATGAGAATGGCGGCATGGCACGGTGCAGACCACATAATGGTGATAAGGACTTT
GGGGCAGAGCCATTTTGACGGATTGATAGAAGGAACTCCTGAGGGAGTGGGAGGAGTCCCAATCACCCGCAAACAAGTTA
GAGCGACGAGAAAAGCTCTTGATTTGATTGAGGATGAAGTAGGAAGACCTATAAATTTTCATTCATATGTCAGTGGAATT
GCAGGGCCTGAAATAGCTGTAATGTTTGCGGAAGAGGGAGTAAACGGCGCTCATCAGGACCCACAGTATAACGTTTTGTA
TAGAAATGTAAATATGGTTCGCTCTTTTGTGGATGCGGCAGTTGCCAAAAAGATTATGGCAGATGCTGACATGCTCCAAA
TTGACGGAGCTCACAACGCAAATGCGACTGCAAAATATGGATGGAAAGTAATGCCAGAACTTTTGGTGCAGCACGCTATA
AATACCATGTATTCTCTGAAAGTGGGAATGAAGCCTGAGAACATAGCTTTATCTACTGTGCCGCCAGATGCTCCGCCAGC
ACCCTGTATAAGGCTTGACCTTCCTTACGCGGTAGCCTTGAGGCAGCTTTTCAAAAATTACAAGATAAGGGCGCAGATGA
ATACCAAATACATTGAACACGATACAAGAGAGGCGACAGTTACACATGTTTTAAACCTTTTAATATCCCGCTTGACATCT
GCTGACATCCAAAGTACAATTACTCCCGATGAGGGAAGAAACGTTCCGTGGCATTACAACAATATAAACGCTATAAATAC
GGCCAAACAGGCATTGATTGGGATGGATGGCCTCAATGAAATGGTAAAACTCAATTTTGACGGAGAATTGGGGAAGAAAG
TAAGAGAGCTCAAGATGAGGGCAATACTTTTCATGGAAGAAATACTAGAAGTTGGTGGATATTTTAAAGCAGTGGAAGCA
GGATTTTTTGTAGATTCTGGCTATTATCCTGAGAGAAACGGTGATGGCATTGTAAGGACTATAAACGGAGGAATTGGAGC
TGGCACAGTGTATAAGAGAGATAAGGACTACATGGCCCCTGTATGCTCTCATTTTGGGTACAACAACCTGCCGGAAGGCC
TTAACAAGCCCTGTGATTTAATAGATGGATGCACTTTGTGCAAGAGAGAGAAGATTCAGTATATAGACGAACTGGACGAA
ACTGACAATGTGCACAATAGGTTAAAAGAGACGTTTGAATATAGAAAAGGAGACAAGATAAAACCTGAAGTTGAATGGGC
TGGAGATGGCGTAATAAGCATGAACCTCTTTTTGCCTGTGGATGAGAGGACTGCAGAATATGCTGCTATTAAGTACGCTG
AAAAATTAGGGCTTACTGATATAGCAGTTTTAAGTAAGCTTCCAATGCACCCTGCAGAGGGAACATATGTGGAAATAAGG
GGTCGTGTTCAGTTTGCCATTGATAAAAATGAGTTAGTAATTCCGCCTGAAGAGAAGATACTATCAGATGAGGAAATAGA
AGAAGACATAAAGAGAAAGCCAATGAAGGTTGTAGCGGCAACCGTAGGAAATGACGAACACTCTGTCGGTTTAAGGGAAA
TCCTGGATATAAAGCACGGGGGGATTGAGAAATACGGCATAAAAGTGGTATACCTGGGTACGTCAGTTCCTGTAGAAAAG
CTTGTAGATGCGGCAATAGAAGAAAACGCTGATGCCATTTTGGTGAGCACCATAATAACTCACGACGATGTGCACATCAA
AAACATGAAAAAAGTACACGACCTGTGTGTAGAAAAGGGCATAAGAGACAGAGTGATACTGGTAGGGGGAGGAACGCAGA
TTACAAACGATTTGGCTAAAAGCGTAGGATTTGATGCCGGATTTGGCAGGGGCACAAAAGGAAATCAGGTAGCAAGCTTT
TTAGTTAAAAGGAGAAGGGAAATGGAAAATGAAAAGGACAGTTGA

Upstream 100 bases:

>100_bases
GCAGAAAGAGCAAAAACAGACTATCTCACAGCAGGAAGAGGCCTTGCAAATGGCCAGTATCTAGATGTGTTGGATGAGAT
TGCAAGGGAGGCGAGAGAGA

Downstream 100 bases:

>100_bases
TGTTCTGGTAGCTGAGATTGGAAGTACAACTACAACTGTAAATGCTTTTAACTTAGAGGGCACACCGATCTTTCTAGGGC
AGGGCATGGCACCTACTACT

Product: methylmalonyl-CoA mutase C-terminal domain-containing protein

Products: NA

Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Lysine 5 6-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MKLEKDKKIDIEEILKGLDKYVPRRRGWHWREGVGRRKIGDFEYYQVSEPLKNSIPLPAAKYFGNIDPQPDCVITTEIAS
GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTPEGVGGVPITRKQVRATRKALDLIEDEVGRPINFHSYVSGI
AGPEIAVMFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKKIMADADMLQIDGAHNANATAKYGWKVMPELLVQHAI
NTMYSLKVGMKPENIALSTVPPDAPPAPCIRLDLPYAVALRQLFKNYKIRAQMNTKYIEHDTREATVTHVLNLLISRLTS
ADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLNEMVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEA
GFFVDSGYYPERNGDGIVRTINGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLIDGCTLCKREKIQYIDELDE
TDNVHNRLKETFEYRKGDKIKPEVEWAGDGVISMNLFLPVDERTAEYAAIKYAEKLGLTDIAVLSKLPMHPAEGTYVEIR
GRVQFAIDKNELVIPPEEKILSDEEIEEDIKRKPMKVVAATVGNDEHSVGLREILDIKHGGIEKYGIKVVYLGTSVPVEK
LVDAAIEENADAILVSTIITHDDVHIKNMKKVHDLCVEKGIRDRVILVGGGTQITNDLAKSVGFDAGFGRGTKGNQVASF
LVKRRREMENEKDS

Sequences:

>Translated_734_residues
MKLEKDKKIDIEEILKGLDKYVPRRRGWHWREGVGRRKIGDFEYYQVSEPLKNSIPLPAAKYFGNIDPQPDCVITTEIAS
GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTPEGVGGVPITRKQVRATRKALDLIEDEVGRPINFHSYVSGI
AGPEIAVMFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKKIMADADMLQIDGAHNANATAKYGWKVMPELLVQHAI
NTMYSLKVGMKPENIALSTVPPDAPPAPCIRLDLPYAVALRQLFKNYKIRAQMNTKYIEHDTREATVTHVLNLLISRLTS
ADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLNEMVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEA
GFFVDSGYYPERNGDGIVRTINGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLIDGCTLCKREKIQYIDELDE
TDNVHNRLKETFEYRKGDKIKPEVEWAGDGVISMNLFLPVDERTAEYAAIKYAEKLGLTDIAVLSKLPMHPAEGTYVEIR
GRVQFAIDKNELVIPPEEKILSDEEIEEDIKRKPMKVVAATVGNDEHSVGLREILDIKHGGIEKYGIKVVYLGTSVPVEK
LVDAAIEENADAILVSTIITHDDVHIKNMKKVHDLCVEKGIRDRVILVGGGTQITNDLAKSVGFDAGFGRGTKGNQVASF
LVKRRREMENEKDS
>Mature_734_residues
MKLEKDKKIDIEEILKGLDKYVPRRRGWHWREGVGRRKIGDFEYYQVSEPLKNSIPLPAAKYFGNIDPQPDCVITTEIAS
GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTPEGVGGVPITRKQVRATRKALDLIEDEVGRPINFHSYVSGI
AGPEIAVMFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKKIMADADMLQIDGAHNANATAKYGWKVMPELLVQHAI
NTMYSLKVGMKPENIALSTVPPDAPPAPCIRLDLPYAVALRQLFKNYKIRAQMNTKYIEHDTREATVTHVLNLLISRLTS
ADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLNEMVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEA
GFFVDSGYYPERNGDGIVRTINGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLIDGCTLCKREKIQYIDELDE
TDNVHNRLKETFEYRKGDKIKPEVEWAGDGVISMNLFLPVDERTAEYAAIKYAEKLGLTDIAVLSKLPMHPAEGTYVEIR
GRVQFAIDKNELVIPPEEKILSDEEIEEDIKRKPMKVVAATVGNDEHSVGLREILDIKHGGIEKYGIKVVYLGTSVPVEK
LVDAAIEENADAILVSTIITHDDVHIKNMKKVHDLCVEKGIRDRVILVGGGTQITNDLAKSVGFDAGFGRGTKGNQVASF
LVKRRREMENEKDS

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82130; Mature: 82130

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEKDKKIDIEEILKGLDKYVPRRRGWHWREGVGRRKIGDFEYYQVSEPLKNSIPLPAA
CCCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCCCEECCCHHHCCCCCCHH
KYFGNIDPQPDCVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTP
HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCCCCC
EGVGGVPITRKQVRATRKALDLIEDEVGRPINFHSYVSGIAGPEIAVMFAEEGVNGAHQD
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCC
PQYNVLYRNVNMVRSFVDAAVAKKIMADADMLQIDGAHNANATAKYGWKVMPELLVQHAI
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHH
NTMYSLKVGMKPENIALSTVPPDAPPAPCIRLDLPYAVALRQLFKNYKIRAQMNTKYIEH
HHHHEEEECCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCEEEEEECCHHHHC
DTREATVTHVLNLLISRLTSADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLNE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCC
MVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEAGFFVDSGYYPERNGDGIVRT
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCCCCEEEE
INGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLIDGCTLCKREKIQYIDELDE
ECCCCCCCCEEECCCHHHHHHHHHCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHHHHCCC
TDNVHNRLKETFEYRKGDKIKPEVEWAGDGVISMNLFLPVDERTAEYAAIKYAEKLGLTD
CHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCHH
IAVLSKLPMHPAEGTYVEIRGRVQFAIDKNELVIPPEEKILSDEEIEEDIKRKPMKVVAA
HHHHHHCCCCCCCCCEEEEEEEEEEEECCCCEECCCHHHHCCHHHHHHHHHHCCCEEEEE
TVGNDEHSVGLREILDIKHGGIEKYGIKVVYLGTSVPVEKLVDAAIEENADAILVSTIIT
ECCCCCCCHHHHHHHHHCCCCCEEECEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECC
HDDVHIKNMKKVHDLCVEKGIRDRVILVGGGTQITNDLAKSVGFDAGFGRGTKGNQVASF
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LVKRRREMENEKDS
HHHHHHHHCCCCCC
>Mature Secondary Structure
MKLEKDKKIDIEEILKGLDKYVPRRRGWHWREGVGRRKIGDFEYYQVSEPLKNSIPLPAA
CCCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCCCEECCCHHHCCCCCCHH
KYFGNIDPQPDCVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHFDGLIEGTP
HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCCCCC
EGVGGVPITRKQVRATRKALDLIEDEVGRPINFHSYVSGIAGPEIAVMFAEEGVNGAHQD
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCC
PQYNVLYRNVNMVRSFVDAAVAKKIMADADMLQIDGAHNANATAKYGWKVMPELLVQHAI
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCHHHHHHHHHHHHH
NTMYSLKVGMKPENIALSTVPPDAPPAPCIRLDLPYAVALRQLFKNYKIRAQMNTKYIEH
HHHHEEEECCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCEEEEEECCHHHHC
DTREATVTHVLNLLISRLTSADIQSTITPDEGRNVPWHYNNINAINTAKQALIGMDGLNE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCC
MVKLNFDGELGKKVRELKMRAILFMEEILEVGGYFKAVEAGFFVDSGYYPERNGDGIVRT
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCCCCEEEE
INGGIGAGTVYKRDKDYMAPVCSHFGYNNLPEGLNKPCDLIDGCTLCKREKIQYIDELDE
ECCCCCCCCEEECCCHHHHHHHHHCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHHHHCCC
TDNVHNRLKETFEYRKGDKIKPEVEWAGDGVISMNLFLPVDERTAEYAAIKYAEKLGLTD
CHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCHH
IAVLSKLPMHPAEGTYVEIRGRVQFAIDKNELVIPPEEKILSDEEIEEDIKRKPMKVVAA
HHHHHHCCCCCCCCCEEEEEEEEEEEECCCCEECCCHHHHCCHHHHHHHHHHCCCEEEEE
TVGNDEHSVGLREILDIKHGGIEKYGIKVVYLGTSVPVEKLVDAAIEENADAILVSTIIT
ECCCCCCCHHHHHHHHHCCCCCEEECEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECC
HDDVHIKNMKKVHDLCVEKGIRDRVILVGGGTQITNDLAKSVGFDAGFGRGTKGNQVASF
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LVKRRREMENEKDS
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA